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PDB: 27521 results

4BP7
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BU of 4bp7 by Molmil
Asymmetric structure of a virus-receptor complex
Descriptor: COAT PROTEIN
Authors:Dent, K.C, Thompson, R, Barker, A.M, Barr, J.N, Hiscox, J.A, Stockley, P.G, Ranson, N.A.
Deposit date:2013-05-23
Release date:2013-07-17
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (39 Å)
Cite:The Asymmetric Structure of an Icosahedral Virus Bound its Receptor Suggests a Mechanism for Genome Release.
Structure, 21, 2013
1IQ9
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crystal structure at 1.8 A of toxin a from Naja nigricollis venom
Descriptor: SULFATE ION, alpha-neurotoxin
Authors:Menez, R, Le Du, M.H, Menez, A.
Deposit date:2001-07-10
Release date:2003-11-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Motions and structural variability within toxins: Implication for their use as scaffolds for protein engineering
Protein Sci., 12, 2003
8YRL
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BU of 8yrl by Molmil
Crystal structure of Aspergillus fumigatus Galactofuranosylransferase (AfGfsA) in complex with UDP and galactofuranose
Descriptor: GLYCEROL, Glycosyltransferase family 31 protein, MANGANESE (II) ION, ...
Authors:Okuno, A, Oka, T, Chihara, Y, Hirata, R, Kadooka, C, Teramoto, T, Hira, D, Kakuta, Y.
Deposit date:2024-03-21
Release date:2024-10-30
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Substrate binding and catalytic mechanism of UDP-a-D-galactofuranose: beta-galactofuranoside beta-(1->5)-galactofuranosyltransferase GfsA
To Be Published
1IRX
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BU of 1irx by Molmil
Crystal structure of class I lysyl-tRNA synthetase
Descriptor: ZINC ION, lysyl-tRNA synthetase
Authors:Nureki, O, Terada, T, Ishitani, R, Ambrogelly, A, Ibba, M, Soll, D, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-10-25
Release date:2002-04-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Functional convergence of two lysyl-tRNA synthetases with unrelated topologies.
Nat.Struct.Biol., 9, 2002
3V0L
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BU of 3v0l by Molmil
Crystal structure of the Fucosylgalactoside alpha N-acetylgalactosaminyltransferase (GTA, cisAB mutant L266G, G268A) in complex with a novel UDP-Gal derived inhibitor (2GW)
Descriptor: 5-phenyl-uridine-5'-alpha-d-galactosyl-diphosphate, Histo-blood group ABO system transferase, MANGANESE (II) ION, ...
Authors:Palcic, M.M, Jorgensen, R.
Deposit date:2011-12-08
Release date:2013-01-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Base-modified Donor Analogues Reveal Novel Dynamic Features of a Glycosyltransferase.
J.Biol.Chem., 288, 2013
2GTJ
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BU of 2gtj by Molmil
Reduced form of ADAP hSH3-N-domain
Descriptor: FYN-binding protein
Authors:Zimmermann, J, Kuehne, R, Freund, C.
Deposit date:2006-04-28
Release date:2007-06-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Redox-Regulated Conformational Changes in an SH3 Domain
Biochemistry, 46, 2007
9CPB
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BU of 9cpb by Molmil
Atomic model of bovine Fallopian tube cilia doublet microtubule (48-nm periodicity)
Descriptor: Armadillo repeat containing 4, CFAP141, CFAP276, ...
Authors:Zeng, J, Sun, C, Zhang, R.
Deposit date:2024-07-18
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Structural diversity of axonemes across mammalian motile cilia
To Be Published
2YU6
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BU of 2yu6 by Molmil
Solution structure of the YTH domain in YTH domain-containing protein 2
Descriptor: YTH domain-containing protein 2
Authors:Endo, R, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the YTH domain in YTH domain-containing protein 2
To be Published
2YVM
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BU of 2yvm by Molmil
Crystal structure of NDX2 in complex with MG2+ from thermus thermophilus HB8
Descriptor: MAGNESIUM ION, MutT/nudix family protein
Authors:Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-02-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
3V0O
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BU of 3v0o by Molmil
Crystal structure of the Fucosylgalactoside alpha N-acetylgalactosaminyltransferase (GTA, cisAB mutant L266G, G268A) in complex with a novel UDP-GalNAc derived inhibitor (4GW) and H-antigen acceptor
Descriptor: 5-(5-formylthiophen-2-yl)uridine 5'-(trihydrogen diphosphate), Histo-blood group ABO system transferase, MANGANESE (II) ION, ...
Authors:Palcic, M.M, Jorgensen, R.
Deposit date:2011-12-08
Release date:2013-01-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Base-modified donor analogues reveal novel dynamic features of a glycosyltransferase.
J.Biol.Chem., 288, 2013
1IVO
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BU of 1ivo by Molmil
Crystal Structure of the Complex of Human Epidermal Growth Factor and Receptor Extracellular Domains.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Epidermal Growth Factor Receptor, ...
Authors:Ogiso, H, Ishitani, R, Nureki, O, Fukai, S, Yamanaka, M, Kim, J.H, Saito, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-03-28
Release date:2002-10-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structure of the Complex of Human Epidermal Growth Factor and Receptor Extracellular Domains.
Cell(Cambridge,Mass.), 110, 2002
4C0Y
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BU of 4c0y by Molmil
Cryo-EM reconstruction of empty enterovirus 71 in complex with a neutralizing antibody E18
Descriptor: FAB EV18 4 D6-1 F1 G9, VP1, VP2, ...
Authors:Plevka, P, Perera, R, Cardosa, J, Suksatu, A, Kuhn, R.J, Rossmann, M.G.
Deposit date:2013-08-08
Release date:2014-02-05
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Neutralizing Antibodies Can Initiate Genome Release from Human Enterovirus 71.
Proc.Natl.Acad.Sci.USA, 111, 2014
2YBX
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BU of 2ybx by Molmil
Crystal Structure of Human Phosphatidylinositol-5-phosphate 4-kinase type-2 alpha
Descriptor: PHOSPHATE ION, PHOSPHATIDYLINOSITOL-5-PHOSPHATE 4-KINASE TYPE-2 ALPHA
Authors:Tresaugues, L, Moche, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Ekblad, T, Flodin, S, Graslund, S, Karlberg, T, Kotenyova, T, Kouznetsova, E, Nyman, T, Persson, C, Schuler, H, Siponen, M.I, Thorsell, A.G, Wahlberg, E, Weigelt, J, Nordlund, P.
Deposit date:2011-03-30
Release date:2012-01-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Crystal Structure of Human Phosphatidylinositol-5-Phosphate 4-Kinase Type-2 Alpha
To be Published
4CBT
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BU of 4cbt by Molmil
Design, synthesis, and biological evaluation of potent and selective Class IIa HDAC inhibitors as a potential therapy for Huntington's disease
Descriptor: (1R,2R,3R)-2-[4-(5-fluoranylpyrimidin-2-yl)phenyl]-N-oxidanyl-3-phenyl-cyclopropane-1-carboxamide, HISTONE DEACETYLASE 4, ZINC ION
Authors:Burli, R.W, Luckhurst, C.A, Aziz, O, Matthews, K.L, Yates, D, Lyons, K.A, Beconi, M, McAllister, G, Breccia, P, Stott, A.J, Penrose, S.D, Wall, M, Lamers, M, Leonard, P, Mueller, I, Richardson, C.M, Jarvis, R, Stones, L, Hughes, S, Wishart, G, Haughan, A.F, O'Connell, C, Mead, T, McNeil, H, Vann, J, Mangette, J, Maillard, M, Beaumont, V, Munoz-Sanjuan, I, Dominguez, C.
Deposit date:2013-10-16
Release date:2013-12-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Design, synthesis, and biological evaluation of potent and selective class IIa histone deacetylase (HDAC) inhibitors as a potential therapy for Huntington's disease.
J. Med. Chem., 56, 2013
1IZ9
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BU of 1iz9 by Molmil
Crystal Structure of Malate Dehydrogenase from Thermus thermophilus HB8
Descriptor: MALATE DEHYDROGENASE
Authors:Hirose, R, Hasegawa, T, Yamano, A, Kuramitsu, S, Hamada, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-10-01
Release date:2002-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Malate Dehydrogenase from Thermus themrophilus HB8
To be published
4C55
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BU of 4c55 by Molmil
Crystal structure of serum-derived human IgG4 Fc
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, IG GAMMA-4 CHAIN C REGION, ...
Authors:Davies, A.M, Rispens, T, Ooijevaar-deHeer, P, Gould, H.J, Jefferis, R, Aalberse, R.C, Sutton, B.J.
Deposit date:2013-09-10
Release date:2013-11-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Determinants of Unique Properties of Human Igg4-Fc
J.Mol.Biol., 426, 2014
5QHM
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BU of 5qhm by Molmil
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of human FAM83B in complex with OX-145
Descriptor: 1,2-ETHANEDIOL, 1-methyl-3-oxidanyl-pyridine-2-thione, Protein FAM83B
Authors:Pinkas, D.M, Bufton, J.C, Fox, A.E, Talon, R, Krojer, T, Douangamath, A, Collins, P, Zhang, R, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Bullock, A.N.
Deposit date:2018-05-18
Release date:2018-12-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:PanDDA analysis group deposition of models with modelled events (e.g. bound ligands)
To Be Published
5QHZ
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BU of 5qhz by Molmil
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of human PARP14 Macrodomain 3 in complex with FMOPL000385a
Descriptor: 2-cyano-~{N}-cyclohexyl-ethanamide, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Schuller, M, Talon, R, Krojer, T, Brandao-Neto, J, Douangamath, A, Zhang, R, von Delft, F, Schuler, H, Kessler, B, Knapp, S, Bountra, C, Arrowsmith, C.H, Edwards, A, Elkins, J.
Deposit date:2018-05-21
Release date:2019-04-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:PanDDA analysis group deposition of models with modelled events (e.g. bound ligands)
To Be Published
2H57
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BU of 2h57 by Molmil
Crystal structure of human ADP-ribosylation factor-like 6
Descriptor: ADP-ribosylation factor-like protein 6, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Wang, J, Shen, Y, Tempel, W, Landry, R, Lew, J, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2006-05-25
Release date:2006-07-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of human ADP-ribosylation factor-like 6 (CASP Target)
TO BE PUBLISHED
4BXO
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BU of 4bxo by Molmil
Architecture and DNA recognition elements of the Fanconi anemia FANCM- FAAP24 complex
Descriptor: 5'-D(*GP*AP*TP*GP*AP*TP*GP*CP*TP*GP*CP)-3', 5'-D(*TP*CP*AP*GP*CP*AP*TP*CP*AP*TP*CP)-3', CALCIUM ION, ...
Authors:Coulthard, R, Deans, A, Swuec, P, Bowles, M, Purkiss, A, Costa, A, West, S, McDonald, N.
Deposit date:2013-07-15
Release date:2013-08-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Architecture and DNA Recognition Elements of the Fanconi Anemia Fancm-Faap24 Complex.
Structure, 21, 2013
5QHN
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BU of 5qhn by Molmil
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of human FAM83B in complex with FMOPL000622a
Descriptor: 1,2-ETHANEDIOL, Protein FAM83B, methyl (2~{S},4~{R})-1-(furan-2-ylcarbonyl)-4-oxidanyl-pyrrolidine-2-carboxylate
Authors:Pinkas, D.M, Bufton, J.C, Fox, A.E, Talon, R, Krojer, T, Douangamath, A, Collins, P, Zhang, R, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Bullock, A.N.
Deposit date:2018-05-18
Release date:2018-12-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:PanDDA analysis group deposition of models with modelled events (e.g. bound ligands)
To Be Published
4EMX
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BU of 4emx by Molmil
Crystal structure analysis of Human Serum Albumin in complex with chloride anions at cryogenic temperature
Descriptor: CHLORIDE ION, Serum albumin
Authors:Botti, H, Bonilla, L, Trajtenberg, F, Radi, R, Buschiazzo, A.
Deposit date:2012-04-12
Release date:2012-04-25
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:New insights on B factors in crystal structure analysis and crystallographic model refinement
to be published
5QHY
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BU of 5qhy by Molmil
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of human PARP14 Macrodomain 3 in complex with FMOPL000462a
Descriptor: CHLORIDE ION, DIMETHYL SULFOXIDE, Poly [ADP-ribose] polymerase 14, ...
Authors:Schuller, M, Talon, R, Krojer, T, Brandao-Neto, J, Douangamath, A, Zhang, R, von Delft, F, Schuler, H, Kessler, B, Knapp, S, Bountra, C, Arrowsmith, C.H, Edwards, A, Elkins, J.
Deposit date:2018-05-21
Release date:2019-04-10
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:PanDDA analysis group deposition of models with modelled events (e.g. bound ligands)
To Be Published
8RXK
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BU of 8rxk by Molmil
ComM helicase from Legionella pneumophila, coordinating dsDNA and AMP-PNP
Descriptor: Competence related protein ComM, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Poly-dA Poly-dC, ...
Authors:Talachia Rosa, L, Fronzes, R.
Deposit date:2024-02-07
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural insights into the mechanism of DNA branch migration during homologous recombination in bacteria.
Embo J., 2024
8RXS
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BU of 8rxs by Molmil
ComM helicase from Legionella pneumophila - Lon domain hexamer
Descriptor: Competence related protein ComM
Authors:Talachia Rosa, L, Fronzes, R.
Deposit date:2024-02-07
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural insights into the mechanism of DNA branch migration during homologous recombination in bacteria.
Embo J., 2024

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PDB entries from 2024-10-30

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