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PDB: 27201 results

4RQ2
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Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine (8-oxoG)and dCTP soaked with MnCl2 for 35 s
Descriptor: ACETATE ION, DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3'), ...
Authors:Vyas, R, Reed, A.J, Suo, Z.
Deposit date:2014-10-31
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography.
J.Am.Chem.Soc., 137, 2015
5MI9
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BU of 5mi9 by Molmil
Structure of the phosphomimetic mutant of the elongation factor EF-Tu T62E
Descriptor: Elongation factor Tu 1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Talavera, A, Hendrix, J, Versees, W, De Gieter, S, Castro-Roa, D, Jurenas, D, Van Nerom, K, Vandenberk, N, Barth, A, De Greve, H, Hofkens, J, Zenkin, N, Loris, R, Garcia-Pino, A.
Deposit date:2016-11-27
Release date:2017-12-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors.
Sci Adv, 4, 2018
4RRD
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BU of 4rrd by Molmil
N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Thr3AA (snapshot 4)
Descriptor: 3'-deoxy-3'-(L-threonylamino)adenosine, MAGNESIUM ION, Probable threonine--tRNA ligase 2
Authors:Ahmad, S, Muthukumar, S, Yerabham, A.S.K, Kamarthapu, V, Sankaranarayanan, R.
Deposit date:2014-11-06
Release date:2015-07-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
4RU0
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BU of 4ru0 by Molmil
The crystal structure of abc transporter permease from pseudomonas fluorescens group
Descriptor: 3,6,9,12,15-PENTAOXAHEPTADECANE, GLYCEROL, Putative branched-chain amino acid ABC transporter, ...
Authors:Wu, R, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-11-17
Release date:2014-11-26
Method:X-RAY DIFFRACTION (2.442 Å)
Cite:The crystal structure of abc transporter permease from pseudomonas fluorescens group
To be Published
4RRR
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BU of 4rrr by Molmil
K121M mutant of N-terminal editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi with L-Thr3AA
Descriptor: 3'-deoxy-3'-(L-threonylamino)adenosine, Threonine--tRNA ligase
Authors:Hussain, T, Kamarthapu, V, Sankaranarayanan, R.
Deposit date:2014-11-06
Release date:2015-07-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
5M8J
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BU of 5m8j by Molmil
Crystal structure of Eremococcus coleocola manganese transporter mutant H236A
Descriptor: Divalent metal cation transporter MntH
Authors:Manatschal, C, Ehrnstorfer, I.A, Arnold, F.M, Laederach, J, Dutzler, R.
Deposit date:2016-10-29
Release date:2017-01-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural and mechanistic basis of proton-coupled metal ion transport in the SLC11/NRAMP family.
Nat Commun, 8, 2017
5CYG
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BU of 5cyg by Molmil
Crystal Structure of isoform 2 of uridine phosphorylase from Schistosoma mansoni APO form
Descriptor: Putative uridine phosphorylase
Authors:Romanello, L, Torini, J.R, DeMarco, R, Pereira, H.M.
Deposit date:2015-07-30
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.017 Å)
Cite:Analysis of two Schistosoma mansoni uridine phosphorylases isoforms suggests the emergence of a protein with a non-canonical function.
Biochimie, 125, 2016
5M95
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BU of 5m95 by Molmil
STAPHYLOCOCCUS CAPITIS DIVALENT METAL ION TRANSPORTER (DMT) IN COMPLEX WITH MANGANESE
Descriptor: CAMELID ANTIBODY FRAGMENT, NANOBODY, Divalent metal cation transporter MntH, ...
Authors:Ehrnstorfer, I.A, Geertsma, E.R, Pardon, E, Steyaert, J, Dutzler, R.
Deposit date:2016-10-31
Release date:2016-11-30
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal Structure Of A Slc11 (Nramp) Transporter Reveals The Basis For Transition-Metal Ion Transport.
Nat.Struct.Mol.Biol., 21, 2014
3UBJ
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BU of 3ubj by Molmil
Influenza hemagglutinin from the 2009 pandemic in complex with ligand LSTa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Xu, R, Wilson, I.A.
Deposit date:2011-10-24
Release date:2011-11-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Characterization of the Hemagglutinin Receptor Specificity from the 2009 H1N1 Influenza Pandemic.
J.Virol., 86, 2012
5D1V
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BU of 5d1v by Molmil
Crystal Structure and Thermal Stability of Hemoglobin from Thermophilic Phototrophic Bacterium Chloroflexus aurantiacus
Descriptor: Globin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Fromme, R, Holl, M, Tang, J.K.
Deposit date:2015-08-04
Release date:2016-08-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal Structure and Thermal Stability of Hemoglobin from Thermophilic Phototrophic Bacterium Chloroflexus aurantiacus
To Be Published
4RV7
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BU of 4rv7 by Molmil
Characterization of an essential diadenylate cyclase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Diadenylate cyclase, HEXANE-1,6-DIOL, ...
Authors:Dickmanns, A, Neumann, P, Ficner, R.
Deposit date:2014-11-25
Release date:2015-01-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and Biochemical Analysis of the Essential Diadenylate Cyclase CdaA from Listeria monocytogenes.
J.Biol.Chem., 290, 2015
5MLR
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BU of 5mlr by Molmil
Plantago Major multifunctional oxidoreductase V150M mutant in complex with citral and NADP+
Descriptor: CHLORIDE ION, Geranaldehyde, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Fellows, R, Russo, C.M, Lee, S.G, Jez, J.M, Chisholm, J.D, Zubieta, C, Nanao, M.
Deposit date:2016-12-07
Release date:2018-08-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:A multisubstrate reductase from Plantago major: structure-function in the short chain reductase superfamily.
Sci Rep, 8, 2018
2OKT
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BU of 2okt by Molmil
Crystal structure of O-succinylbenzoic acid synthetase from Staphylococcus aureus, ligand-free form
Descriptor: O-succinylbenzoic acid synthetase
Authors:Patskovsky, Y, Toro, R, Malashkevich, V, Sauder, J.M, Ozyurt, S, Smith, D, Dickey, M, Maletic, M, Powell, A, Gheyi, T, Wasserman, S.R, Gerlt, J, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-01-17
Release date:2007-01-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Loss of quaternary structure is associated with rapid sequence divergence in the OSBS family.
Proc.Natl.Acad.Sci.USA, 111, 2014
5MM1
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BU of 5mm1 by Molmil
Dolichyl phosphate mannose synthase in complex with GDP and dolichyl phosphate mannose
Descriptor: Dolichol monophosphate mannose synthase, GUANOSINE-5'-DIPHOSPHATE, dolichyl phosphate mannose
Authors:Gandini, R, Reichenbach, T, Tan, T.C, Divne, C.
Deposit date:2016-12-08
Release date:2017-08-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for dolichylphosphate mannose biosynthesis.
Nat Commun, 8, 2017
4RXD
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BU of 4rxd by Molmil
T. Brucei Farnesyl Diphosphate Synthase Complexed with Risedronate
Descriptor: 1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID, Farnesyl pyrophosphate synthase, MAGNESIUM ION
Authors:Cao, R, Liu, Y.-L, Oldfield, E.
Deposit date:2014-12-10
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Farnesyl diphosphate synthase inhibitors with unique ligand-binding geometries.
ACS Med Chem Lett, 6, 2015
5MEK
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BU of 5mek by Molmil
Sulphotransferase-18 from Arabidopsis thaliana in complex with 3'-phosphoadenosine 5'-phosphate (PAP)
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-3'-5'-DIPHOSPHATE, Cytosolic sulfotransferase 18, ...
Authors:Hirschmann, F, Krause, F, Baruch, P, Chizhov, I, Mueller, J.W, Manstein, D.J, Papenbrock, J, Fedorov, R.
Deposit date:2016-11-15
Release date:2017-07-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural and biochemical studies of sulphotransferase 18 from Arabidopsis thaliana explain its substrate specificity and reaction mechanism.
Sci Rep, 7, 2017
4RXY
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BU of 4rxy by Molmil
Crystal Structure of the Beta Carbonic Anhydrase psCA3 isolated from Pseudomonas aeruginosa
Descriptor: Carbonic anhydrase, GLYCEROL, ZINC ION
Authors:Pinard, M.A, Mckenna, R.
Deposit date:2014-12-12
Release date:2015-06-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Structure and inhibition studies of a type II beta-carbonic anhydrase psCA3 from Pseudomonas aeruginosa.
Bioorg.Med.Chem., 23, 2015
4RYK
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BU of 4ryk by Molmil
Crystal structure of a putative transcriptional regulator from Listeria monocytogenes EGD-e
Descriptor: DI(HYDROXYETHYL)ETHER, L(+)-TARTARIC ACID, Lmo0325 protein, ...
Authors:Filippova, E.V, Wawrzak, Z, Minasov, G, Kiryukhina, O, Jedrzejczak, R, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-12-15
Release date:2015-01-07
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of a putative transcriptional regulator from Listeria monocytogenes EGD-e
To be Published
5D56
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BU of 5d56 by Molmil
In meso in situ serial X-ray crystallography structure of diacylglycerol kinase, DgkA, at 100 K
Descriptor: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, ACETATE ION, CITRATE ANION, ...
Authors:Huang, C.-Y, Howe, N, Olieric, V, Warshamanage, R, Diederichs, K, Wang, M, Caffrey, M.
Deposit date:2015-08-10
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:In meso in situ serial X-ray crystallography of soluble and membrane proteins at cryogenic temperatures.
Acta Crystallogr D Struct Biol, 72, 2016
5MF0
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BU of 5mf0 by Molmil
Crystal structure of Smad4-MH1 bound to the GGCCG site.
Descriptor: CHLORIDE ION, DNA (5'-D(P*AP*CP*GP*GP*GP*CP*CP*GP*CP*GP*GP*CP*CP*CP*GP*T)-3'), MH1 domain of human Smad4, ...
Authors:Kaczmarska, Z, Freier, R, Marquez, J.A, Macias, M.J.
Deposit date:2016-11-16
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Structural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors.
Nat Commun, 8, 2017
5MF9
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BU of 5mf9 by Molmil
Solution structure of the RBM5 OCRE domain in complex with polyproline SmN peptide.
Descriptor: RNA-binding protein 5, Survival motor neuron protein
Authors:Mourao, A, Sattler, M, Bonnal, S, Komal, S, Warner, L, Bordonne, R, Valcarcel, J.
Deposit date:2016-11-17
Release date:2016-12-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for the recognition ofspliceosomal SmN B B proteins by theRBM5 OCRE domain in splicing regulation
Elife, 5, 2016
4RZP
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BU of 4rzp by Molmil
Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium (NESG) Target OR366.
Descriptor: Engineered Protein OR366
Authors:Vorobiev, S, Parmeggiani, F, Dimaio, F, Seetharaman, J, Sahdev, S, Xiao, R, Kogan, S, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2014-12-23
Release date:2015-01-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Crystal Structure of Engineered Protein OR366
To be Published
4S1E
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BU of 4s1e by Molmil
Crystal structure of cyclophilin mutant L120A from Leishmania donovani at 2.22 angstrom.
Descriptor: Peptidyl-prolyl cis-trans isomerase
Authors:Roy, S, Datta, A.K, Banerjee, R.
Deposit date:2015-01-13
Release date:2015-03-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Characterization and prediction of thermal stability of cyclophilin mutants from L.donovani
To be Published
4S1J
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BU of 4s1j by Molmil
Crystal structure of cyclophilin mutant V33A from Leishmania donovani at 2.3 angstrom.
Descriptor: Peptidyl-prolyl cis-trans isomerase
Authors:Roy, S, Datta, A.K, Banerjee, R.
Deposit date:2015-01-14
Release date:2015-03-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Characterization and prediction of thermal stability of cyclophilin mutants from L.donovani
To be Published
4RZQ
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Structural Analysis of Substrate, Reaction Intermediate and Product Binding in Haemophilus influenzae Biotin Carboxylase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Biotin carboxylase, methyl (3aS,4S,6aR)-4-(5-methoxy-5-oxopentyl)-2-oxohexahydro-1H-thieno[3,4-d]imidazole-1-carboxylate
Authors:Broussard, T.C, Pakhomova, S, Neau, D.B, Champion, T.S, Bonnot, R, Waldrop, G.L.
Deposit date:2014-12-23
Release date:2015-06-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural Analysis of Substrate, Reaction Intermediate, and Product Binding in Haemophilus influenzae Biotin Carboxylase.
Biochemistry, 54, 2015

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數據於2024-07-17公開中

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