Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27201 results

8OJE
DownloadVisualize
BU of 8oje by Molmil
Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 in complex with L-malate
Descriptor: (2S)-2-hydroxybutanedioic acid, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Haesaerts, S, Loris, R, Larsen, P.B.
Deposit date:2023-03-24
Release date:2023-05-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.142399 Å)
Cite:Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants
To Be Published
8KFP
DownloadVisualize
BU of 8kfp by Molmil
Solution structure of Drosophila melanogaster R2D2 dsRBD1
Descriptor: R2D2
Authors:Aute, R, Deshmukh, M.V.
Deposit date:2023-08-16
Release date:2024-06-26
Method:SOLUTION NMR
Cite:Key arginine residues in R2D2 dsRBD1 and dsRBD2 lead the siRNA recognition in Drosophila melanogaster RNAi pathway.
Biophys.Chem., 310, 2024
1O7A
DownloadVisualize
BU of 1o7a by Molmil
Human beta-Hexosaminidase B
Descriptor: 1,2-ETHANEDIOL, 2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Maier, T, Strater, N, Schuette, C, Klingenstein, R, Sandhoff, K, Saenger, W.
Deposit date:2002-10-29
Release date:2003-10-23
Last modified:2020-11-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The X-Ray Crystal Structure of Human Beta-Hexosaminidase B Provides New Insights Into Sandhoff Disease
J.Mol.Biol., 328, 2003
6ZQD
DownloadVisualize
BU of 6zqd by Molmil
Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Post-A1
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ...
Authors:Cheng, J, Lau, B, Venuta, G.L, Berninghausen, O, Hurt, E, Beckmann, R.
Deposit date:2020-07-09
Release date:2020-09-23
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:90 S pre-ribosome transformation into the primordial 40 S subunit.
Science, 369, 2020
8OJF
DownloadVisualize
BU of 8ojf by Molmil
Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 with bound phosphate
Descriptor: CHLORIDE ION, PHOSPHATE ION, Phosphoenolpyruvate carboxylase 1
Authors:Haesaerts, S, Loris, R, Larsen, P.B.
Deposit date:2023-03-24
Release date:2023-05-31
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (3.03683758 Å)
Cite:Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants
To Be Published
7A5I
DownloadVisualize
BU of 7a5i by Molmil
Structure of the human mitoribosome with A- P-and E-site mt-tRNAs
Descriptor: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
Authors:Desai, N, Yang, H, Chandrasekaran, V, Kazi, R, Minczuk, M, Ramakrishnan, V.
Deposit date:2020-08-21
Release date:2020-12-23
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Elongational stalling activates mitoribosome-associated quality control.
Science, 370, 2020
8OMJ
DownloadVisualize
BU of 8omj by Molmil
hKHK-C in complex with cpd 37
Descriptor: Ketohexokinase, SULFATE ION, [3-[[6-[(3~{a}~{R},6~{a}~{S})-2,3,3~{a},4,6,6~{a}-hexahydro-1~{H}-pyrrolo[3,4-c]pyrrol-5-yl]-3-cyano-4-(trifluoromethyl)pyridin-2-yl]amino]-4-methylsulfanyl-phenyl]methoxy-methyl-phosphinic acid
Authors:Pautsch, A, Ebenhoch, R.
Deposit date:2023-03-31
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.978 Å)
Cite:Discovery of BI-9787, a Potent Zwitterionic KHK-Inhibitor with Oral Bioavailability
To Be Published
6ZR7
DownloadVisualize
BU of 6zr7 by Molmil
X-ray structure of human Dscam Ig7-Ig9
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Down syndrome cell adhesion molecule, ...
Authors:Kozak, S, Bento, I, Meijers, R.
Deposit date:2020-07-11
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Homogeneously N-glycosylated proteins derived from the GlycoDelete HEK293 cell line enable diffraction-quality crystallogenesis.
Acta Crystallogr D Struct Biol, 76, 2020
8PDJ
DownloadVisualize
BU of 8pdj by Molmil
The phosphatase and C2 domains of SHIP1 with covalent Z56948267
Descriptor: 4-azanyl-3-fluoranyl-benzenethiol, DIMETHYL SULFOXIDE, Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1
Authors:Bradshaw, W.J, Moreira, T, Pascoa, T.C, Bountra, C, Chalk, R, von Delft, F, Brennan, P.E, Gileadi, O.
Deposit date:2023-06-12
Release date:2023-06-28
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Regulation of inositol 5-phosphatase activity by the C2 domain of SHIP1 and SHIP2.
Structure, 32, 2024
6ZRU
DownloadVisualize
BU of 6zru by Molmil
Crystal structure of SARS CoV2 main protease in complex with inhibitor Boceprevir
Descriptor: DIMETHYL SULFOXIDE, Main Protease, boceprevir (bound form)
Authors:Oerlemans, R, Wang, W, Lunev, S, Domling, A, Groves, M.R.
Deposit date:2020-07-14
Release date:2020-08-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Repurposing the HCV NS3-4A protease drug boceprevir as COVID-19 therapeutics.
Rsc Med Chem, 12, 2020
8PDH
DownloadVisualize
BU of 8pdh by Molmil
The phosphatase and C2 domains of SHIP1 with covalent Z1742148362
Descriptor: (5-phenyl-1,3,4-oxadiazol-2-yl)methanimine, 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, ...
Authors:Bradshaw, W.J, Moreira, T, Pascoa, T.C, Bountra, C, Chalk, R, von Delft, F, Brennan, P.E, Gileadi, O.
Deposit date:2023-06-12
Release date:2023-06-28
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Regulation of inositol 5-phosphatase activity by the C2 domain of SHIP1 and SHIP2.
Structure, 32, 2024
8PE9
DownloadVisualize
BU of 8pe9 by Molmil
Complex between DDR1 DS-like domain and PRTH-101 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Liu, J, Chiang, H, Xiong, W, Laurent, V, Griffiths, S.C, Duelfer, J, Deng, H, Sun, X, Yin, Y.W, Li, W, Audoly, L.P, An, Z, Schuerpf, T, Li, R, Zhang, N.
Deposit date:2023-06-13
Release date:2023-06-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.152 Å)
Cite:A highly selective humanized DDR1 mAb reverses immune exclusion by disrupting collagen fiber alignment in breast cancer.
J Immunother Cancer, 11, 2023
8PDG
DownloadVisualize
BU of 8pdg by Molmil
The phosphatase and C2 domains of SHIP1 with covalent Z2738285202
Descriptor: DIMETHYL SULFOXIDE, Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1, ~{N}-(8-chloranylquinolin-2-yl)propanamide
Authors:Bradshaw, W.J, Moreira, T, Scacioc, A, Bountra, C, Chalk, R, von Delft, F, Brennan, P.E, Gileadi, O.
Deposit date:2023-06-12
Release date:2023-06-28
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Regulation of inositol 5-phosphatase activity by the C2 domain of SHIP1 and SHIP2.
Structure, 32, 2024
8OVI
DownloadVisualize
BU of 8ovi by Molmil
BRICHOS monomer
Descriptor: Pulmonary surfactant-associated protein C (Fragment)
Authors:Ghosh, D, Torres, F, Guentert, P, Riek, R.
Deposit date:2023-04-26
Release date:2024-06-26
Method:SOLUTION NMR
Cite:The inhibitory action of the chaperone BRICHOS against the alpha-Synuclein secondary nucleation pathway at near-atomic resolution
To Be Published
6RP9
DownloadVisualize
BU of 6rp9 by Molmil
Crystal structure of the T-cell receptor NYE_S3 bound to HLA A2*01-SLLMWITQV
Descriptor: Beta-2-microglobulin, Cancer/testis antigen 1, HLA class I histocompatibility antigen, ...
Authors:Coles, C.H, Mulvaney, R, Malla, S, Lloyd, A, Smith, K, Chester, F, Knox, A, Stacey, A.R, Dukes, J, Baston, E, Griffin, S, Vuidepot, A, Jakobsen, B.K, Harper, S.
Deposit date:2019-05-14
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:TCRs with Distinct Specificity Profiles Use Different Binding Modes to Engage an Identical Peptide-HLA Complex.
J Immunol., 204, 2020
8OFG
DownloadVisualize
BU of 8ofg by Molmil
Streptococcus pneumoniae CdaA in complex with c-di-amp
Descriptor: ADENOSINE MONOPHOSPHATE, Diadenylate cyclase, GLU-ARG-LEU-LEU-GLY-GLY-TRP-LYS, ...
Authors:Garbers, T.B, Neumann, P, Ficner, R.
Deposit date:2023-03-15
Release date:2023-06-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Streptococcus pneumoniae CdaA in complex with c-di-amp
To Be Published
6RPB
DownloadVisualize
BU of 6rpb by Molmil
Crystal structure of the T-cell receptor NYE_S1 bound to HLA A2*01-SLLMWITQV
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
Authors:Coles, C.H, Mulvaney, R, Malla, S, Lloyd, A, Smith, K, Chester, F, Knox, A, Stacey, A.R, Dukes, J, Baston, E, Griffin, S, Vuidepot, A, Jakobsen, B.K, Harper, S.
Deposit date:2019-05-14
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:TCRs with Distinct Specificity Profiles Use Different Binding Modes to Engage an Identical Peptide-HLA Complex.
J Immunol., 204, 2020
8OFH
DownloadVisualize
BU of 8ofh by Molmil
Streptococcus pneumoniae CdaA
Descriptor: Diadenylate cyclase
Authors:Garbers, T.B, Neumann, P, Ficner, R.
Deposit date:2023-03-15
Release date:2023-06-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Streptococcus pneumoniae CdaA
To Be Published
8OFO
DownloadVisualize
BU of 8ofo by Molmil
Structure of Enterococcus faecium CdaA
Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, Diadenylate cyclase
Authors:Garbers, T.B, Neumann, P, Ficner, R.
Deposit date:2023-03-16
Release date:2023-06-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of Enterococcus faecium CdaA
To Be Published
8OFJ
DownloadVisualize
BU of 8ofj by Molmil
Mycoplasma pneumoniae CdaM
Descriptor: Diadenylate cyclase
Authors:Garbers, T.B, Neumann, P, Ficner, R.
Deposit date:2023-03-15
Release date:2023-06-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Streptococcus pneumoniae CdaA
To Be Published
1XKE
DownloadVisualize
BU of 1xke by Molmil
Solution structure of the second Ran-binding domain from human RanBP2
Descriptor: Ran-binding protein 2
Authors:Geyer, J.P, Doeker, R, Kremer, W, Zhao, X, Kuhlmann, J, Kalbitzer, H.R.
Deposit date:2004-09-28
Release date:2005-04-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Ran-binding domain 2 of RanBP2 and its interaction with the C terminus of Ran.
J.Mol.Biol., 348, 2005
8OPN
DownloadVisualize
BU of 8opn by Molmil
Human Coronavirus HKU1 spike glycoprotein in complex with an alpha2,8-linked 9-O-acetylated disialoside (1-up state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-8)-N-acetyl-alpha-neuraminic acid, ...
Authors:Pronker, M.F, Creutznacher, R, Hurdiss, D.L.
Deposit date:2023-04-07
Release date:2023-08-02
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Sialoglycan binding triggers spike opening in a human coronavirus.
Nature, 624, 2023
8OPO
DownloadVisualize
BU of 8opo by Molmil
Human Coronavirus HKU1 spike glycoprotein in complex with an alpha2,8-linked 9-O-acetylated disialoside (3-up state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-8)-N-acetyl-alpha-neuraminic acid, ...
Authors:Pronker, M.F, Creutznacher, R, Hurdiss, D.L.
Deposit date:2023-04-07
Release date:2023-08-02
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Sialoglycan binding triggers spike opening in a human coronavirus.
Nature, 624, 2023
8OPM
DownloadVisualize
BU of 8opm by Molmil
Human Coronavirus HKU1 spike glycoprotein in complex with an alpha2,8-linked 9-O-acetylated disialoside (closed state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-8)-N-acetyl-alpha-neuraminic acid, ...
Authors:Pronker, M.F, Creutznacher, R, Hurdiss, D.L.
Deposit date:2023-04-07
Release date:2023-08-02
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Sialoglycan binding triggers spike opening in a human coronavirus.
Nature, 624, 2023
5EY7
DownloadVisualize
BU of 5ey7 by Molmil
Crystal structure of Fructokinase from Vibrio cholerae O395 in apo form
Descriptor: Fructokinase, SODIUM ION
Authors:Paul, R, Nath, S, Sen, U.
Deposit date:2015-11-24
Release date:2016-11-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.461 Å)
Cite:Crystal structure of Fructokinase from Vibrio cholerae O395 in apo form
To Be Published

222624

數據於2024-07-17公開中

PDB statisticsPDBj update infoContact PDBjnumon