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PDB: 27265 results

6EHT
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Modulation of PCNA sliding surface by p15PAF suggests a suppressive mechanism for cisplatin-induced DNA lesion bypass by pol eta holoenzyme
Descriptor: DNA (5'-D(P*AP*TP*AP*CP*GP*AP*TP*GP*GP*G)-3'), DNA (5'-D(P*CP*CP*CP*AP*TP*CP*GP*TP*AP*T)-3'), PCNA-associated factor, ...
Authors:De March, M, Barrera-Vilarmau, S, Mentegari, E, Merino, N, Bressan, E, Maga, G, Crehuet, R, Onesti, S, Blanco, F.J, De Biasio, A.
Deposit date:2017-09-15
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:p15PAF binding to PCNA modulates the DNA sliding surface.
Nucleic Acids Res., 46, 2018
1WXF
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E.coli NAD Synthetase
Descriptor: NH(3)-dependent NAD(+) synthetase
Authors:Jauch, R, Humm, A, Huber, R, Wahl, M.C.
Deposit date:2005-01-23
Release date:2005-02-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Escherichia coli NAD Synthetase with Substrates and Products Reveal Mechanistic Rearrangements
J.Biol.Chem., 280, 2005
1TZA
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BU of 1tza by Molmil
X-ray structure of Northeast Structural Genomics Consortium target SoR45
Descriptor: CACODYLATE ION, apaG protein
Authors:Kuzin, A.P, Vorobiev, S.M, Edstrom, W, Acton, T.B, Shastry, R, Ma, L.-C, Cooper, B, Xiao, R, Montelione, G, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2004-07-09
Release date:2004-07-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray structure of Northeast Structural Genomics Consortium target SoR45
To be Published
4LX4
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BU of 4lx4 by Molmil
Crystal Structure Determination of Pseudomonas stutzeri endoglucanase Cel5A using a Twinned Data Set
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endoglucanase(Endo-1,4-beta-glucanase)protein
Authors:Dutoit, R, Delsaute, M, Berlemont, R, Van Elder, D, Galleni, M, Bauvois, C.
Deposit date:2013-07-29
Release date:2014-07-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.556 Å)
Cite:Crystal structure determination of Pseudomonas stutzeri A1501 endoglucanase Cel5A: the search for a molecular basis for glycosynthesis in GH5_5 enzymes.
Acta Crystallogr D Struct Biol, 75, 2019
6EG2
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Crystal structure of human BRM in complex with compound 16
Descriptor: ISOPROPYL ALCOHOL, Maltose/maltodextrin-binding periplasmic protein,Probable global transcription activator SNF2L2, N-(5-amino-2-chloropyridin-4-yl)-N'-(4-bromo-3-{[3-(hydroxymethyl)phenyl]ethynyl}-1,2-thiazol-5-yl)urea
Authors:Zhu, X, Kulathila, R, Hu, T, Xie, X.
Deposit date:2018-08-17
Release date:2018-10-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Discovery of Orally Active Inhibitors of Brahma Homolog (BRM)/SMARCA2 ATPase Activity for the Treatment of Brahma Related Gene 1 (BRG1)/SMARCA4-Mutant Cancers.
J. Med. Chem., 61, 2018
6P4U
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BU of 6p4u by Molmil
The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with Mg and AMP
Descriptor: ACETATE ION, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ...
Authors:Tan, K, Zhou, M, Jedrzejczak, R, Babnigg, G, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-05-28
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of teixobactin-producing nonribosomal peptide synthetase condensation and adenylation domains.
Curr Res Struct Biol, 2, 2020
6UIA
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Structure of ATP citrate lyase with CoA in a partially open conformation
Descriptor: ATP-citrate synthase, COENZYME A
Authors:Wei, X, Marmorstein, R.
Deposit date:2019-09-30
Release date:2019-12-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Molecular basis for acetyl-CoA production by ATP-citrate lyase.
Nat.Struct.Mol.Biol., 27, 2020
6P3I
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The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with Mg
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, SULFATE ION, ...
Authors:Tan, K, Zhou, M, Jedrzejczak, R, Babnigg, G, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-05-23
Release date:2019-06-05
Last modified:2020-03-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structures of teixobactin-producing nonribosomal peptide synthetase condensation and adenylation domains.
Curr Res Struct Biol, 2, 2020
8TF7
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Apo structure of protein crystal of Tri17
Descriptor: AMP-binding protein
Authors:Zhai, R, Zhang, W.
Deposit date:2023-07-09
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:De novo biosynthesis of azide by a promiscuous N-nitrosylase
To Be Published
3AAM
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BU of 3aam by Molmil
Crystal structure of endonuclease IV from Thermus thermophilus HB8
Descriptor: Endonuclease IV, MANGANESE (II) ION, PHOSPHATE ION
Authors:Asano, R, Ishikawa, H, Nakane, S, Baba, S, Nakagawa, N, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-11-20
Release date:2010-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA
Acta Crystallogr.,Sect.D, 67, 2011
6F0F
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Crystal structure ASF1-ip2_s
Descriptor: Histone chaperone ASF1A, ip2_s
Authors:Gaubert, A, Guichard, B, Murciano, B, Le Du, M.H, Ochsenbein, F, Guerois, R, Andreani, J.
Deposit date:2017-11-20
Release date:2019-06-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design on a Rational Basis of High-Affinity Peptides Inhibiting the Histone Chaperone ASF1.
Cell Chem Biol, 26, 2019
4HWY
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BU of 4hwy by Molmil
Trypanosoma brucei procathepsin B solved from 40 fs free-electron laser pulse data by serial femtosecond X-ray crystallography
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cysteine peptidase C (CPC), beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Redecke, L, Nass, K, DePonte, D.P, White, T.A, Rehders, D, Barty, A, Stellato, F, Liang, M, Barends, T.R.M, Boutet, S, Williams, G.W, Messerschmidt, M, Seibert, M.M, Aquila, A, Arnlund, D, Bajt, S, Barth, T, Bogan, M.J, Caleman, C, Chao, T.-C, Doak, R.B, Fleckenstein, H, Frank, M, Fromme, R, Galli, L, Grotjohann, I, Hunter, M.S, Johansson, L.C, Kassemeyer, S, Katona, G, Kirian, R.A, Koopmann, R, Kupitz, C, Lomb, L, Martin, A.V, Mogk, S, Neutze, R, Shoemann, R.L, Steinbrener, J, Timneanu, N, Wang, D, Weierstall, U, Zatsepin, N.A, Spence, J.C.H, Fromme, P, Schlichting, I, Duszenko, M, Betzel, C, Chapman, H.
Deposit date:2012-11-09
Release date:2012-12-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Natively inhibited Trypanosoma brucei cathepsin B structure determined by using an X-ray laser.
Science, 339, 2013
6F0G
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BU of 6f0g by Molmil
Crystal structure ASF1-ip3
Descriptor: Histone chaperone ASF1A, SULFATE ION, ip3
Authors:Gaubert, A, Guichard, B, Richet, N, Le Du, M.H, Andreani, J, Guerois, R, Ochsenbein, F.
Deposit date:2017-11-20
Release date:2019-06-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design on a Rational Basis of High-Affinity Peptides Inhibiting the Histone Chaperone ASF1.
Cell Chem Biol, 26, 2019
1WKD
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BU of 1wkd by Molmil
TRNA-GUANINE TRANSGLYCOSYLASE
Descriptor: TRNA-GUANINE TRANSGLYCOSYLASE, ZINC ION
Authors:Romier, C, Reuter, K, Suck, D, Ficner, R.
Deposit date:1996-08-06
Release date:1997-07-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Mutagenesis and crystallographic studies of Zymomonas mobilis tRNA-guanine transglycosylase reveal aspartate 102 as the active site nucleophile.
Biochemistry, 35, 1996
1WKE
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BU of 1wke by Molmil
TRNA-GUANINE TRANSGLYCOSYLASE
Descriptor: TRNA-GUANINE TRANSGLYCOSYLASE, ZINC ION
Authors:Romier, C, Reuter, K, Suck, D, Ficner, R.
Deposit date:1996-08-06
Release date:1997-07-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutagenesis and crystallographic studies of Zymomonas mobilis tRNA-guanine transglycosylase reveal aspartate 102 as the active site nucleophile.
Biochemistry, 35, 1996
1WKF
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BU of 1wkf by Molmil
TRNA-GUANINE TRANSGLYCOSYLASE
Descriptor: TRNA-GUANINE TRANSGLYCOSYLASE, ZINC ION
Authors:Romier, C, Reuter, K, Suck, D, Ficner, R.
Deposit date:1996-08-06
Release date:1997-07-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutagenesis and crystallographic studies of Zymomonas mobilis tRNA-guanine transglycosylase reveal aspartate 102 as the active site nucleophile.
Biochemistry, 35, 1996
1UFW
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BU of 1ufw by Molmil
Solution structure of RNP domain in Synaptojanin 2
Descriptor: Synaptojanin 2
Authors:He, F, Muto, Y, Ushikoshi, R, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nakayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-10
Release date:2003-12-10
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of RNP domain in Synaptojanin 2
To be Published
8U72
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BU of 8u72 by Molmil
Cryo-EM structure of the SPARTA oligomer with guide RNA and target DNA
Descriptor: DNA (5'-D(P*TP*AP*TP*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*C)-3'), MAGNESIUM ION, Piwi domain-containing protein, ...
Authors:Malik, R, Kottur, J, Aggarwal, A.K.
Deposit date:2023-09-14
Release date:2024-06-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Nucleic acid mediated activation of a short prokaryotic Argonaute immune system.
Nat Commun, 15, 2024
6POE
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BU of 6poe by Molmil
Structure of ACLY in complex with CoA
Descriptor: ATP-citrate synthase, COENZYME A
Authors:Wei, X, Marmorstein, R.
Deposit date:2019-07-03
Release date:2019-12-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Molecular basis for acetyl-CoA production by ATP-citrate lyase.
Nat.Struct.Mol.Biol., 27, 2020
8V9O
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Imaging scaffold engineered to bind the therapeutic protein target BARD1
Descriptor: CALCIUM ION, Tetrahedral Nanocage Cage Component Fused to Anti-BARD1 Darpin, Tetrahedral Nanocage Cage, ...
Authors:Agdanowski, M.P, Castells-Graells, R, Sawaya, M.R, Yeates, T.O, Arbing, M.A.
Deposit date:2023-12-08
Release date:2024-05-15
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (3.81 Å)
Cite:X-ray crystal structure of a designed rigidified imaging scaffold in the ligand-free conformation.
Acta Crystallogr.,Sect.F, 80, 2024
8U3M
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BU of 8u3m by Molmil
The FARFAR-MD-NMR ensemble of an HIV-1 TAR excited state
Descriptor: The excited state of HIV-1 transactivation response element (31-MER)
Authors:Geng, A, Ganser, L, Roy, R, Shi, H, Pratihar, S, Case, D.A, Al-Hashimi, H.M.
Deposit date:2023-09-07
Release date:2023-10-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An RNA excited conformational state at atomic resolution.
Nat Commun, 14, 2023
1XDZ
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Crystal Structure of Gram_Positive Bacillus subtilis Glucose inhibited Division protein B (gidB), Structural genomics, MCSG
Descriptor: Methyltransferase gidB
Authors:Zhang, R, Wu, R, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-09-08
Release date:2004-10-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The 1.6A crystal ctructure of Gram-positive Bacillus subtilis glucose inhibited division protein B (gidB)
To be Published
4MIV
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BU of 4miv by Molmil
Crystal Structure of Sulfamidase, Crystal Form L
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Sidhu, N.S, Uson, I, Schreiber, K, Proepper, K, Becker, S, Sheldrick, G.M, Gaertner, J, Kraetzner, R, Steinfeld, R.
Deposit date:2013-09-02
Release date:2014-05-14
Last modified:2021-06-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of sulfamidase provides insight into the molecular pathology of mucopolysaccharidosis IIIA.
Acta Crystallogr.,Sect.D, 70, 2014
1XFQ
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structure of the blue shifted intermediate state of the photoactive yellow protein lacking the N-terminal part
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Bernard, C, Houben, K, Derix, N.M, Marks, D, van der Horst, M.A, Hellingwerf, K.J, Boelens, R, Kaptein, R, van Nuland, N.A.
Deposit date:2004-09-15
Release date:2005-08-16
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The solution structure of a transient photoreceptor intermediate: delta25 photoactive yellow protein
STRUCTURE, 13, 2005
1XGV
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Isocitrate Dehydrogenase from the hyperthermophile Aeropyrum pernix
Descriptor: Isocitrate dehydrogenase
Authors:Karlstrom, M, Stokke, R, Steen, I.H, Birkeland, N.-K, Ladenstein, R.
Deposit date:2004-09-17
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Isocitrate dehydrogenase from the hyperthermophile Aeropyrum pernix: X-ray structure analysis of a ternary enzyme-substrate complex and thermal stability
J.Mol.Biol., 345, 2005

223790

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