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PDB: 27201 件

1QTZ
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D20C MUTANT OF T4 LYSOZYME
分子名称: BETA-MERCAPTOETHANOL, PROTEIN (T4 LYSOZYME)
著者Kuroki, R, Weaver, L.H, Matthews, B.W.
登録日1999-06-29
公開日1999-07-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of the conversion of T4 lysozyme into a transglycosidase by reengineering the active site.
Proc.Natl.Acad.Sci.USA, 96, 1999
8BST
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Crystal structure of the kainate receptor GluK3-H523A ligand binding domain in complex with kainate at 2.7A resolution
分子名称: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, ACETATE ION, CHLORIDE ION, ...
著者Venskutonyte, R, Frydenvang, K, Kastrup, J.S.
登録日2022-11-26
公開日2023-12-13
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Small-molecule positive allosteric modulation of homomeric kainate receptors GluK1-3: development of screening assays and insight into GluK3 structure.
Febs J., 291, 2024
4NWC
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Crystal structure of the GluK3 ligand-binding domain (S1S2) in complex with the agonist (2S,4R)-4-(3-Methoxy-3-oxopropyl)glutamic acid at 2.01 A resolution.
分子名称: (2S,4R)-4-(3-Methoxy-3-oxopropyl) glutamic acid, CHLORIDE ION, Glutamate receptor ionotropic, ...
著者Larsen, A.P, Venskutonyte, R, Frydenvang, K, Gajhede, M, Kastrup, J.S.
登録日2013-12-06
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.012 Å)
主引用文献Molecular Recognition of Two 2,4-syn-Functionalized (S)-Glutamate Analogues by the Kainate Receptor GluK3 Ligand Binding Domain.
Chemmedchem, 9, 2014
4E0W
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Crystal structure of the kainate receptor GluK3 ligand binding domain in complex with kainate
分子名称: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, CHLORIDE ION, Glutamate receptor, ...
著者Venskutonyte, R, Frydenvang, K, Kastrup, J.S.
登録日2012-03-05
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3501 Å)
主引用文献Kainate induces various domain closures in AMPA and kainate receptors.
Neurochem Int, 61, 2012
5Z5W
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VFR12 in complex with LPS micelles
分子名称: Peptide from Prothrombin
著者Saravanan, R, Schmidtchen, A.
登録日2018-01-21
公開日2018-03-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for endotoxin neutralisation and anti-inflammatory activity of thrombin-derived C-terminal peptides.
Nat Commun, 9, 2018
3GBD
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Crystal structure of the isomaltulose synthase SmuA from Protaminobacter rubrum
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, Sucrose isomerase SmuA from Protaminobacter rubrum
著者Ravaud, S, Robert, X, Haser, R, Aghajari, N.
登録日2009-02-19
公開日2009-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural determinants of product specificity of sucrose isomerases
Febs Lett., 583, 2009
1L6S
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Crystal Structure of Porphobilinogen Synthase Complexed with the Inhibitor 4,7-Dioxosebacic Acid
分子名称: 4,7-DIOXOSEBACIC ACID, MAGNESIUM ION, PORPHOBILINOGEN SYNTHASE, ...
著者Jaffe, E.K, Kervinen, J, Martins, J, Stauffer, F, Neier, R, Wlodawer, A, Zdanov, A.
登録日2002-03-13
公開日2002-04-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Species-Specific Inhibition of Porphobilinogen Synthase by 4-Oxosebacic Acid
J.Biol.Chem., 277, 2002
8BR6
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Discovery of IRAK4 Inhibitor 40
分子名称: ACETATE ION, Interleukin-1 receptor-associated kinase 4, ~{N}-[6-methoxy-2-(2-methylsulfonylethyl)-1,3-dihydroindazol-5-yl]-6-(2-oxidanylpropan-2-yl)pyridine-2-carboxamide
著者Schafer, M, Bothe, U, Schmidt, N, Gunther, J, Nubbemeyer, R, Siebeneicher, H, Ring, S, Boemer, U, Peters, M, Denner, K, Himmel, H, Sutter, A, Terebesi, I, Lange, M, Wengner, A.M, Guimond, N, Thaler, T, Platzek, J, Ewerspaecher, U, Steuber, H, Steinmeyer, A, Zollner, T.M.
登録日2022-11-22
公開日2024-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.167 Å)
主引用文献Discovery of IRAK4 Inhibitors BAY1834845 (Zabedosertib) and BAY1830839 .
J.Med.Chem., 67, 2024
8BR5
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Discovery of IRAK4 Inhibitor 41
分子名称: Interleukin-1 receptor-associated kinase 4, ~{N}-[2,3-dimethyl-6-(1~{H}-pyrazol-5-yl)benzimidazol-5-yl]-6-(trifluoromethyl)pyridine-2-carboxamide
著者Schafer, M, Bothe, U, Schmidt, N, Gunther, J, Nubbemeyer, R, Siebeneicher, H, Ring, S, Boemer, U, Peters, M, Denner, K, Himmel, H, Sutter, A, Terebesi, I, Lange, M, Wenger, A.M, Guimond, N, Thaler, T, Platzek, J, Eberspaecher, U, Steuber, H, Steinmeyer, A, Zollner, T.M.
登録日2022-11-22
公開日2024-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Discovery of IRAK4 Inhibitors BAY1834845 (Zabedosertib) and BAY1830839 .
J.Med.Chem., 67, 2024
8BR7
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Discovery of IRAK4 Inhibitors BAY1834845 and BAY1830839
分子名称: 3-nitro-~{N}-[2-[2-oxidanylidene-2-[4-(phenylcarbonyl)piperazin-1-yl]ethyl]indazol-5-yl]benzamide, Interleukin-1 receptor-associated kinase 4
著者Schafer, M, Bothe, U, Schmidt, N, Gunther, J, Nubbemeyer, R, Siebeneicher, H, Ring, S, Boemer, U, Peters, M, Denner, K, Himmel, H, Sutter, A, Terebesi, I, Lange, M, Wenger, A.M, Guimond, N, Thaler, T, Platzek, J, Eberspaecher, U, Steuber, H, Steinmeyer, A, Zollner, T.M.
登録日2022-11-22
公開日2024-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.119 Å)
主引用文献Discovery of IRAK4 Inhibitors BAY1834845 (Zabedosertib) and BAY1830839 .
J.Med.Chem., 67, 2024
7ZOW
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Crystal structure of Synechocystis halorhodopsin (SyHR), Cl-pumping mode, O state
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, OLEIC ACID, ...
著者Kovalev, K, Bukhdruker, S, Astashkin, R, Vaganova, S, Gordeliy, V.
登録日2022-04-26
公開日2022-11-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural insights into light-driven anion pumping in cyanobacteria.
Nat Commun, 13, 2022
7ZOY
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Crystal structure of Synechocystis halorhodopsin (SyHR), SO4-bound form, ground state
分子名称: CHLORIDE ION, EICOSANE, GLYCEROL, ...
著者Kovalev, K, Bukhdruker, S, Astashkin, R, Vaganova, S, Gordeliy, V.
登録日2022-04-26
公開日2022-11-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structural insights into light-driven anion pumping in cyanobacteria.
Nat Commun, 13, 2022
5U76
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Chicken Slo2.2 in a closed conformation vitrified in the presence of 300 mM NaCl
分子名称: Potassium channel subfamily T member 1
著者Hite, R.K, MacKinnon, R.
登録日2016-12-11
公開日2017-02-08
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.76 Å)
主引用文献Structural Titration of Slo2.2, a Na(+)-Dependent K(+) Channel.
Cell, 168, 2017
5TQQ
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Cryo-electron microscopy structure of a bovine CLC-K chloride channel, main (class 1) conformation
分子名称: Chloride channel protein, Monoclonal antibody, Fab fragment, ...
著者Park, E, MacKinnon, R.
登録日2016-10-24
公開日2017-01-04
最終更新日2019-11-20
実験手法ELECTRON MICROSCOPY (3.76 Å)
主引用文献Structure of a CLC chloride ion channel by cryo-electron microscopy.
Nature, 541, 2017
1O9V
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F17-aG lectin domain from Escherichia coli in complex with a selenium carbohydrate derivative
分子名称: F17-AG LECTIN DOMAIN, methyl 2-acetamido-2-deoxy-1-seleno-beta-D-glucopyranoside
著者Buts, L, De Genst, E, Loris, R, Oscarson, S, Lahmann, M, Messens, J, Brosens, E, Wyns, L, Bouckaert, J, De Greve, H.
登録日2002-12-20
公開日2003-05-29
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The Fimbrial Adhesin F17-G of Enterotoxigenic Escherichia Coli Has an Immunoglobulin-Like Lectin Domain that Binds N-Acetylglucosamine
Mol.Microbiol., 49, 2003
1K5B
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Crystal Structure of Human Angiogenin Variant des(121-123)
分子名称: Angiogenin, CITRIC ACID
著者Leonidas, D.D, Shapiro, R, Subbarao, G.V, Russo, A, Acharya, K.R.
登録日2001-10-10
公開日2002-03-20
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic studies on the role of the C-terminal segment of human angiogenin in defining enzymatic potency.
Biochemistry, 41, 2002
5UBW
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Structure of catalytic domain of Ssel
分子名称: 1,2-ETHANEDIOL, Deubiquitinase SseL
著者Shrestha, R, Das, C.
登録日2016-12-21
公開日2017-12-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.394 Å)
主引用文献Structure of catalytic domain of Ssel
To Be Published
5UBY
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Fab structure of anti-HIV-1 gp120 mAb 1A8
分子名称: Heavy chain of Fab fragment of anti-HIV1 gp120 mAb 1A8, Light chain of Fab fragment of anti-HIV1 gp120 mAb 1A8
著者Pan, R, Kong, X.-P.
登録日2016-12-21
公開日2018-01-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献High Antibody Diversity and Low Inter-clonal Competition Favor Production of Functional Neutralizing Antibodies
To be Published
5Z7O
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SmChiA sliding-intermediate with chitotetraose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A, GLYCEROL
著者Nakamura, A, Iino, R.
登録日2018-01-30
公開日2018-09-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Processive chitinase is Brownian monorail operated by fast catalysis after peeling rail from crystalline chitin.
Nat Commun, 9, 2018
1K59
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Crystal Structure of Human Angiogenin Variant Q117G
分子名称: CITRIC ACID, angiogenin
著者Leonidas, D.D, Shapiro, R, Subbarao, G.V, Russo, A, Acharya, K.R.
登録日2001-10-10
公開日2002-03-20
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic studies on the role of the C-terminal segment of human angiogenin in defining enzymatic potency.
Biochemistry, 41, 2002
3GG8
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Crystal structure of the Toxoplasma gondii Pyruvate Kinase N terminal truncated
分子名称: GLYCEROL, Pyruvate kinase, SULFATE ION
著者Wernimont, A.K, Lew, J, Allali-Hassani, A, Vedadi, M, Bochkarev, A, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Hills, T, Schapira, M, Hui, R, Pizarro, J.C, Structural Genomics Consortium (SGC)
登録日2009-02-27
公開日2009-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献The crystal structure of Toxoplasma gondii pyruvate kinase 1.
Plos One, 5, 2010
5YXW
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Crystal structure of the prefusion form of measles virus fusion protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, glycoprotein F1,measles virus fusion protein, ...
著者Hashiguchi, T, Fukuda, Y, Matsuoka, R, Kuroda, D, Kubota, M, Shirogane, Y, Watanabe, S, Tsumoto, K, Kohda, D, Plemper, R.K, Yanagi, Y.
登録日2017-12-07
公開日2018-02-21
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (2.776 Å)
主引用文献Structures of the prefusion form of measles virus fusion protein in complex with inhibitors.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7ZVJ
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Homodimeric structure of LARGE1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, MANGANESE (II) ION, PHOSPHATE ION, ...
著者Diskin, R, Katz, M.
登録日2022-05-16
公開日2022-11-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structural basis for matriglycan synthesis by the LARGE1 dual glycosyltransferase.
Plos One, 17, 2022
7ZXW
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Catalytic domain of UDP-Glucose Glycoprotein Glucosyltransferase from Chaetomium thermophilum in complex with the 5-[(morpholin-4-yl)methyl]quinolin-8-ol inhibitor
分子名称: 5-(morpholin-4-ylmethyl)quinolin-8-ol, CALCIUM ION, DIMETHYL SULFOXIDE, ...
著者Le Cornu, J.D, Ibba, R, Roversi, P, Zitzmann, N.
登録日2022-05-23
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.246 Å)
主引用文献Crystal polymorphism in fragment-based lead discovery of ligands of the catalytic domain of UGGT, the glycoprotein folding quality control checkpoint.
Front Mol Biosci, 9, 2022
7ZKO
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X-ray structure of the complex between human alpha thrombin and a pseudo-cyclic thrombin binding aptamer (TBA-NNp/DDp) - Crystal form delta
分子名称: 3-[13-methyl-5,7,12,14-tetrakis(oxidanylidene)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1(15),2,4(16),8,10-pentaen-6-yl]propyl 3-[5,7,12,14-tetrakis(oxidanylidene)-13-(3-oxidanylpropyl)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1,3,8(16),9,11(15)-pentaen-6-yl]propyl hydrogen phosphate, 3-[5-[3-bis(oxidanyl)phosphanyloxypropoxy]naphthalen-1-yl]oxypropyl 3-(5-oxidanylnaphthalen-1-yl)oxypropyl hydrogen phosphate, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, ...
著者Troisi, R, Sica, F.
登録日2022-04-13
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A terminal functionalization strategy reveals unusual binding abilities of anti-thrombin anticoagulant aptamers.
Mol Ther Nucleic Acids, 30, 2022

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件を2024-07-17に公開中

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