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PDB: 27201 件

5XPW
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Structure of amphioxus IgVJ-C2 molecule
分子名称: amphioxus IgVJ-C2
著者Chen, R, Qi, J, Zhang, N, Zhang, L, Yao, S, Wu, Y, Jiang, B, Wang, Z, Yuan, H, Zhang, Q, Xia, C.
登録日2017-06-05
公開日2018-04-18
最終更新日2018-04-25
実験手法X-RAY DIFFRACTION (2.003 Å)
主引用文献Discovery and Analysis of Invertebrate IgVJ-C2 Structure from Amphioxus Provides Insight into the Evolution of the Ig Superfamily.
J. Immunol., 200, 2018
1ONA
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CO-CRYSTALS OF CONCANAVALIN A WITH METHYL-3,6-DI-O-(ALPHA-D-MANNOPYRANOSYL)-ALPHA-D-MANNOPYRANOSIDE
分子名称: CALCIUM ION, CONCANAVALIN A, MANGANESE (II) ION, ...
著者Bouckaert, J, Maes, D, Poortmans, F, Wyns, L, Loris, R.
登録日1996-07-07
公開日1997-09-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A structure of the complex between concanavalin A and methyl-3,6-di-O-(alpha-D-mannopyranosyl)-alpha-D-mannopyranoside reveals two binding modes.
J.Biol.Chem., 271, 1996
5XQV
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Crystal structure of Notched-fin eelpout type III antifreeze protein A20L mutant (NFE6, AFP), P21 form
分子名称: Ice-structuring protein
著者Adachi, M, Shimizu, R, Shibazaki, C, Kondo, H, Tsuda, S.
登録日2017-06-07
公開日2018-05-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Polypentagonal ice-like water networks emerge solely in an activity-improved variant of ice-binding protein
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8A0C
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Capsular polysaccharide synthesis multienzyme in complex with CMP
分子名称: Bcs3, CYTIDINE-5'-MONOPHOSPHATE, GLYCEROL, ...
著者Cifuente, J.O, Schulze, J, Bethe, A, Di Domenico, V, Litschko, C, Budde, I, Eidenberger, L, Thiesler, H, Ramon-Roth, I, Berger, M, Claus, H, DAngelo, C, Marina, A, Gerardy-Schahn, R, Schubert, M, Guerin, M.E, Fiebig, T.
登録日2022-05-27
公開日2023-04-26
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A multi-enzyme machine polymerizes the Haemophilus influenzae type b capsule.
Nat.Chem.Biol., 19, 2023
5XR0
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Crystal structure of Notched-fin eelpout type III antifreeze protein A20T mutant (NFE6, AFP), P21 form
分子名称: Ice-structuring protein
著者Adachi, M, Shimizu, R, Shibazaki, C, Kondo, H, Tsuda, S.
登録日2017-06-07
公開日2018-05-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Polypentagonal ice-like water networks emerge solely in an activity-improved variant of ice-binding protein
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8A0M
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Capsular polysaccharide synthesis multienzyme in complex with capsular polymer fragment
分子名称: Bcs3, MAGNESIUM ION, beta-D-ribosyl-(1->1)-D-ribitol-5-phosphate
著者Cifuente, J.O, Schulze, J, Bethe, A, Di Domenico, V, Litschko, C, Budde, I, Eidenberger, L, Thiesler, H, Ramon-Roth, I, Berger, M, Claus, H, DAngelo, C, Marina, A, Gerardy-Schahn, R, Schubert, M, Guerin, M.E, Fiebig, T.
登録日2022-05-29
公開日2023-04-26
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献A multi-enzyme machine polymerizes the Haemophilus influenzae type b capsule.
Nat.Chem.Biol., 19, 2023
8A0X
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Crystal structure of the HigB2-HigA2 tetramer in complex with operator DNA
分子名称: Antitoxin HigA-2, DNA (30-MER), DNA (31-MER), ...
著者Hadzi, S, Loris, R.
登録日2022-05-30
公開日2023-05-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.296 Å)
主引用文献Fuzzy DNA recognition by a prokaryotic transcription factor
To Be Published
5XUU
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Crystal structure of Lachnospiraceae bacterium ND2006 Cpf1 in complex with crRNA and target DNA (TCCA PAM)
分子名称: 1,2-ETHANEDIOL, DNA (29-MER), DNA (5'-D(*CP*GP*TP*CP*CP*TP*CP*CP*A)-3'), ...
著者Yamano, T, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2017-06-26
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for the Canonical and Non-canonical PAM Recognition by CRISPR-Cpf1.
Mol. Cell, 67, 2017
8A0W
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Crystal structure of the HigA2 antitoxin in complex with operator DNA
分子名称: Antitoxin HigA-2, DNA (17-MER), PHOSPHATE ION
著者Hadzi, S, Loris, R.
登録日2022-05-30
公開日2023-05-03
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.334 Å)
主引用文献Fuzzy recognition by the prokaryotic transcription factor HigA2 from Vibrio cholerae.
Nat Commun, 15, 2024
7ZQU
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A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - C72A mutant
分子名称: FLAVIN MONONUCLEOTIDE, Putative blue-light photoreceptor
著者Batra-Safferling, R, Granzin, J.
登録日2022-05-03
公開日2023-05-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - C72A mutant
To Be Published
1ILU
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X-RAY CRYSTAL STRUCTURE THE TWO SITE-SPECIFIC MUTANTS ILE7SER AND PHE110SER OF AZURIN FROM PSEUDOMONAS AERUGINOSA
分子名称: AZURIN, COPPER (II) ION
著者Hammann, C, Nar, H, Huber, R, Messerschmidt, A.
登録日1995-10-12
公開日1996-03-08
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献X-ray crystal structure of the two site-specific mutants Ile7Ser and Phe110Ser of azurin from Pseudomonas aeruginosa.
J.Mol.Biol., 255, 1996
7SGZ
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Structure of the yeast Rad24-RFC loader bound to DNA and the closed 9-1-1 clamp
分子名称: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, Crick strand, ...
著者Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
登録日2021-10-07
公開日2022-03-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献DNA is loaded through the 9-1-1 DNA checkpoint clamp in the opposite direction of the PCNA clamp.
Nat.Struct.Mol.Biol., 29, 2022
7SH2
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Structure of the yeast Rad24-RFC loader bound to DNA and the open 9-1-1 clamp
分子名称: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, Crick strand, ...
著者Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
登録日2021-10-07
公開日2022-03-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献DNA is loaded through the 9-1-1 DNA checkpoint clamp in the opposite direction of the PCNA clamp.
Nat.Struct.Mol.Biol., 29, 2022
7ZUG
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Heterogeneous nuclear ribonucleoprotein H1, qRRM2 domain
分子名称: CHLORIDE ION, Heterogeneous nuclear ribonucleoprotein H, N-terminally processed, ...
著者Winter, N, Kumar, M, Isupov, M.N, Wiener, R.
登録日2022-05-12
公開日2023-05-24
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.075 Å)
主引用文献Heterogeneous nuclear ribonucleoprotein H1, qRRM2 domain
To Be Published
5XXL
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Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron
分子名称: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, Periplasmic beta-glucosidase, ...
著者Nakajima, M, Ishiguro, R, Tanaka, N, Abe, K, Maeda, T, Miyanaga, A, Takahash, Y, Sugimoto, N, Nakai, H, Taguchi, H.
登録日2017-07-04
公開日2017-12-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Function and structure relationships of a beta-1,2-glucooligosaccharide-degrading beta-glucosidase.
FEBS Lett., 591, 2017
5XXO
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Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose
分子名称: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, Periplasmic beta-glucosidase, ...
著者Nakajima, M, Ishiguro, R, Tanaka, N, Abe, K, Maeda, T, Miyanaga, A, Takahash, Y, Sugimoto, N, Nakai, H, Taguchi, H.
登録日2017-07-04
公開日2017-12-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Function and structure relationships of a beta-1,2-glucooligosaccharide-degrading beta-glucosidase.
FEBS Lett., 591, 2017
1IT7
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Crystal structure of archaeosine tRNA-guanine transglycosylase complexed with guanine
分子名称: Archaeosine tRNA-guanine transglycosylase, GUANINE, MAGNESIUM ION, ...
著者Ishitani, R, Nureki, O, Fukai, S, Kijimoto, T, Nameki, N, Watanabe, M, Kondo, H, Sekine, M, Okada, N, Nishimura, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-01-11
公開日2002-05-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of archaeosine tRNA-guanine transglycosylase.
J.Mol.Biol., 318, 2002
1P3T
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Crystal Structures of the NO-and CO-Bound Heme Oxygenase From Neisseria Meningitidis: Implications for Oxygen Activation
分子名称: Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
著者Friedman, J, Lad, L, Deshmukh, R, Li, H, Wilks, A, Poulos, T.L.
登録日2003-04-18
公開日2003-12-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of the NO- and CO-bound heme oxygenase from Neisseriae meningitidis. Implications for O2 activation
J.Biol.Chem., 278, 2003
1P3V
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Crystal Structures of the NO-and CO-Bound Heme Oxygenase From Neisseria Meningitidis: Implications for Oxygen Activation
分子名称: CARBON MONOXIDE, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
著者Friedman, J, Lad, L, Deshmukh, R, Li, H, Wilks, A, Poulos, T.L.
登録日2003-04-18
公開日2003-12-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structures of the NO- and CO-bound heme oxygenase from Neisseriae meningitidis. Implications for O2 activation
J.Biol.Chem., 278, 2003
5XXN
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Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose
分子名称: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, Periplasmic beta-glucosidase, ...
著者Nakajima, M, Ishiguro, R, Tanaka, N, Abe, K, Maeda, T, Miyanaga, A, Takahashi, Y, Sugimono, N, Nakai, H, Taguchi, H.
登録日2017-07-04
公開日2017-12-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Function and structure relationships of a beta-1,2-glucooligosaccharide-degrading beta-glucosidase.
FEBS Lett., 591, 2017
1OYJ
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Crystal structure solution of Rice GST1 (OsGSTU1) in complex with glutathione.
分子名称: CHLORIDE ION, GLUTATHIONE, GLYCEROL, ...
著者Dixon, D.P, McEwen, A.G, Lapthorn, A.J, Edwards, R.
登録日2003-04-04
公開日2003-07-01
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Forced evolution of a herbicide detoxifying glutathione transferase.
J.Biol.Chem., 278, 2003
1ILS
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BU of 1ils by Molmil
X-RAY CRYSTAL STRUCTURE THE TWO SITE-SPECIFIC MUTANTS ILE7SER AND PHE110SER OF AZURIN FROM PSEUDOMONAS AERUGINOSA
分子名称: AZURIN, COPPER (II) ION, NITRATE ION
著者Hammann, C, Nar, H, Huber, R, Messerschmidt, A.
登録日1995-10-12
公開日1996-03-08
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray crystal structure of the two site-specific mutants Ile7Ser and Phe110Ser of azurin from Pseudomonas aeruginosa.
J.Mol.Biol., 255, 1996
4LI5
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EGFR-K IN COMPLEX WITH N-[3-[[5-chloro-4-(1H-indol-3-yl)pyrimidin-2-yl]amino]-4-methoxy-phenyl] Prop-2-enamide
分子名称: Epidermal growth factor receptor, N-(3-{[5-chloro-4-(1H-indol-3-yl)pyrimidin-2-yl]amino}-4-methoxyphenyl)propanamide, SODIUM ION
著者Debreczeni, J.E, Seiffert, G.B, Kiefersauer, R, Augustin, M, Nagel, S, Ward, R, Anderton, M, Ashton, S, Bethel, P, Box, M, Butterworth, S, Colclough, N, Chroley, C, Chuaqui, C, Cross, D, Eberlein, C, Finlay, R, Hill, G, Grist, M, Klinowska, T, Lane, C, Martin, S, Orme, J, Smith, P, Wang, F, Waring, M.
登録日2013-07-02
公開日2013-08-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structure- and Reactivity-Based Development of Covalent Inhibitors of the Activating and Gatekeeper Mutant Forms of the Epidermal Growth Factor Receptor (EGFR).
J.Med.Chem., 56, 2013
5Y8O
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Mycobacterium tuberculosis 3-Hydroxyisobutyrate dehydrogenase (MtHIBADH) + NAD + 3-Hydroxy propionate (3-HP)
分子名称: (2~{S})-2-methylpentanedioic acid, 3-HYDROXY-PROPANOIC ACID, ACRYLIC ACID, ...
著者Srikalaivani, R, Singh, A, Surolia, A, Vijayan, M.
登録日2017-08-21
公開日2018-07-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure, interactions and action ofMycobacterium tuberculosis3-hydroxyisobutyric acid dehydrogenase.
Biochem. J., 475, 2018
5XZF
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Vitamin D receptor with a synthetic ligand ADRO1
分子名称: (1R,3S,5Z)-5-[(2E)-2-[(1R,3aS,7aR)-1-[(2R,6S)-6-(1-adamantyl)-6-oxidanyl-hex-4-yn-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol, FORMIC ACID, Mediator of RNA polymerase II transcription subunit 1, ...
著者Otero, R, Numoto, N, Ikura, T, Yamada, S, Mourino, A, Makishima, M, Ito, N.
登録日2017-07-12
公開日2018-07-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献25 S-Adamantyl-23-yne-26,27-dinor-1 alpha ,25-dihydroxyvitamin D3: Synthesis, Tissue Selective Biological Activities, and X-ray Crystal Structural Analysis of Its Vitamin D Receptor Complex.
J. Med. Chem., 61, 2018

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