Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27265 件

4ZO6
DownloadVisualize
BU of 4zo6 by Molmil
Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with cellobiose
分子名称: GLYCEROL, Lin1840 protein, MAGNESIUM ION, ...
著者Nakajima, M, Yoshida, R, Miyanaga, A, Abe, K, Takahashi, Y, Sugimoto, N, Toyoizumi, H, Nakai, H, Kitaoka, M, Taguchi, H.
登録日2015-05-06
公開日2016-05-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Functional and Structural Analysis of a beta-Glucosidase Involved in beta-1,2-Glucan Metabolism in Listeria innocua
Plos One, 11, 2016
5KTE
DownloadVisualize
BU of 5kte by Molmil
Crystal structure of Deinococcus radiodurans MntH, an Nramp-family transition metal transporter
分子名称: Divalent metal cation transporter MntH, Fab Heavy Chain, Fab Light Chain, ...
著者Bane, L.B, Gaudet, R, Weihofen, W.A, Singharoy, A.
登録日2016-07-11
公開日2016-11-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.941 Å)
主引用文献Crystal Structure and Conformational Change Mechanism of a Bacterial Nramp-Family Divalent Metal Transporter.
Structure, 24, 2016
4ZO7
DownloadVisualize
BU of 4zo7 by Molmil
Crystal structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with gentiobiose
分子名称: GLYCEROL, Lin1840 protein, MAGNESIUM ION, ...
著者Nakajima, M, Yoshida, R, Miyanaga, A, Abe, K, Takahashi, Y, Sugimoto, N, Toyoizumi, H, Nakai, H, Kitaoka, M, Taguchi, H.
登録日2015-05-06
公開日2016-05-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Functional and Structural Analysis of a beta-Glucosidase Involved in beta-1,2-Glucan Metabolism in Listeria innocua
Plos One, 11, 2016
5L59
DownloadVisualize
BU of 5l59 by Molmil
Plexin A1 full extracellular region, domains 1 to 10, to 6 angstrom, spacegroup P2(1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A1, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y.
登録日2016-05-28
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (6 Å)
主引用文献Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
1LHI
DownloadVisualize
BU of 1lhi by Molmil
ROLE OF PROLINE RESIDUES IN HUMAN LYSOZYME STABILITY: A SCANNING CALORIMETRIC STUDY COMBINED WITH X-RAY STRUCTURE ANALYSIS OF PROLINE MUTANTS
分子名称: HUMAN LYSOZYME
著者Inaka, K, Matsushima, M, Herning, T, Kuroki, R, Yutani, K, Kikuchi, M.
登録日1992-03-27
公開日1994-01-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Role of proline residues in human lysozyme stability: a scanning calorimetric study combined with X-ray structure analysis of proline mutants.
Biochemistry, 31, 1992
5L5K
DownloadVisualize
BU of 5l5k by Molmil
Plexin A4 full extracellular region, domains 1 to 10, data to 7.5 angstrom, spacegroup P4(1)
分子名称: Plexin-A4
著者Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y.
登録日2016-05-28
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (7.501 Å)
主引用文献Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
5L5L
DownloadVisualize
BU of 5l5l by Molmil
Plexin A4 full extracellular region, domains 1 to 8 modeled, data to 8 angstrom, spacegroup P2(1)
分子名称: Plexin-A4
著者Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y.
登録日2016-05-28
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (8.001 Å)
主引用文献Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
5L95
DownloadVisualize
BU of 5l95 by Molmil
Crystal structure of human UBA5 in complex with UFM1 and AMP
分子名称: ADENOSINE MONOPHOSPHATE, Ubiquitin-fold modifier 1, Ubiquitin-like modifier-activating enzyme 5, ...
著者Oweis, W, Padala, P, Wiener, R.
登録日2016-06-09
公開日2016-09-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Trans-Binding Mechanism of Ubiquitin-like Protein Activation Revealed by a UBA5-UFM1 Complex.
Cell Rep, 16, 2016
3H2S
DownloadVisualize
BU of 3h2s by Molmil
Crystal Structure of the Q03B84 Protein from Lactobacillus casei. Northeast Structural Genomics Consortium Target LcR19.
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative NADH-flavin reductase
著者Vorobiev, S, Lew, S, Seetharaman, J, Wang, D, Ciccosanti, C, Sahdev, S, Acton, T.B, Xiao, R, Everett, J, Nair, R, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2009-04-14
公開日2009-04-28
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of the Q03B84 protein from Lactobacillus casei.
To be Published
5LAU
DownloadVisualize
BU of 5lau by Molmil
Oceanobacillus iheyensis macrodomain mutant G37V with ADPR
分子名称: GLYCEROL, MacroD-type macrodomain, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Gil-Ortiz, F, Zapata-Perez, R, Martinez, A.B, Juanhuix, J, Sanchez-Ferrer, A.
登録日2016-06-15
公開日2017-05-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural and functional analysis of Oceanobacillus iheyensis macrodomain reveals a network of waters involved in substrate binding and catalysis.
Open Biol, 7, 2017
5LBA
DownloadVisualize
BU of 5lba by Molmil
Crystal structure of human RECQL5 helicase in complex with DSPL fragment(1-cyclohexyl-3-(oxolan-2-ylmethyl)urea, SGC - Diamond XChem I04-1 fragment screening.
分子名称: 1-cyclohexyl-3-[[(2~{R})-oxolan-2-yl]methyl]urea, ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase Q5, ...
著者Newman, J.A, Aitkenhead, H, Talon, R, Savitsky, P, Krojer, T, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O, Structural Genomics Consortium (SGC)
登録日2016-06-15
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of human RECQL5 helicase in complex with 3D fragment (1-cyclohexyl-3-(oxolan-2-ylmethyl)urea)
To be published
1IR6
DownloadVisualize
BU of 1ir6 by Molmil
Crystal structure of exonuclease RecJ bound to manganese
分子名称: MANGANESE (II) ION, exonuclease RecJ
著者Yamagata, A, Kakuta, Y, Masui, R, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-09-11
公開日2002-05-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of exonuclease RecJ bound to Mn2+ ion suggests how its characteristic motifs are involved in exonuclease activity.
Proc.Natl.Acad.Sci.USA, 99, 2002
1IT8
DownloadVisualize
BU of 1it8 by Molmil
Crystal structure of archaeosine tRNA-guanine transglycosylase from Pyrococcus horikoshii complexed with archaeosine precursor, preQ0
分子名称: 2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBONITRILE, MAGNESIUM ION, ZINC ION, ...
著者Ishitani, R, Nureki, O, Fukai, S, Kijimoto, T, Nameki, N, Watanabe, M, Kondo, H, Sekine, M, Okada, N, Nishimura, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-01-11
公開日2002-05-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of archaeosine tRNA-guanine transglycosylase.
J.Mol.Biol., 318, 2002
2KJQ
DownloadVisualize
BU of 2kjq by Molmil
Solution Structure Of Protein NMB1076 From Neisseria meningitidis. Northeast Structural Genomics Consortium Target MR101B.
分子名称: DnaA-related protein
著者Wu, Y, Maglaqui, M, Eletsky, A, Ciccosanti, C, Sathyamoorthy, B, Jiang, M, Garcia, E, Nair, R, Rost, B, Swapna, G, Acton, T, Xiao, R, Everett, J, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2009-06-08
公開日2010-04-28
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution Structure Of Protein NMB1076 From Neisseria meningitidis. Northeast Structural Genomics Consortium Target MR101B.
To be Published
3KJZ
DownloadVisualize
BU of 3kjz by Molmil
Crystal structure of native peptidyl-tRNA hydrolase from Mycobacterium smegmatis
分子名称: Peptidyl-tRNA hydrolase
著者Kumar, A, Singh, N, Yadav, R, Prem Kumar, R, Sharma, S, Arora, A, Singh, T.P.
登録日2009-11-04
公開日2010-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of peptidyl-tRNA hydrolase from mycobacterium smegmatis reveals novel features related to enzyme dynamics.
Int J Biochem Mol Biol, 3, 2012
5L74
DownloadVisualize
BU of 5l74 by Molmil
Plexin A2 extracellular segment domains 4-5 (PSI2-IPT2), resolution 1.36 Angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Plexin-A2, ...
著者Kong, Y, Janssen, B.J.C, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y.
登録日2016-06-01
公開日2017-03-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
2KT9
DownloadVisualize
BU of 2kt9 by Molmil
Solution NMR Structure of Probable 30S Ribosomal Protein PSRP-3 (Ycf65-like protein) from Synechocystis sp. (strain PCC 6803), Northeast Structural Genomics Consortium Target Target SgR46
分子名称: Probable 30S ribosomal protein PSRP-3
著者Liu, G, Janjua, J, Xiao, R, Mao, B, Buchwald, W.A, Ciccosanti, C, Belote, R.L, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2010-01-22
公開日2010-02-16
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution NMR Structure of Probable 30S ribosomal protein PSRP-3 (Ycf65-like protein) from Synechocystis sp. (PCC 6803), Northeast Structural Genomics Consortium Target Target SgR46
To be Published
1IEW
DownloadVisualize
BU of 1iew by Molmil
Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme Exo1 in complex with 2-deoxy-2-fluoro-alpha-D-glucoside
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-deoxy-2-fluoro-alpha-D-glucopyranose, ...
著者Hrmova, M, DeGori, R, Fincher, G.B, Smith, B.J, Varghese, J.N.
登録日2001-04-11
公開日2001-11-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Catalytic mechanisms and reaction intermediates along the hydrolytic pathway of a plant beta-D-glucan glucohydrolase.
Structure, 9, 2001
2KO1
DownloadVisualize
BU of 2ko1 by Molmil
Solution NMR structure of the ACT domain from GTP pyrophosphokinase of Chlorobium tepidum. Northeast Structural Genomics Consortium Target CtR148A
分子名称: GTP pyrophosphokinase
著者Eletsky, A, Garcia, E, Wang, H, Ciccosanti, C, Jiang, M, Nair, R, Rost, B, Acton, T.B, Xiao, R, Everett, J.K, Lee, H, Prestegard, J.H, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2009-09-08
公開日2009-09-29
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution NMR structure of the ACT domain from GTP pyrophosphokinase of Chlorobium tepidum
To be Published
5L7N
DownloadVisualize
BU of 5l7n by Molmil
Plexin A1 extracellular fragment, domains 7-10 (IPT3-IPT6)
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Kong, Y, Janssen, B.J.C, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y.
登録日2016-06-03
公開日2017-03-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
2KW9
DownloadVisualize
BU of 2kw9 by Molmil
Solution NMR Structure of SAP domain of MKL/myocardin-like protein 1 from H.sapiens, Northeast Structural Genomics Consortium Target HR4547E
分子名称: MKL/myocardin-like protein 1
著者Liu, G, Shastry, R, Ciccosanti, C, Janjua, H, Acton, T.B, Xiao, R, Mao, B, Everett, J.K, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2010-03-31
公開日2010-06-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Northeast Structural Genomics Consortium Target HR4547E
To be Published
3GUW
DownloadVisualize
BU of 3guw by Molmil
Crystal Structure of the TatD-like Protein (AF1765) from Archaeoglobus fulgidus, Northeast Structural Genomics Consortium Target GR121
分子名称: ZINC ION, uncharacterized protein AF_1765
著者Forouhar, F, Su, M, Seetharaman, J, Fang, F, Xiao, R, Cunningham, K, Ma, L, Zhao, L, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2009-03-30
公開日2009-04-07
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Northeast Structural Genomics Consortium Target GR121
To be Published
5L56
DownloadVisualize
BU of 5l56 by Molmil
Plexin A1 full extracellular region, domains 1 to 10, to 4 angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A1, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y.
登録日2016-05-28
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
2KUC
DownloadVisualize
BU of 2kuc by Molmil
Solution Structure of a putative disulphide-isomerase from Bacteroides thetaiotaomicron
分子名称: Putative disulphide-isomerase
著者Harris, R, Foti, R, Seidel, R.D, Bonanno, J.B, Freeman, J, Bain, K.T, Sauder, J.M, Burley, S.K, Girvin, M.E, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2010-02-17
公開日2010-03-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structure of a putative disulphide-isomerase from Bacteroides thetaiotaomicron
To be Published
2KVO
DownloadVisualize
BU of 2kvo by Molmil
Solution NMR structure of Photosystem II reaction center Psb28 protein from Synechocystis sp.(strain PCC 6803), Northeast Structural Genomics Consortium Target SgR171
分子名称: Photosystem II reaction center psb28 protein
著者Yang, Y, Ramelot, T.A, Cort, J.R, Wang, D, Ciccosanti, C, Hamilton, K, Nair, R, Rost, B, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
登録日2010-03-22
公開日2010-04-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution NMR structure of photosystem II reaction center protein Psb28 from Synechocystis sp. Strain PCC 6803.
Proteins, 79, 2011

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon