Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27479 件

1HB7
DownloadVisualize
BU of 1hb7 by Molmil
quasi-atomic resolution model of bacteriophage PRD1 sus1 mutant, obtained by combined cryo-EM and X-ray crystallography.
分子名称: BACTERIOPHAGE PRD1 SUS1 MUTANT CAPSID
著者San Martin, C, Burnett, R.M, De Haas, F, Heinkel, R, Rutten, T, Fuller, S.D, Butcher, S.J, Bamford, D.H.
登録日2001-04-12
公開日2001-12-05
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献Combined Em/X-Ray Imaging Yields a Quasi-Atomic Model of the Adenovirus-Related Bacteriophage Prd1 and Shows Key Capsid and Membrane Interactions.
Structure, 9, 2001
5IVW
DownloadVisualize
BU of 5ivw by Molmil
Human core TFIIH bound to DNA within the PIC
分子名称: General transcription factor IIH subunit 2, General transcription factor IIH subunit 3, General transcription factor IIH subunit 4, ...
著者He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
登録日2016-03-21
公開日2016-05-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016
5IXI
DownloadVisualize
BU of 5ixi by Molmil
Structure of human JAK1 FERM/SH2 in complex with IFNLR1/IL10RA chimera
分子名称: Chimera protein of Interferon lambda receptor 1 and Interleukin-10 receptor subunit alpha, Tyrosine-protein kinase JAK1
著者Ferrao, R, Wallweber, H.J.A, Lupardus, P.J.
登録日2016-03-23
公開日2016-05-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献The Structural Basis for Class II Cytokine Receptor Recognition by JAK1.
Structure, 24, 2016
3RG3
DownloadVisualize
BU of 3rg3 by Molmil
Crystal structure of the W5E mutant of human carbonic anhydrase II
分子名称: Carbonic anhydrase 2, ZINC ION
著者Domsic, J.F, Robbins, A.H, McKenna, R.
登録日2011-04-07
公開日2012-02-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Structure and catalysis by carbonic anhydrase II: role of active-site tryptophan 5.
Arch.Biochem.Biophys., 516, 2011
5J8C
DownloadVisualize
BU of 5j8c by Molmil
Human MOF C316S, E350Q crystal structure
分子名称: CHLORIDE ION, Histone acetyltransferase KAT8, SODIUM ION, ...
著者McCullough, C.E, Marmorstein, R.
登録日2016-04-07
公開日2016-07-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structural and Functional Role of Acetyltransferase hMOF K274 Autoacetylation.
J.Biol.Chem., 291, 2016
5J8F
DownloadVisualize
BU of 5j8f by Molmil
Human MOF K274P crystal structure
分子名称: CHLORIDE ION, Histone acetyltransferase KAT8, ZINC ION
著者McCullough, C.E, Marmorstein, R.
登録日2016-04-07
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and Functional Role of Acetyltransferase hMOF K274 Autoacetylation.
J.Biol.Chem., 291, 2016
5J8N
DownloadVisualize
BU of 5j8n by Molmil
Exonuclease III homologue Mm3148 from Methanosarcina mazei
分子名称: Exodeoxyribonuclease III, MAGNESIUM ION, TETRAETHYLENE GLYCOL
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2016-04-08
公開日2016-04-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Structure of the archael ExoIII homologue Mm3148 at 1.4 Angstrom
To Be Published
5IY7
DownloadVisualize
BU of 5iy7 by Molmil
Human holo-PIC in the open state
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ...
著者He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
登録日2016-03-24
公開日2016-05-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (8.6 Å)
主引用文献Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016
5J6H
DownloadVisualize
BU of 5j6h by Molmil
Recognition of the MHC class Ib molecule H2-Q10 by the natural killer cell receptor Ly49C
分子名称: Beta-2-microglobulin, H-2 class I histocompatibility antigen, Q10 alpha chain, ...
著者Berry, R, Rossjohn, J.
登録日2016-04-05
公開日2016-07-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Recognition of the Major Histocompatibility Complex (MHC) Class Ib Molecule H2-Q10 by the Natural Killer Cell Receptor Ly49C.
J.Biol.Chem., 291, 2016
3KJZ
DownloadVisualize
BU of 3kjz by Molmil
Crystal structure of native peptidyl-tRNA hydrolase from Mycobacterium smegmatis
分子名称: Peptidyl-tRNA hydrolase
著者Kumar, A, Singh, N, Yadav, R, Prem Kumar, R, Sharma, S, Arora, A, Singh, T.P.
登録日2009-11-04
公開日2010-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of peptidyl-tRNA hydrolase from mycobacterium smegmatis reveals novel features related to enzyme dynamics.
Int J Biochem Mol Biol, 3, 2012
5JK4
DownloadVisualize
BU of 5jk4 by Molmil
Phosphate-Binding Protein from Stenotrophomonas maltophilia.
分子名称: Alkaline phosphatase, PHOSPHATE ION
著者Keegan, R, Waterman, D, Hopper, D, Coates, L, Guo, J, Coker, A.R, Erskine, P.T, Wood, S.P, Cooper, J.B.
登録日2016-04-25
公開日2016-05-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献The 1.1 angstrom resolution structure of a periplasmic phosphate-binding protein from Stenotrophomonas maltophilia: a crystallization contaminant identified by molecular replacement using the entire Protein Data Bank.
Acta Crystallogr D Struct Biol, 72, 2016
5JMA
DownloadVisualize
BU of 5jma by Molmil
Crystal structure of Mycobacterium avium SerB2 in complex with serine at catalytic (PSP) domain
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, Phosphoserine phosphatase, ...
著者Shree, S, Dubey, S, Agrawal, A, Ramachandran, R.
登録日2016-04-28
公開日2017-05-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystal structure of Mycobacterium avium SerB2 in complex with serine at catalytic (PSP) domain
To be published
5J2R
DownloadVisualize
BU of 5j2r by Molmil
Solution structure of Ras Binding Domain (RBD) of B-Raf
分子名称: N-[2-methoxy-5-({[(E)-2-(2,4,6-trimethoxyphenyl)ethenyl]sulfonyl}methyl)phenyl]glycine, Serine/threonine-protein kinase B-raf
著者Dutta, K, Vasquez-Del Carpio, R, Aggarwal, A.K, Reddy, E.P.
登録日2016-03-29
公開日2016-05-04
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A Small Molecule RAS-Mimetic Disrupts RAS Association with Effector Proteins to Block Signaling.
Cell, 165, 2016
5J5C
DownloadVisualize
BU of 5j5c by Molmil
Crystal structure of ARL1-GTP and DCB domain of BIG1 complex
分子名称: ADP-ribosylation factor-like protein 1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Wang, R, Wang, Z, Zhang, T, Ding, J.
登録日2016-04-02
公開日2016-09-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural basis for targeting BIG1 to Golgi apparatus through interaction of its DCB domain with Arl1
J Mol Cell Biol, 2016
5JH7
DownloadVisualize
BU of 5jh7 by Molmil
Tubulin-Eribulin complex
分子名称: (1S,3S,6S,9S,12S,14R,16R,18S,20R,21R,22S,26R,29S,31R,32S,33R,35R,36S)-20-[(2S)-3-amino-2-hydroxypropyl]-21-methoxy-14-methyl-8,15-dimethylidene-2,19,30,34,37,39,40,41-octaoxanonacyclo[24.9.2.1~3,32~.1~3,33~.1~6,9~.1~12,16~.0~18,22~.0~29,36~.0~31,35~]hentetracontan-24-one (non-preferred name), 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Doodhi, H, Prota, A.E, Rodriguez-Garcia, R, Xiao, H, Custar, D.W, Bargsten, K, Katrukha, E.A, Hilbert, M, Hua, S, Jiang, K, Grigoriev, I, Yang, C.-P.H, Cox, D, Band Horwitz, S, Kapitein, L.C, Akhmanova, A, Steinmetz, M.O.
登録日2016-04-20
公開日2016-06-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Termination of Protofilament Elongation by Eribulin Induces Lattice Defects that Promote Microtubule Catastrophes.
Curr.Biol., 26, 2016
3RO5
DownloadVisualize
BU of 3ro5 by Molmil
Crystal structure of influenza A virus nucleoprotein with ligand
分子名称: Nucleocapsid protein, [4-(2-chloro-4-nitrophenyl)piperazin-1-yl][3-(2-methoxyphenyl)-5-methyl-1,2-oxazol-4-yl]methanone
著者Pearce, B.C, Edavettal, S, McDonnell, P.A, Lewis, H.A, Steinbacher, S, Baldwin, E.T, Langley, D.R, Maskos, K, Mortl, M, Kiefersauer, R.
登録日2011-04-25
公開日2011-09-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Inhibition of influenza virus replication via small molecules that induce the formation of higher-order nucleoprotein oligomers.
Proc.Natl.Acad.Sci.USA, 108, 2011
7X56
DownloadVisualize
BU of 7x56 by Molmil
A CBg-ParM filament with ADP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ParM/StbA family protein
著者Koh, A, Ali, S, Robinson, R, Narita, A.
登録日2022-03-04
公開日2023-03-08
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A new actin-like filament from Clostridium botulinum exhibits a new system of filament turn over
To Be Published
1HAY
DownloadVisualize
BU of 1hay by Molmil
Snapshots of serine protease catalysis: (B) acyl-enzyme intermediate between porcine pancreatic elastase and human beta-casomorphin-7 jumped to pH 10 for 10 seconds
分子名称: CALCIUM ION, ELASTASE 1, SULFATE ION
著者Wilmouth, R.C, Edman, K, Neutze, R, Wright, P.A, Clifton, I.J, Schneider, T.R, Schofield, C.J, Hajdu, J.
登録日2001-04-10
公開日2001-08-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献X-Ray Snapshots of Serine Protease Catalysis Reveal a Tetrahedral Intermediate
Nat.Struct.Biol., 8, 2001
3RPO
DownloadVisualize
BU of 3rpo by Molmil
CDK2 in complex with inhibitor KVR-1-156
分子名称: 1,2-ETHANEDIOL, 4-({4-carbamoyl-2-nitro-5-[(pyridin-3-ylmethyl)amino]phenyl}amino)butanoic acid, Cyclin-dependent kinase 2
著者Betzi, S, Alam, R, Han, H, Becker, A, Schonbrunn, E.
登録日2011-04-27
公開日2012-08-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure-guided optimization of novel CDK2 inhibitors discovered by high-throughput screening
To be Published
5JMZ
DownloadVisualize
BU of 5jmz by Molmil
Carbonic Anhydrase IX-mimic IN Complex WITH U-NO2
分子名称: 4-{[(3-nitrophenyl)carbamoyl]amino}benzenesulfonamide, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
著者McKenna, R, Mboge, M.Y, Mahon, B.P.
登録日2016-04-29
公開日2017-05-03
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Carbonic Anhydrase IX-mimic IN Complex WITH U-NO2
To Be Published
2IM8
DownloadVisualize
BU of 2im8 by Molmil
X-Ray Crystal Structure of Protein yppE from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR213.
分子名称: Hypothetical protein yppE, PHOSPHATE ION
著者Kuzin, A.P, Shastry, R, Janjua, H, Cunningham, K, Ma, L.C, Xiao, R, Liu, J, Hang, D, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2006-10-03
公開日2006-10-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-Ray structure of hypothetical protein yPPE. Northeast Structural Genomics Consortium target SR213.
To be Published
7X59
DownloadVisualize
BU of 7x59 by Molmil
A CBg-ParM filament with GTP or GDPPi
分子名称: GUANOSINE-5'-TRIPHOSPHATE, ParM/StbA family protein
著者Koh, A, Ali, S, Robinson, R, Narita, A.
登録日2022-03-04
公開日2023-03-08
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献A new actin-like filament from Clostridium botulinum exhibits a new system of filament turn over
To Be Published
3R71
DownloadVisualize
BU of 3r71 by Molmil
CDK2 in complex with inhibitor KVR-1-162
分子名称: 1,2-ETHANEDIOL, 4-[(3-methoxypropyl)amino]-5-nitro-2-[(pyridin-3-ylmethyl)amino]benzamide, Cyclin-dependent kinase 2
著者Betzi, S, Alam, R, Han, H, Becker, A, Schonbrunn, E.
登録日2011-03-22
公開日2012-08-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure-guided optimization of novel CDK2 inhibitors discovered by high-throughput screening
To be Published
7X54
DownloadVisualize
BU of 7x54 by Molmil
A CBg-ParM filament with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ParM/StbA family protein
著者Koh, A, Ali, S, Robinson, R, Narita, A.
登録日2022-03-04
公開日2023-03-08
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献A new actin-like filament from Clostridium botulinum exhibits a new system of filament turn over
To Be Published
5JN6
DownloadVisualize
BU of 5jn6 by Molmil
The NMR Solution Structure of RPA3313
分子名称: Uncharacterized protein
著者Catazaro, J, Lowe, A.J, Powers, R, Structural Genomics Consortium (SGC)
登録日2016-04-29
公開日2016-05-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The NMR solution structure and function of RPA3313: a putative ribosomal transport protein from Rhodopseudomonas palustris.
Proteins, 85, 2017

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon