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PDB: 27265 件

5ZLU
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Ribosome Structure bound to ABC-F protein.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Su, W.X, Kumar, V, Ero, R, Andrew, S.W.W, Jian, S, Yong-Gui, G.
登録日2018-03-29
公開日2018-08-01
最終更新日2019-12-04
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Ribosome protection by antibiotic resistance ATP-binding cassette protein.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6TIR
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BU of 6tir by Molmil
NOE based model of hVDAC-1 bound to beta-NADH in detergent micelles
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Voltage-dependent anion-selective channel protein 1
著者Boehm, R, Hiller, S, Wagner, G.
登録日2019-11-22
公開日2019-12-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Structural Basis for Low Conductance in the Membrane Protein VDAC upon beta-NADH Binding and Voltage Gating.
Structure, 28, 2020
5BOK
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Ferredoxin component of 3-nitrotoluene dioxygenase from Diaphorobacter sp. strain DS2
分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin
著者Ramaswamy, S, Kumari, A, Singh, D, Gurunath, R.
登録日2015-05-27
公開日2016-07-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Ferredoxin component of 3-nitrotoluene dioxygenase from Diaphorobacter sp. strain DS2
To Be Published
5YZD
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BU of 5yzd by Molmil
Crystal structure of the prefusion form of measles virus fusion protein in complex with a fusion inhibitor peptide (FIP)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, glycoprotein F1,measles virus fusion protein, ...
著者Hashiguchi, T, Fukuda, Y, Matsuoka, R, Kuroda, D, Kubota, M, Shirogane, Y, Watanabe, S, Tsumoto, K, Kohda, D, Plemper, R.K, Yanagi, Y.
登録日2017-12-14
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.636 Å)
主引用文献Structures of the prefusion form of measles virus fusion protein in complex with inhibitors.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5Z40
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Crystal structure of pyrrolidone carboxylate peptidase I from Deionococcus radiodurans R1
分子名称: Pyrrolidone-carboxylate peptidase
著者Agrawal, R, Kumar, A, Makde, R.D.
登録日2018-01-09
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.837 Å)
主引用文献Crystal structures of pyrrolidone carboxylate peptidase I from Deionococcus radiodurans reveal the mechanism of L-pyroglutamate recognition
To Be Published
5Z7P
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SmChiA sliding-intermediate with chitotriose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A, GLYCEROL
著者Nakamura, A, Iino, R.
登録日2018-01-30
公開日2018-09-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Processive chitinase is Brownian monorail operated by fast catalysis after peeling rail from crystalline chitin.
Nat Commun, 9, 2018
5ZA4
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BU of 5za4 by Molmil
Crystal structure of Sialic acid Binding protein from Haemophilus ducreyi
分子名称: Putative ABC transporter periplasmic binding protein
著者Setty, T.G, Subramanian, R.
登録日2018-02-06
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.193 Å)
主引用文献Molecular characterization of the interaction of sialic acid with the periplasmic binding protein fromHaemophilus ducreyi.
J. Biol. Chem., 293, 2018
5Z5X
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HVF18 in complex with LPS micelles
分子名称: Peptide from Prothrombin
著者Saravanan, R, Schmidtchen, A.
登録日2018-01-21
公開日2018-03-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for endotoxin neutralisation and anti-inflammatory activity of thrombin-derived C-terminal peptides.
Nat Commun, 9, 2018
6TJP
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BU of 6tjp by Molmil
Crystal structure of T7 bacteriophage portal protein, 13mer, closed valve - P212121
分子名称: Portal protein
著者Fabrega-Ferrer, M, Cuervo, A, Fernandez, F.J, Machon, C, Perez-Luque, R, Pous, J, Vega, M.C, Carrascosa, J.L, Coll, M.
登録日2019-11-26
公開日2020-12-16
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.74 Å)
主引用文献Using a partial atomic model from medium-resolution cryo-EM to solve a large crystal structure.
Acta Crystallogr D Struct Biol, 77, 2021
5ZFP
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Structure of the ExbB/ExbD hexameric complex
分子名称: Biopolymer transport protein ExbB
著者Maki-Yonekura, S, Matsuoka, R, Yonekura, K.
登録日2018-03-06
公開日2018-05-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Hexameric and pentameric complexes of the ExbBD energizer in the Ton system.
Elife, 7, 2018
5ZL1
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Hexameric structure of copper-containing nitrite reductase of an anammox organism KSU-1
分子名称: CALCIUM ION, COPPER (II) ION, Putative copper-type nitrite reductase, ...
著者Hira, D, Matsumura, M, Kitamura, R, Fujii, T.
登録日2018-03-26
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Hexameric structure of copper-containing nitrite reductase of an anammox organism KSU-1
To Be Published
2Q0Q
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BU of 2q0q by Molmil
Structure of the Native M. Smegmatis Aryl Esterase
分子名称: GLYCEROL, SULFATE ION, aryl esterase
著者Mathews, I.I, Soltis, M, Saldajeno, M, Ganshaw, G, Sala, R, Weyler, W, Cervin, M.A, Whited, G, Bott, R.
登録日2007-05-22
公開日2007-12-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a novel enzyme that catalyzes acyl transfer to alcohols in aqueous conditions.
Biochemistry, 46, 2007
5ZK3
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BU of 5zk3 by Molmil
Crystal structure of rationally thermostabilized M2 muscarinic acetylcholine receptor bound with QNB
分子名称: (3R)-1-azabicyclo[2.2.2]oct-3-yl hydroxy(diphenyl)acetate, Muscarinic acetylcholine receptor M2,Apo-cytochrome b562,Muscarinic acetylcholine receptor M2
著者Suno, R, Maeda, S, Yasuda, S, Yamashita, K, Hirata, K, Horita, S, Tawaramoto, M.S, Tsujimoto, H, Murata, T, Kinoshita, M, Yamamoto, M, Kobilka, B.K, Iwata, S, Kobayashi, T.
登録日2018-03-23
公開日2018-11-21
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural insights into the subtype-selective antagonist binding to the M2muscarinic receptor
Nat. Chem. Biol., 14, 2018
5ZL9
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BU of 5zl9 by Molmil
Engineered chitinase, SmChiAB-FYSFV
分子名称: Chitinase AB, GLYCEROL
著者Kawai, F, Nakamura, A, Iino, R.
登録日2018-03-27
公開日2018-07-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Engineered chitinase, SmChiAB-FYSFV
Acs Omega, 2018
2KEW
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BU of 2kew by Molmil
The solution structure of Bacillus subtilis SR211 START domain by NMR spectroscopy
分子名称: Uncharacterized protein yndB
著者Mercier, K.A, Mueller, G.A, Powers, R, Acton, T.B, Ciano, M, Ho, C, Lui, J, Ma, L, Rost, B, Rossi, R, Xiao, R, Northeast Structural Genomics Consortium (NESG)
登録日2009-02-05
公開日2009-03-17
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献(1)H, (13)C, and (15)N NMR assignments for the Bacillus subtilis yndB START domain.
Biomol.Nmr Assign., 3, 2009
5YZC
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BU of 5yzc by Molmil
Crystal structure of the prefusion form of measles virus fusion protein in complex with a fusion inhibitor compound (AS-48)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-nitro-2-[(phenylacetyl)amino]benzamide, ...
著者Hashiguchi, T, Fukuda, Y, Matsuoka, R, Kuroda, D, Kubota, M, Shirogane, Y, Watanabe, S, Tsumoto, K, Kohda, D, Plemper, R.K, Yanagi, Y.
登録日2017-12-14
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.334 Å)
主引用文献Structures of the prefusion form of measles virus fusion protein in complex with inhibitors.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4M51
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BU of 4m51 by Molmil
Crystal structure of amidohydrolase nis_0429 (ser145ala mutant) from nitratiruptor sp. sb155-2
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Amidohydrolase family protein, BENZOIC ACID, ...
著者Patskovsky, Y, Toro, R, Gobble, A, Raushel, F.M, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2013-08-07
公開日2013-09-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Deamination of 6-aminodeoxyfutalosine in menaquinone biosynthesis by distantly related enzymes.
Biochemistry, 52, 2013
5ZNH
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BU of 5znh by Molmil
Catechol 2,3-dioxygenase with 4-methyl catechol from Diaphorobacter sp DS2
分子名称: 1,2-ETHANEDIOL, 4-METHYLCATECHOL, CALCIUM ION, ...
著者Mishra, K, Arya, C.K, Subramaniyan, R, Ramanathan, G.
登録日2018-04-09
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献catechol 2,3-dioxygenase with 4-methyl catechol from Diaphorobacter sp DS2
To Be Published
7WWV
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BU of 7wwv by Molmil
DNA bound-ICP1 Csy complex
分子名称: Csy1, Csy2, Csy3, ...
著者Zhang, M, Peng, R.
登録日2022-02-14
公開日2023-04-26
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Mechanistic insights into DNA binding and cleavage by a compact type I-F CRISPR-Cas system in bacteriophage.
Proc.Natl.Acad.Sci.USA, 120, 2023
7WWU
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BU of 7wwu by Molmil
ICP1 Csy complex
分子名称: Csy1, Csy2, Csy3, ...
著者Zhang, M, Peng, R.
登録日2022-02-14
公開日2023-04-26
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Mechanistic insights into DNA binding and cleavage by a compact type I-F CRISPR-Cas system in bacteriophage.
Proc.Natl.Acad.Sci.USA, 120, 2023
5Z99
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Crystal structure of Sialic acid Binding protein from Haemophilus ducreyi with Neu5Ac
分子名称: N-acetyl-beta-neuraminic acid, Putative ABC transporter periplasmic binding protein
著者Subramanian, R, Setty, T.G.
登録日2018-02-02
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.494 Å)
主引用文献Molecular characterization of the interaction of sialic acid with the periplasmic binding protein fromHaemophilus ducreyi.
J. Biol. Chem., 293, 2018
1N6F
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tricorn protease in complex with Z-Phe-diketo-Arg-Glu-Phe
分子名称: 4-[2-(3-BENZYLOXYCARBONYLAMINO-4-CYCLOHEXYL-1-HYDROXY-2-OXO-BUTYLAMINO)-5-GUANIDINO-PENTANOYLAMINO]-4-(1-CARBOXY-2-CYCLOHEXYL-ETHYLCARBAMOYL)-BUTYRIC ACID, tricorn protease
著者Kim, J.-S, Groll, M, Huber, R, Brandstetter, H.
登録日2002-11-10
公開日2002-12-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Navigation Inside a Protease: Substrate Selection and Product Exit in the Tricorn Protease from Thermoplasma acidophilum
J.Mol.Biol., 324, 2002
5ZFV
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Structure of the ExbB/ExbD pentameric complex (ExbB5ExbD1TM)
分子名称: 22-mer peptide from Biopolymer transport protein ExbD, Biopolymer transport protein ExbB
著者Yonekura, K, Yamashita, Y, Matsuoka, R, Maki-Yonekura, S.
登録日2018-03-07
公開日2018-05-09
実験手法ELECTRON MICROSCOPY (7.1 Å)
主引用文献Hexameric and pentameric complexes of the ExbBD energizer in the Ton system.
Elife, 7, 2018
5ZK4
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BU of 5zk4 by Molmil
The structure of DSZS acyltransferase with carrier protein
分子名称: DisA protein, DisD protein, N-[2-(acetylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide, ...
著者Miyanaga, A, Ouchi, R, Kudo, F, Eguchi, T.
登録日2018-03-23
公開日2018-06-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structural basis of protein-protein interactions between a trans-acting acyltransferase and acyl carrier protein in polyketide disorazole biosynthesis
J. Am. Chem. Soc., 140, 2018
1N6U
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NMR structure of the interferon-binding ectodomain of the human interferon receptor
分子名称: Interferon-alpha/beta receptor beta chain
著者Chill, J.H, Quadt, S.R, Levy, R, Schreiber, G, Anglister, J.
登録日2002-11-12
公開日2003-07-15
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献The human type I interferon receptor. NMR structure reveals the molecular basis of ligand binding.
Structure, 11, 2003

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