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PDB: 27265 件
6Y2Q
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Escherichia coli RnlA endoribonuclease
分子名称: CHLORIDE ION, mRNA endoribonuclease toxin LS
著者Garcia-Rodriguez, G, Loris, R.
登録日2020-02-17
公開日2021-05-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Alternative dimerization is required for activity and inhibition of the HEPN ribonuclease RnlA.
Nucleic Acids Res., 49, 2021
7ZV5
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Crystal structure of SARS Cov-2 main protease in complex with an inhibitor 4
分子名称: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, inhibitor TRIP5
著者Rahimova, R, Di Micco, S, Marquez, J.A.
登録日2022-05-13
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Rational design of the zonulin inhibitor AT1001 derivatives as potential anti SARS-CoV-2.
Eur.J.Med.Chem., 244, 2022
6YQ5
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Hybrid structure of the SPP1 tail tube by solid-state NMR and cryo EM - NMR Ensemble
分子名称: Tail tube protein gp17.1*
著者Zinke, M, Sachowsky, K.A.A, Zinn-Justin, S, Ravelli, R, Schroder, G.F, Habeck, M, Lange, A.
登録日2020-04-16
公開日2020-10-14
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4 Å), SOLID-STATE NMR
主引用文献Architecture of the flexible tail tube of bacteriophage SPP1.
Nat Commun, 11, 2020
6YVW
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HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with monocyclic BB-328
分子名称: 4-[(5-bromanyl-4,6-dimethyl-pyridin-2-yl)amino]-4-oxidanylidene-butanoic acid, Egl nine homolog 1, FE (III) ION, ...
著者Chowdhury, R, Banerji, B, Schofield, C.J.
登録日2020-04-28
公開日2020-12-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2.
Sci Rep, 10, 2020
6YW1
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HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with 2OG and RaPID-derived silent allosteric cyclic peptide 3C (14-mer)
分子名称: 2-OXOGLUTARIC ACID, BICARBONATE ION, Egl nine homolog 1, ...
著者Chowdhury, R, Schofield, C.J.
登録日2020-04-29
公開日2020-12-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2.
Sci Rep, 10, 2020
3W63
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MamM-CTD 215-293
分子名称: Magnetosome protein MamM, SULFATE ION
著者Zeytuni, N, Davidov, G, Zarivach, R.
登録日2013-02-10
公開日2014-04-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Cation diffusion facilitators transport initiation and regulation is mediated by cation induced conformational changes of the cytoplasmic domain
Plos One, 9, 2014
6YW3
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HIF PROLYL HYDROXYLASE 2 (PHD2/ EGLN1) in complex with N-Oxalyl Glycine (NOG), HIF-1ALPHA CODD (556-574) and a RaPID-derived cyclic peptide 3C (14-mer)
分子名称: Egl nine homolog 1, GLYCEROL, Hypoxia-inducible factor 1-alpha, ...
著者Chowdhury, R, Schofield, C.J.
登録日2020-04-29
公開日2020-12-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.279 Å)
主引用文献Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2.
Sci Rep, 10, 2020
3W5Y
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MamM-CTD
分子名称: Magnetosome protein MamM, SULFATE ION
著者Zeytuni, N, Davidov, G, Zarivach, R.
登録日2013-02-10
公開日2014-04-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Cation diffusion facilitators transport initiation and regulation is mediated by cation induced conformational changes of the cytoplasmic domain
Plos One, 9, 2014
3W65
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MamM-CTD D249A and H264A
分子名称: Magnetosome protein MamM, SULFATE ION
著者Zeytuni, N, Davidov, G, Zarivach, R.
登録日2013-02-10
公開日2014-04-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Cation diffusion facilitators transport initiation and regulation is mediated by cation induced conformational changes of the cytoplasmic domain
Plos One, 9, 2014
2WF3
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Human BACE-1 in complex with 6-(ethylamino)-N-((1S,2R)-2-hydroxy-3-(((3-(methyloxy)phenyl)methyl)amino)-1-(phenylmethyl)propyl)-1-methyl-1, 3,4,5-tetrahydro-2,1-benzothiazepine-8-carboxamide 2,2-dioxide
分子名称: BETA-SECRETASE 1, GLYCEROL, N-{(1S,2R)-1-BENZYL-2-HYDROXY-3-[(3-METHOXYBENZYL)AMINO]PROPYL}-6-(ETHYLAMINO)-1-METHYL-1,3,4,5-TETRAHYDRO-2,1-BENZOTHIAZEPINE-8-CARBOXAMIDE 2,2-DIOXIDE
著者Charrier, N, Clarke, B, Demont, E, Dingwall, C, Dunsdon, R, Hawkins, J, Hubbard, J, Hussain, I, Maile, G, Matico, R, Mosley, J, Naylor, A, O'Brien, A, Redshaw, S, Rowland, P, Soleil, V, Smith, K.J, Sweitzer, S, Theobald, P, Vesey, D, Walter, D.S, Wayne, G.
登録日2009-04-02
公開日2009-05-19
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Second Generation of Bace-1 Inhibitors Part 2: Optimisation of the Non-Prime Side Substituent.
Bioorg.Med.Chem.Lett., 19, 2009
8APX
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CryoEM structure of the Chikungunya virus nsP1 capping pores in covalent complex with a 7GMP cap structure
分子名称: Polyprotein P1234, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Jones, R, Hons, M, Reguera, J.
登録日2022-08-10
公開日2023-05-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis and dynamics of Chikungunya alphavirus RNA capping by nsP1 capping pores.
Proc.Natl.Acad.Sci.USA, 120, 2023
2PKV
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D-(GGTATACC) ambient pressure
分子名称: 5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3'
著者Girard, E, Prange, T, Kahn, R, Fourme, R.
登録日2007-04-18
公開日2007-07-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Adaptation of the base-paired double-helix molecular architecture to extreme pressure.
Nucleic Acids Res., 35, 2007
8AOV
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CryoEM structure of the Chikungunya virus nsP1 capping pores in complex with GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, ZINC ION, mRNA-capping enzyme nsP1
著者Jones, R, Hons, M, Reguera, J.
登録日2022-08-08
公開日2023-05-31
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.48 Å)
主引用文献Structural basis and dynamics of Chikungunya alphavirus RNA capping by nsP1 capping pores.
Proc.Natl.Acad.Sci.USA, 120, 2023
6YVZ
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HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with bicyclic JLS-367
分子名称: 4-[(5-bromanylisoquinolin-3-yl)amino]-4-oxidanylidene-butanoic acid, BICARBONATE ION, Egl nine homolog 1, ...
著者Chowdhury, R, Sorensen, J.L, Schofield, C.J.
登録日2020-04-29
公開日2020-12-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2.
Sci Rep, 10, 2020
8APU
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Crystal Structure of H. influenzae TrmD in complex with Compound 14
分子名称: 6-[[4-(aminomethyl)phenyl]methylamino]pyridine-3-carboxamide, CITRIC ACID, tRNA (guanine-N(1)-)-methyltransferase
著者Hall, G, Cowan, R, Carr, M.D.
登録日2022-08-10
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Evaluating the druggability of TrmD, a potential antibacterial target, through design and microbiological profiling of a series of potent TrmD inhibitors.
Bioorg.Med.Chem.Lett., 90, 2023
2W23
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Structure of mutant W169Y of Pleurotus eryngii versatile peroxidase (VP)
分子名称: CALCIUM ION, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Ruiz-Duenas, F.J, Pogni, R, Morales, M, Giansanti, S, Mate, M.J, Romero, A, Martinez, M.J, Basosi, R, Martinez, A.T.
登録日2008-10-23
公開日2009-01-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Protein Radicals in Fungal Versatile Peroxidase: Catalytic Tryptophan Radical in Both Compound I and Compound II and Studies on W164Y, W164H, and W164S Variants.
J.Biol.Chem., 284, 2009
8APT
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Crystal Structure of H. influenzae TrmD in complex with Compound 13
分子名称: 6-[[3-(aminomethyl)phenyl]methylamino]pyridine-3-carboxamide, CITRIC ACID, tRNA (guanine-N(1)-)-methyltransferase
著者Hall, G, Cowan, R, Carr, M.D.
登録日2022-08-10
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Evaluating the druggability of TrmD, a potential antibacterial target, through design and microbiological profiling of a series of potent TrmD inhibitors.
Bioorg.Med.Chem.Lett., 90, 2023
8APV
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Crystal Structure of H. influenzae TrmD in complex with Compound 27
分子名称: 1-[[4-(aminomethyl)phenyl]methyl]pyrrolo[2,3-b]pyridine-5-carboxamide, CITRIC ACID, tRNA (guanine-N(1)-)-methyltransferase
著者Hall, G, Cowan, R, Carr, M.D.
登録日2022-08-10
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Evaluating the druggability of TrmD, a potential antibacterial target, through design and microbiological profiling of a series of potent TrmD inhibitors.
Bioorg.Med.Chem.Lett., 90, 2023
8APW
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Crystal Structure of H. influenzae TrmD in complex with Compound 30
分子名称: 1-[2-oxidanylidene-2-(piperidin-4-ylamino)ethyl]pyrrolo[2,3-b]pyridine-5-carboxamide, CITRIC ACID, tRNA (guanine-N(1)-)-methyltransferase
著者Hall, G, Cowan, R, Carr, M.D.
登録日2022-08-10
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Evaluating the druggability of TrmD, a potential antibacterial target, through design and microbiological profiling of a series of potent TrmD inhibitors.
Bioorg.Med.Chem.Lett., 90, 2023
8AIN
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MCUGI SAUNG complex
分子名称: 1,2-ETHANEDIOL, MCUGI, SULFATE ION, ...
著者Muselmani, W, Savva, R.
登録日2022-07-26
公開日2023-06-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A Multimodal Approach towards Genomic Identification of Protein Inhibitors of Uracil-DNA Glycosylase.
Viruses, 15, 2023
8AIM
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Ugi-2 SAUNG complex
分子名称: Uracil-DNA glycosylase, Uracil-DNA glycosylase inhibitor
著者Muselmani, W, Savva, R.
登録日2022-07-26
公開日2023-06-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A Multimodal Approach towards Genomic Identification of Protein Inhibitors of Uracil-DNA Glycosylase.
Viruses, 15, 2023
8AIL
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BU of 8ail by Molmil
Bacillus phage VMY22 p56 in complex with Bacillus weidmannii Ung
分子名称: Bacillus phage VMY22 p56, GLYCEROL, IODIDE ION, ...
著者Muselmani, W, Bagneris, C, Savva, R.
登録日2022-07-26
公開日2023-06-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献A Multimodal Approach towards Genomic Identification of Protein Inhibitors of Uracil-DNA Glycosylase.
Viruses, 15, 2023
3JXJ
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Crystal structure of the chicken TRPV4 ankyrin repeat domain
分子名称: PHOSPHATE ION, Vanilloid receptor-related osmotically activated channel protein
著者Phelps, C.B, Choo, S.S, Gaudet, R.
登録日2009-09-19
公開日2009-12-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mutations in TRPV4 cause Charcot-Marie-Tooth disease type 2C.
Nat.Genet., 42, 2010
6YW0
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Lysine-N,N-Dimethylated HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with BB-287
分子名称: 4-(isoquinolin-3-ylamino)-4-oxobutanoic acid, BICARBONATE ION, Egl nine homolog 1, ...
著者Chowdhury, R, Schofield, C.J.
登録日2020-04-29
公開日2020-12-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2.
Sci Rep, 10, 2020
2VEV
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CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE 1B IN COMPLEX WITH AN ISOTHIAZOLIDINONE-CONTAINING INHIBITOR
分子名称: MAGNESIUM ION, N-[(1S)-1-(4-benzyl-1H-imidazol-2-yl)-2-{4-[(5S)-1,1-dioxido-3-oxoisothiazolidin-5-yl]phenyl}ethyl]-3-(trifluoromethyl)benzenesulfonamide, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1
著者Douty, B, Wayland, B, Ala, P.J, Bower, M.J, Pruitt, J, Bostrom, L, Wei, M, Klabe, R, Gonneville, L, Wynn, R, Burn, T.C, Liu, P.C.C, Combs, A.P, Yue, E.W.
登録日2007-10-27
公開日2007-11-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Isothiazolidinone Inhibitors of Ptp1B Containing Imidazoles and Imidazolines
Bioorg.Med.Chem.Lett., 18, 2008

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