Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27265 件

1J5A
DownloadVisualize
BU of 1j5a by Molmil
STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIA
分子名称: 23S RRNA, CLARITHROMYCIN, MAGNESIUM ION, ...
著者Schluenzen, F, Zarivach, R, Harms, J, Bashan, A, Tocilj, A, Albrecht, R, Yonath, A, Franceschi, F.
登録日2002-03-06
公開日2002-03-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria.
Nature, 413, 2001
6GQG
DownloadVisualize
BU of 6gqg by Molmil
Structure of GFPmut2 crystallized at pH 8.5
分子名称: CALCIUM ION, Green fluorescent protein
著者Pasqualetto, E, Lolli, G, Battistutta, R.
登録日2018-06-07
公開日2018-12-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.792 Å)
主引用文献Insight into GFPmut2 pH Dependence by Single Crystal Microspectrophotometry and X-ray Crystallography.
J.Phys.Chem.B, 122, 2018
6K79
DownloadVisualize
BU of 6k79 by Molmil
Glycerol kinase form Thermococcus kodakarensis, complex structure with substrate.
分子名称: GLYCEROL, Glycerol kinase, TRIETHYLENE GLYCOL
著者Koga, Y, Angkawidjaja, C, Matsumura, H, Hokao, R.
登録日2019-06-06
公開日2020-06-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structural analysis of hexameric structure of glycerol kinase from Thermococcus kodakaraeinsis KOD1
To Be Published
1Z30
DownloadVisualize
BU of 1z30 by Molmil
NMR structure of the apical part of stemloop D from cloverleaf 1 of bovine enterovirus 1 RNA
分子名称: 5'-R(*GP*GP*CP*GP*UP*UP*CP*GP*UP*UP*AP*GP*AP*AP*CP*GP*UP*C)-3'
著者Ihle, Y, Ohlenschlager, O, Duchardt, E, Ramachandran, R, Gorlach, M.
登録日2005-03-10
公開日2005-04-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献A novel cGUUAg tetraloop structure with a conserved yYNMGg-type backbone conformation from cloverleaf 1 of bovine enterovirus 1 RNA
Nucleic Acids Res., 33, 2005
2F8E
DownloadVisualize
BU of 2f8e by Molmil
Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with uridylylated VPg protein
分子名称: MAGNESIUM ION, MANGANESE (II) ION, RNA-dependent RNA polymerase, ...
著者Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
登録日2005-12-02
公開日2006-03-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The structure of a protein primer-polymerase complex in the initiation of genome replication
Embo J., 25, 2006
5HPF
DownloadVisualize
BU of 5hpf by Molmil
Crystal Structure of the Double Mutant of PobR Transcription Factor Inducer Binding Domain from Acinetobacter
分子名称: CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ...
著者Kim, Y, Tesar, C, Jedrejczak, R, Jha, R, Strauss, C.E.M, Joachimiak, A.
登録日2016-01-20
公開日2016-09-07
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.309 Å)
主引用文献A microbial sensor for organophosphate hydrolysis exploiting an engineered specificity switch in a transcription factor.
Nucleic Acids Res., 44, 2016
6K78
DownloadVisualize
BU of 6k78 by Molmil
Glycerol kinase form Thermococcus kodakarensis, complex structure with substrate.
分子名称: GLYCEROL, Glycerol kinase, TRIETHYLENE GLYCOL
著者Koga, Y, Angkawidjaja, C, Matsumura, H, Hokao, R.
登録日2019-06-06
公開日2020-06-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Structural analysis of hexameric structure of glycerol kinase from Thermococcus kodakaraeinsis KOD1
To Be Published
1JQ7
DownloadVisualize
BU of 1jq7 by Molmil
HCMV protease dimer-interface mutant, S225Y complexed to Inhibitor BILC 408
分子名称: ASSEMBLIN, N-(6-aminohexanoyl)-3-methyl-L-valyl-3-methyl-L-valyl-N~1~-[(2S,3S)-3-hydroxy-4-oxo-4-{[(1R)-1-phenylpropyl]amino}butan-2-yl]-N~4~,N~4~-dimethyl-L-aspartamide
著者Batra, R, Khayat, R, Tong, L.
登録日2001-08-03
公開日2001-09-12
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Molecular mechanism for dimerization to regulate the catalytic activity of human cytomegalovirus protease.
Nat.Struct.Biol., 8, 2001
1TMQ
DownloadVisualize
BU of 1tmq by Molmil
STRUCTURE OF TENEBRIO MOLITOR LARVAL ALPHA-AMYLASE IN COMPLEX WITH RAGI BIFUNCTIONAL INHIBITOR
分子名称: CALCIUM ION, CHLORIDE ION, PROTEIN (ALPHA-AMYLASE), ...
著者Gomis-Rueth, F.X, Strobl, S, Glockshuber, R.
登録日1998-01-13
公開日1999-03-02
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A novel strategy for inhibition of alpha-amylases: yellow meal worm alpha-amylase in complex with the Ragi bifunctional inhibitor at 2.5 A resolution.
Structure, 6, 1998
1MSC
DownloadVisualize
BU of 1msc by Molmil
CRYSTAL STRUCTURE OF MS2 COAT PROTEIN DIMER
分子名称: BACTERIOPHAGE MS2 COAT PROTEIN
著者Ni, C.-Z, Kodandapani, R, Ely, K.R.
登録日1995-04-28
公開日1995-07-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the MS2 coat protein dimer: implications for RNA binding and virus assembly.
Structure, 3, 1995
1JZZ
DownloadVisualize
BU of 1jzz by Molmil
Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria
分子名称: 23S rRNA, MAGNESIUM ION, ROXITHROMYCIN, ...
著者Schluenzen, F, Zarivach, R, Harms, J, Bashan, A, Tocilj, A, Albrecht, R, Yonath, A, Franceschi, F.
登録日2001-09-17
公開日2001-10-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria.
Nature, 413, 2001
6K76
DownloadVisualize
BU of 6k76 by Molmil
Glycerol kinase form Thermococcus kodakarensis, complex structure with substrate.
分子名称: Glycerol kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Koga, Y, Angkawidjaja, C, Matsumura, H, Hokao, R.
登録日2019-06-06
公開日2020-06-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural analysis of hexameric structure of glycerol kinase from Thermococcus kodakaraeinsis KOD1
To Be Published
3LMB
DownloadVisualize
BU of 3lmb by Molmil
The crystal structure of the protein OLEI01261 with unknown function from Chlorobaculum tepidum TLS
分子名称: Uncharacterized protein
著者Zhang, R, Evdokimova, E, Egorova, O, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2010-01-29
公開日2010-03-16
最終更新日2013-08-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica.
Nat Commun, 4, 2013
1LU0
DownloadVisualize
BU of 1lu0 by Molmil
Atomic Resolution Structure of Squash Trypsin Inhibitor: Unexpected Metal Coordination
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, GLYCEROL, SULFATE ION, ...
著者Thaimattam, R, Tykarska, E, Bierzynski, A, Sheldrick, G.M, Jaskolski, M.
登録日2002-05-21
公開日2002-08-28
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Atomic resolution structure of squash trypsin inhibitor: unexpected metal coordination.
Acta Crystallogr.,Sect.D, 58, 2002
4NYF
DownloadVisualize
BU of 4nyf by Molmil
HIV integrase in complex with inhibitor
分子名称: (2S)-tert-butoxy[4-(4-chlorophenyl)-2-methylquinolin-3-yl]ethanoic acid, CADMIUM ION, Integrase
著者Coulombe, R, Fader, L.
登録日2013-12-10
公開日2014-06-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Discovery of BI 224436, a Noncatalytic Site Integrase Inhibitor (NCINI) of HIV-1.
ACS Med Chem Lett, 5, 2014
1IEC
DownloadVisualize
BU of 1iec by Molmil
CRYSTAL STRUCTURE OF THE CATALYTIC SITE MUTANT (H157A) OF THE HUMAN CYTOMEGALOVIRUS PROTEASE
分子名称: CAPSID PROTEIN P40: ASSEMBLIN PROTEASE
著者Khayat, R, Batra, R, Massariol, M.J, Lagace, L, Tong, L.
登録日2001-04-09
公開日2001-06-06
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Investigating the role of histidine 157 in the catalytic activity of human cytomegalovirus protease.
Biochemistry, 40, 2001
1E0W
DownloadVisualize
BU of 1e0w by Molmil
Xylanase 10A from Sreptomyces lividans. native structure at 1.2 angstrom resolution
分子名称: ENDO-1,4-BETA-XYLANASE A
著者Ducros, V, Charnock, S.J, Derewenda, U, Derewenda, Z.S, Dauter, Z, Dupont, C, Shareck, F, Morosoli, R, Kluepfel, D, Davies, G.J.
登録日2000-04-10
公開日2001-04-05
最終更新日2014-02-05
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Substrate Specificity in Glycoside Hydrolase Family 10. Structural and Kinetic Analysis of the Streptomyces Lividans Xylanase 10A
J.Biol.Chem., 275, 2000
2ABZ
DownloadVisualize
BU of 2abz by Molmil
Crystal structure of C19A/C43A mutant of leech carboxypeptidase inhibitor in complex with bovine carboxypeptidase A
分子名称: Carboxypeptidase A1, Metallocarboxypeptidase inhibitor, ZINC ION
著者Arolas, J.L, Popowicz, G.M, Bronsoms, S, Aviles, F.X, Huber, R, Holak, T.A, Ventura, S.
登録日2005-07-18
公開日2006-01-31
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Study of a major intermediate in the oxidative folding of leech carboxypeptidase inhibitor: contribution of the fourth disulfide bond
J.Mol.Biol., 352, 2005
1M3S
DownloadVisualize
BU of 1m3s by Molmil
Crystal structure of YckF from Bacillus subtilis
分子名称: Hypothetical protein yckf
著者Sanishvili, R, Wu, R, Kim, D.E, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2002-06-28
公開日2003-01-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of Bacillus subtilis YckF: structural and functional evolution.
J.Struct.Biol., 148, 2004
4A2J
DownloadVisualize
BU of 4a2j by Molmil
PR X-Ray structures in agonist conformations reveal two different mechanisms for partial agonism in 11beta-substituted steroids
分子名称: 4-[(11BETA,17BETA)-17-METHOXY-17-(METHOXYMETHYL)-3-OXOESTRA-4,9-DIEN-11-YL]BENZALDEHYDE OXIME, PROGESTERONE RECEPTOR, SULFATE ION
著者Lusher, S.J, Raaijmakers, H.C.A, Bosch, R, Vu-Pham, D, McGuire, R, Oubrie, A, de Vlieg, J.
登録日2011-09-27
公開日2012-04-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray structures of progesterone receptor ligand binding domain in its agonist state reveal differing mechanisms for mixed profiles of 11 beta-substituted steroids.
J. Biol. Chem., 287, 2012
1LEB
DownloadVisualize
BU of 1leb by Molmil
SOLUTION STRUCTURE OF THE LEXA REPRESSOR DNA BINDING DETERMINED BY 1H NMR SPECTROSCOPY
分子名称: LEXA REPRESSOR DNA BINDING DOMAIN
著者Fogh, R.H, Ottleben, G, Rueterjans, H, Schnarr, M, Boelens, R, Kaptein, R.
登録日1994-05-11
公開日1994-08-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the LexA repressor DNA binding domain determined by 1H NMR spectroscopy.
EMBO J., 13, 1994
2CKJ
DownloadVisualize
BU of 2ckj by Molmil
Human milk xanthine oxidoreductase
分子名称: ACETIC ACID, FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Pearson, A.R, Godber, B.L.J, Eisenthal, R, Taylor, G.L, Harrison, R.
登録日2006-04-19
公開日2007-05-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.59 Å)
主引用文献Human Milk Xanthine Dehydrogenase is Incompletely Converted to the Oxidase Form in the Absence of Proteolysis. A Structural Explanation.
To be Published
1QO2
DownloadVisualize
BU of 1qo2 by Molmil
Crystal structure of N-((5'-phosphoribosyl)-formimino)-5-aminoimidazol-4-carboxamid ribonucleotid isomerase (EC 3.1.3.15, HisA)
分子名称:
著者Wilmanns, M, Lang, D, Thoma, R, Sterner, R.
登録日1999-11-01
公開日2000-07-12
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Evidence for Evolution of the Beta/Alpha-Barrel Scaffold by Repeated Gene Duplication and Fusion
Science, 289, 2000
2CMC
DownloadVisualize
BU of 2cmc by Molmil
Structural Basis for Inhibition of Protein Tyrosine Phosphatase 1B by Isothiazolidinone Heterocyclic Phosphonate Mimetics
分子名称: N-ACETYL-L-PHENYLALANYL-4-[DIFLUORO(PHOSPHONO)METHYL]-L-PHENYLALANINAMIDE, SULFATE ION, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1, ...
著者Ala, P.J, Gonneville, L, Hillman, M.C, Becker-Pasha, M, Wei, M, Reid, B.G, Klabe, R, Yue, E.W, Wayland, B, Douty, B, Combs, A.P, Polam, P, Wasserman, Z, Bower, M, Burn, T.C, Hollis, G.F, Wynn, R.
登録日2006-05-04
公開日2006-08-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for Inhibition of Protein-Tyrosine Phosphatase 1B by Isothiazolidinone Heterocyclic Phosphonate Mimetics.
J.Biol.Chem., 281, 2006
1E0X
DownloadVisualize
BU of 1e0x by Molmil
XYLANASE 10A FROM SREPTOMYCES LIVIDANS. XYLOBIOSYL-ENZYME INTERMEDIATE AT 1.65 A
分子名称: ENDO-1,4-BETA-XYLANASE A, GLYCEROL, beta-D-xylopyranose-(1-4)-2-deoxy-2-fluoro-alpha-D-xylopyranose
著者Ducros, V, Charnock, S.J, Derewenda, U, Derewenda, Z.S, Dauter, Z, Dupont, C, Shareck, F, Morosoli, R, Kluepfel, D, Davies, G.J.
登録日2000-04-10
公開日2001-04-05
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Substrate Specificity in Glycoside Hydrolase Family 10. Structural and Kinetic Analysis of the Streptomyces Lividans Xylanase 10A
J.Biol.Chem., 275, 2000

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon