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PDB: 27201 results

6E2Z
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Mechanism of cellular recognition by PCV2
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Capsid protein of PCV2
Authors:Khayat, R, Dhindwal, S.
Deposit date:2018-07-12
Release date:2018-12-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Porcine Circovirus 2 Uses a Multitude of Weak Binding Sites To Interact with Heparan Sulfate, and the Interactions Do Not Follow the Symmetry of the Capsid.
J.Virol., 93, 2019
1OV6
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M64V PNP + ALLO
Descriptor: 9-(6-DEOXY-BETA-D-ALLOFURANOSYL)-6-METHYLPURINE, PHOSPHATE ION, Purine nucleoside phosphorylase
Authors:Ealick, S.E, Bennett, E.M, Anand, R, Secrist, J.A, Parker, P.W, Hassan, A.E, Allan, P.W, McPherson, D.T, Sorscher, E.J.
Deposit date:2003-03-25
Release date:2004-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Designer gene therapy using an Escherichia coli purine nucleoside phosphorylase/prodrug system.
Chem.Biol., 10, 2003
1OWC
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Three Dimensional Structure Analysis Of The R109L Variant of the Type II Citrate Synthase From E. Coli
Descriptor: Citrate synthase, SULFATE ION
Authors:Stokell, D.J, Donald, L.J, Maurus, R, Nguyen, N.T, Sadler, G, Choudhary, K, Hultin, P.G, Brayer, G.D, Duckworth, H.W.
Deposit date:2003-03-28
Release date:2004-05-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Probing the roles of key residues in the unique regulatory NADH binding site of type II citrate synthase of Escherichia coli.
J.Biol.Chem., 278, 2003
6E8X
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CA IX mimic Complexed with Steroidal Sulfamate Compound STX 140
Descriptor: (13alpha,17alpha)-2-methoxyestra-1,3,5,7,9,11-hexaene-3,17-diyl disulfamate, Carbonic anhydrase 2, ZINC ION
Authors:Andring, J.T, Mckenna, R.
Deposit date:2018-07-31
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:3,17 beta-Bis-sulfamoyloxy-2-methoxyestra-1,3,5(10)-triene and Nonsteroidal Sulfamate Derivatives Inhibit Carbonic Anhydrase IX: Structure-Activity Optimization for Isoform Selectivity.
J. Med. Chem., 62, 2019
1WOY
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Crystal structure of methionyl tRNA synthetase Y225F mutant from Thermus thermophilus
Descriptor: Methionyl-tRNA synthetase, ZINC ION
Authors:Konno, M, Takeda, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-08-27
Release date:2005-09-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of methionyl tRNA synthetase Y225F mutant from Thermus thermophilus
TO BE PUBLISHED
6EGD
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Crystal structure of the unphosphorylated IRAK4 kinase domain Bound to a type I inhibitor
Descriptor: Interleukin-1 receptor-associated kinase 4, N-[2-methoxy-4-(morpholin-4-yl)phenyl]-2-(pyridin-3-yl)-1,3-thiazole-5-carboxamide
Authors:Ferrao, R, Wu, H.
Deposit date:2018-08-19
Release date:2019-02-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformational flexibility and inhibitor binding to unphosphorylated interleukin-1 receptor-associated kinase 4 (IRAK4).
J.Biol.Chem., 294, 2019
1OXE
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Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins
Descriptor: cyan fluorescent protein cfp
Authors:Hyun Bae, J, Rubini, M, Jung, G, Wiegand, G, Seifert, M.H, Azim, M.K, Kim, J.S, Zumbusch, A, Holak, T.A, Moroder, L, Huber, R, Budisa, N.
Deposit date:2003-04-02
Release date:2003-12-02
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins
J.Mol.Biol., 328, 2003
1P8V
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CRYSTAL STRUCTURE OF THE COMPLEX OF PLATELET RECEPTOR GPIB-ALPHA AND ALPHA-THROMBIN AT 2.6A
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIISOPROPYL PHOSPHONATE, ...
Authors:Dumas, J.J, Kumar, R, Seehra, J, Somers, W.S, Mosyak, L.
Deposit date:2003-05-07
Release date:2003-07-22
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the GpIbalpha-Thrombin Complex Essential for Platelet Aggregation
Science, 301, 2003
1P9K
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THE SOLUTION STRUCTURE OF YBCJ FROM E. COLI REVEALS A RECENTLY DISCOVERED ALFAL MOTIF INVOLVED IN RNA-BINDING
Descriptor: orf, hypothetical protein
Authors:Volpon, L, Lievre, C, Osborne, M.J, Gandhi, S, Iannuzzi, P, Larocque, R, Matte, A, Cygler, M, Gehring, K, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2003-05-12
Release date:2003-11-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The solution structure of YbcJ from Escherichia coli reveals a recently discovered alphaL motif involved in RNA binding.
J.Bacteriol., 185, 2003
1P2N
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Structural consequences of accommodation of four non-cognate amino-acid residues in the S1 pocket of bovine trypsin and chymotrypsin
Descriptor: Chymotrypsinogen A, Pancreatic trypsin inhibitor, SULFATE ION
Authors:Helland, R, Czapinska, H, Leiros, I, Olufsen, M, Otlewski, J, Smalaas, A.O.
Deposit date:2003-04-15
Release date:2004-04-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural consequences of accommodation of four non-cognate amino acid residues in the S1 pocket of bovine trypsin and chymotrypsin.
J.Mol.Biol., 333, 2003
1ONX
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Crystal structure of isoaspartyl dipeptidase from escherichia coli complexed with aspartate
Descriptor: ASPARTIC ACID, Isoaspartyl dipeptidase, ZINC ION
Authors:Thoden, J.B, Marti-Arbona, R, Raushel, F.M, Holden, H.M.
Deposit date:2003-03-02
Release date:2003-05-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High Resolution X-ray Structure of Isoaspartyl Dipeptidase from Escherichia coli
Biochemistry, 42, 2003
1P45
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Targeting tuberculosis and malaria through inhibition of enoyl reductase: compound activity and structural data
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TRICLOSAN
Authors:Kuo, M.R, Morbidoni, H.R, Alland, D, Sneddon, S.F, Gourlie, B.B, Staveski, M.M, Leonard, M, Gregory, J.S, Janjigian, A.D, Yee, C, Musser, J.M, Kreiswirth, B.N, Iwamoto, H, Perozzo, R, Jacobs Jr, W.R, Sacchettini, J.C, Fidock, D.A, TB Structural Genomics Consortium (TBSGC)
Deposit date:2003-04-21
Release date:2003-09-16
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Targeting tuberculosis and malaria through inhibition of Enoyl reductase: compound activity and structural data.
J.Biol.Chem., 278, 2003
1OOI
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Crystal structure of LUSH from Drosophila melanogaster at pH 6.5
Descriptor: odorant binding protein LUSH
Authors:Kruse, S.W, Zhao, R, Smith, D.P, Jones, D.N.M.
Deposit date:2003-03-03
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of a specific alcohol-binding site defined by the odorant binding protein LUSH from Drosophila melanogaster
Nat.Struct.Biol., 10, 2003
6ERJ
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Self-complemented FimA subunit from Salmonella enterica
Descriptor: ACETIC ACID, Type-1 fimbrial protein, a chain
Authors:Zyla, D.S, Prota, A, Capitani, G, Glockshuber, R.
Deposit date:2017-10-18
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Alternative folding to a monomer or homopolymer is a common feature of the type 1 pilus subunit FimA from enteroinvasive bacteria.
J.Biol.Chem., 294, 2019
1P8G
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The solution structure of apo CopZ from Bacillus subtilis
Descriptor: similar to mercuric transport protein
Authors:Banci, L, Bertini, I, Del Conte, R.
Deposit date:2003-05-07
Release date:2003-11-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of Apo CopZ from Bacillus subtilis: Further Analysis of the Changes Associated with the Presence of Copper
Biochemistry, 42, 2003
6E8P
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CA IX mimic Complexed with Steroidal Sulfamate Compound STX 49
Descriptor: (14beta,17beta)-estra-1(10),2,4,6,8-pentaene-3,17-diyl disulfamate, Carbonic anhydrase 2, ZINC ION
Authors:Andring, J.T, Mckenna, R.
Deposit date:2018-07-30
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:3,17 beta-Bis-sulfamoyloxy-2-methoxyestra-1,3,5(10)-triene and Nonsteroidal Sulfamate Derivatives Inhibit Carbonic Anhydrase IX: Structure-Activity Optimization for Isoform Selectivity.
J. Med. Chem., 62, 2019
1OW4
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Crystal structure of a pheromone binding protein from the cockroach Leucophaea maderae in complex with the fluorescent reporter ANS (1-anilinonaphtalene-8-sulfonic acid),
Descriptor: 8-ANILINO-1-NAPHTHALENE SULFONATE, GLYCEROL, pheromone binding protein
Authors:Lartigue, A, Gruez, A, Spinelli, S, Riviere, S, Brossut, R, Tegoni, M, Cambillau, C.
Deposit date:2003-03-28
Release date:2003-08-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:THE CRYSTAL STRUCTURE OF A COCKROACH PHEROMONE-BINDING PROTEIN SUGGESTS A NEW LIGAND BINDING AND RELEASE MECHANISM
J.Biol.Chem., 278, 2003
1OWB
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Three Dimensional Structure Analysis Of The Variant R109L NADH Complex of Type II Citrate Synthase From E. Coli
Descriptor: Citrate synthase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
Authors:Stokell, D.J, Donald, L.J, Maurus, R, Nguyen, N.T, Sadler, G, Choudhary, K, Hultin, P.G, Brayer, G.D, Duckworth, H.W.
Deposit date:2003-03-28
Release date:2004-05-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Probing the roles of key residues in the unique regulatory NADH binding site of type II citrate synthase of Escherichia coli.
J.Biol.Chem., 278, 2003
1PA4
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Solution structure of a putative ribosome-binding factor from Mycoplasma pneumoniae (MPN156)
Descriptor: Probable ribosome-binding factor A
Authors:Rubin, S.M, Pelton, J.G, Yokota, H, Kim, R, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC)
Deposit date:2003-05-13
Release date:2004-03-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a putative ribosome binding protein from Mycoplasma pneumoniae and comparison to a distant homolog.
J.STRUCT.FUNCT.GENOM., 4, 2003
1WSB
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Flavodoxin mutant- S64C
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Artali, R, Bombieri, G, Marchini, N, Meneghetti, F, Rossi, G.L, Cavazzini, D, Gilardi, G.
Deposit date:2004-11-05
Release date:2004-11-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Redox properties and crystal structures of a Desulfovibrio vulgaris flavodoxin mutant in the monomeric and homodimeric forms.
Biochim.Biophys.Acta, 1794, 2009
1OID
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5'-Nucleotidase (E. coli) with an Engineered Disulfide Bridge (S228C, P513C)
Descriptor: NICKEL (II) ION, PROTEIN USHA
Authors:Schultz-Heienbrok, R, Maier, T, Straeter, N.
Deposit date:2003-06-13
Release date:2004-06-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Trapping a 96 Degree Domain Rotation in Two Distinct Conformations by Engineered Disulfide Bridges
Protein Sci., 13, 2004
1P7A
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Solution Structure of the Third Zinc Finger from BKLF
Descriptor: Kruppel-like factor 3, ZINC ION
Authors:Simpson, R.J.Y, Cram, E.D, Czolij, R, Matthews, J.M, Crossley, M, Mackay, J.P.
Deposit date:2003-04-30
Release date:2003-12-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:CCHX zinc finger derivatives retain the ability to bind Zn(II) and mediate protein-DNA interactions.
J.Biol.Chem., 278, 2003
1WSP
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Crystal structure of axin dix domain
Descriptor: Axin 1 protein, BENZOIC ACID, MERCURY (II) ION
Authors:Shibata, N, Hanamura, T, Yamamoto, R, Ueda, Y, Yamamoto, H, Kikuchi, A, Higuchi, Y.
Deposit date:2004-11-08
Release date:2006-02-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of axin dix domain
to be published
1WUQ
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Structure of GTP cyclohydrolase I Complexed with 8-oxo-GTP
Descriptor: 8-OXO-GUANOSINE-5'-TRIPHOSPHATE, GTP cyclohydrolase I, ZINC ION
Authors:Tanaka, Y, Nakagawa, N, Masui, R, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-12-08
Release date:2005-07-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Novel reaction mechanism of GTP cyclohydrolase I. High-resolution X-ray crystallography of Thermus thermophilus HB8 enzyme complexed with a transition state analogue, the 8-oxoguanine derivative
J.Biochem.(Tokyo), 138, 2005
1P9S
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Coronavirus Main Proteinase (3CLpro) Structure: Basis for Design of anti-SARS Drugs
Descriptor: 1,4-DIETHYLENE DIOXIDE, Replicase polyprotein 1ab
Authors:Anand, K, Ziebuhr, J, Wadhwani, P, Mesters, J.R, Hilgenfeld, R.
Deposit date:2003-05-12
Release date:2003-05-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Coronavirus Main Proteinase (3CLpro) Structure: Basis for Design of anti-SARS Drugs
Science, 300, 2003

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