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PDB: 27265 results

5YIS
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BU of 5yis by Molmil
Crystal Structure of AnkB LIR/LC3B complex
Descriptor: Ankyrin-2, GLYCEROL, Microtubule-associated proteins 1A/1B light chain 3B, ...
Authors:Li, J, Zhu, R, Chen, K, Zheng, H, Yuan, C, Zhang, H, Wang, C, Zhang, M.
Deposit date:2017-10-06
Release date:2018-05-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Potent and specific Atg8-targeting autophagy inhibitory peptides from giant ankyrins.
Nat. Chem. Biol., 14, 2018
6YJ8
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BU of 6yj8 by Molmil
DarB-APO
Descriptor: ACETATE ION, CBS domain-containing protein YkuL, DI(HYDROXYETHYL)ETHER
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2020-04-02
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:DarB from B. subtilis
To Be Published
5XXT
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BU of 5xxt by Molmil
GDP-microtubule complexed with nucleotide-free KIF5C
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Morikawa, M, Shigematsu, H, Nitta, R, Hirokawa, N.
Deposit date:2017-07-05
Release date:2018-10-10
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (5.35 Å)
Cite:Kinesin-binding-triggered conformation switching of microtubules contributes to polarized transport
J. Cell Biol., 217, 2018
6YJ9
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BU of 6yj9 by Molmil
DarB in complex with 3'3'cGAMP
Descriptor: 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, CBS domain-containing protein YkuL, CHLORIDE ION
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2020-04-02
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:DarB from B. subtilis
To Be Published
5XZH
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BU of 5xzh by Molmil
Vitamin D receptor with a synthetic ligand ADRO2
Descriptor: (1R,3S,5Z)-5-[(2E)-2-[(1R,3aS,7aR)-1-[(2R,6R)-6-(1-adamantyl)-6-oxidanyl-hex-4-yn-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol, Mediator of RNA polymerase II transcription subunit 1, Vitamin D3 receptor
Authors:Otero, R, Numoto, N, Ikura, T, Yamada, S, Mourino, A, Makishima, M, Ito, N.
Deposit date:2017-07-12
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:25 S-Adamantyl-23-yne-26,27-dinor-1 alpha ,25-dihydroxyvitamin D3: Synthesis, Tissue Selective Biological Activities, and X-ray Crystal Structural Analysis of Its Vitamin D Receptor Complex.
J. Med. Chem., 61, 2018
6YJ7
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BU of 6yj7 by Molmil
DarB fom B. subtilis in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, CBS domain-containing protein YkuL, CHLORIDE ION
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2020-04-02
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:DarB from B. subtilis
To Be Published
6YJA
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BU of 6yja by Molmil
DarB fom B. subtilis in complex with c-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, CALCIUM ION, CBS domain-containing protein YkuL, ...
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2020-04-02
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:DarB from B. subtilis
To Be Published
5Y01
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BU of 5y01 by Molmil
Acid-tolerant monomeric GFP, Gamillus, non-fluorescence (OFF) state
Descriptor: Green fluorescent protein, PHOSPHATE ION
Authors:Nakashima, R, Sakurai, K, Shinoda, H, Matsuda, T, Nagai, T.
Deposit date:2017-07-14
Release date:2018-01-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Acid-Tolerant Monomeric GFP from Olindias formosa.
Cell Chem Biol, 25, 2018
7OA4
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BU of 7oa4 by Molmil
Crystal structure of the N-terminal endonuclease domain of La Crosse virus L-protein bound to compound L-742,001
Descriptor: (2Z)-4-[1-benzyl-4-(4-chlorobenzyl)piperidin-4-yl]-2-hydroxy-4-oxobut-2-enoic acid, FORMIC ACID, MANGANESE (II) ION, ...
Authors:Feracci, M, Hernandez, S, Vincentelli, R, Ferron, F, Reguera, J, Canard, B, Alvarez, K.
Deposit date:2021-04-19
Release date:2022-08-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the N-terminal endonuclease domain of La Crosse virus L-protein bound to compound L-742,001
To Be Published
4N60
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BU of 4n60 by Molmil
Crystal structure of hemagglutinin from an H7N9 influenza virus in complex with LSTc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, Hemagglutinin HA2, ...
Authors:Xu, R, Wilson, I.A.
Deposit date:2013-10-11
Release date:2013-12-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9032 Å)
Cite:Preferential recognition of avian-like receptors in human influenza A H7N9 viruses.
Science, 342, 2013
5YGG
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BU of 5ygg by Molmil
Crystal structure of Fructokinase Double-Mutant (T261C-H108C) from Vibrio cholerae O395 in fructose, ADP and potassium ion bound form
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Fructokinase, ...
Authors:Chatterjee, S, Paul, R, Nath, S, Sen, U.
Deposit date:2017-09-22
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.671 Å)
Cite:Large-scale conformational changes and redistribution of surface negative charge upon sugar binding dictate the fidelity of phosphorylation in Vibrio cholerae fructokinase.
Sci Rep, 8, 2018
5YIQ
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BU of 5yiq by Molmil
Crystal structure of AnkG LIR/LC3B complex
Descriptor: Ankyrin-3, Microtubule-associated proteins 1A/1B light chain 3B, ZINC ION
Authors:Li, J, Zhu, R, Chen, K, Zheng, H, Yuan, C, Zhang, H, Wang, C, Zhang, M.
Deposit date:2017-10-06
Release date:2018-05-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Potent and specific Atg8-targeting autophagy inhibitory peptides from giant ankyrins.
Nat. Chem. Biol., 14, 2018
5YF0
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BU of 5yf0 by Molmil
Crystal structure of CARNMT1 bound to SAM
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Cao, R, Zhang, X, Li, H.
Deposit date:2017-09-20
Release date:2018-08-01
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Molecular basis for histidine N1 position-specific methylation by CARNMT1.
Cell Res., 28, 2018
5AHJ
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BU of 5ahj by Molmil
Yeast 20S proteasome in complex with Macyranone A
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 20S PROTEASOME, CHLORIDE ION, ...
Authors:Etzbach, L, Plaza, A, Dubiella, C, Groll, M, Kaiser, M, Mueller, R.
Deposit date:2015-02-06
Release date:2015-02-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Macyranones: Structure, Biosynthesis, and Binding Mode of an Unprecedented Epoxyketone that Targets the 20S Proteasome.
J.Am.Chem.Soc., 137, 2015
6Y2R
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BU of 6y2r by Molmil
Escherichia coli R255A RnlA endoribonuclease (single alanine mutant of RnlA)
Descriptor: mRNA endoribonuclease toxin LS
Authors:Garcia-Rodriguez, G, Loris, R.
Deposit date:2020-02-17
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.89 Å)
Cite:Alternative dimerization is required for activity and inhibition of the HEPN ribonuclease RnlA.
Nucleic Acids Res., 49, 2021
5YIR
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BU of 5yir by Molmil
Crystal Structure of AnkB LIR/GABARAP complex
Descriptor: Ankyrin-2, Gamma-aminobutyric acid receptor-associated protein, NICKEL (II) ION
Authors:Li, J, Zhu, R, Chen, K, Zheng, H, Yuan, C, Zhang, H, Wang, C, Zhang, M.
Deposit date:2017-10-06
Release date:2018-05-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Potent and specific Atg8-targeting autophagy inhibitory peptides from giant ankyrins.
Nat. Chem. Biol., 14, 2018
2OQW
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BU of 2oqw by Molmil
The crystal structure of sortase B from B.anthracis in complex with AAEK1
Descriptor: Sortase B
Authors:Wu, R, Zhang, R, Marresso, A.W, Schneewind, O, Joachimiak, A.
Deposit date:2007-02-01
Release date:2007-06-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Activation of inhibitors by sortase triggers irreversible modification of the active site.
J.Biol.Chem., 282, 2007
2OQZ
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BU of 2oqz by Molmil
The crystal structure of sortase B from B.anthracis in complex with AAEK2
Descriptor: ACETIC ACID, Sortase B
Authors:Wu, R, Zhang, R, Maresso, A.W, Schneewind, O, Joachimiak, A.
Deposit date:2007-02-01
Release date:2007-06-19
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Activation of inhibitors by sortase triggers irreversible modification of the active site.
J.Biol.Chem., 282, 2007
5AGU
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BU of 5agu by Molmil
The sliding clamp of Mycobacterium tuberculosis in complex with a natural product.
Descriptor: (R,R)-2,3-BUTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA POLYMERASE III SUBUNIT BETA, ...
Authors:Lukat, P, Kling, A, Heinz, D.W, Mueller, R.
Deposit date:2015-02-03
Release date:2015-06-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.173 Å)
Cite:Antibiotics. Targeting Dnan for Tuberculosis Therapy Using Novel Griselimycins.
Science, 348, 2015
6YA9
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BU of 6ya9 by Molmil
Crystal structure of rsGCaMP in the ON state (non-illuminated)
Descriptor: CALCIUM ION, rsCGaMP
Authors:Janowski, R, Fuenzalida-Werner, J.P, Mishra, K, Stiel, A.C, Niessing, D.
Deposit date:2020-03-11
Release date:2021-10-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Genetically encoded photo-switchable molecular sensors for optoacoustic and super-resolution imaging.
Nat.Biotechnol., 2021
5YQA
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BU of 5yqa by Molmil
The crystal structure of CYP199A4 binding with 4-n-Propyl benzoic acid
Descriptor: 4-propylbenzoic acid, CHLORIDE ION, Cytochrome P450, ...
Authors:Zhou, W, Zhang, T, Qiao, R, Bell, S, Coleman, T.
Deposit date:2017-11-06
Release date:2019-02-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:The crystal structure of CYP199A4 binding with 4-n-Propyl benzoic acid
To Be Published
2C0Y
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BU of 2c0y by Molmil
THE CRYSTAL STRUCTURE OF A CYS25ALA MUTANT OF HUMAN PROCATHEPSIN S
Descriptor: PROCATHEPSIN S
Authors:Kaulmann, G, Palm, G.J, Schilling, K, Hilgenfeld, R, Wiederanders, B.
Deposit date:2005-09-08
Release date:2006-11-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Crystal Structure of a Cys25 -> Ala Mutant of Human Procathepsin S Elucidates Enzyme-Prosequence Interactions.
Protein Sci., 15, 2006
5YT0
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BU of 5yt0 by Molmil
Crystal structure of the complex of archaeal ribosomal stalk protein aP1 and archaeal translation initiation factor aIF5B
Descriptor: Archaeal ribosomal stalk protein aP1, GUANOSINE-5'-DIPHOSPHATE, Probable translation initiation factor IF-2
Authors:Murakami, R, Singh, C.R, Morris, J, Tang, L, Harmon, I, Miyoshi, T, Ito, K, Asano, K, Uchiumi, T.
Deposit date:2017-11-16
Release date:2018-06-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The Interaction between the Ribosomal Stalk Proteins and Translation Initiation Factor 5B Promotes Translation Initiation
Mol. Cell. Biol., 38, 2018
7TOK
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BU of 7tok by Molmil
Crystal structure of the CBM domain of carbohydrate esterase FjoAcXE
Descriptor: Acetylxylan esterase I
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Jurak, E, Master, E.
Deposit date:2022-01-24
Release date:2022-04-13
Last modified:2022-11-02
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Elucidating Sequence and Structural Determinants of Carbohydrate Esterases for Complete Deacetylation of Substituted Xylans.
Molecules, 27, 2022
4N62
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BU of 4n62 by Molmil
Crystal structure of hemagglutinin from an H7N9 influenza virus in complex with a sulfated receptor analog
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, Hemagglutinin HA2, ...
Authors:Xu, R, Wilson, I.A.
Deposit date:2013-10-11
Release date:2013-12-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5026 Å)
Cite:Preferential recognition of avian-like receptors in human influenza A H7N9 viruses.
Science, 342, 2013

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