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PDB: 67 件
5M4W
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BU of 5m4w by Molmil
Structure of DNA AGCGA-quadruplex adopted by 15-mer oligonucleotide found in regulatory region of the PLEKHG3 human gene with G11 to I11 mutation, d(GCGAGGGAGCIAGGG),VK34_I11
分子名称: DNA (5'-D(*GP*CP*GP*AP*GP*GP*GP*AP*GP*CP*IP*AP*GP*GP*G)-3')
著者Kocman, V, Plavec, J.
登録日2016-10-19
公開日2017-05-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Tetrahelical structural family adopted by AGCGA-rich regulatory DNA regions.
Nat Commun, 8, 2017
5LKN
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BU of 5lkn by Molmil
NMR solution structure of human FNIII domain 2 of NCAM
分子名称: Neural cell adhesion molecule 1
著者Slapsak, U, Salzano, G, Amin, L, Abskharon, R.N.N, Ilc, G, Zupancic, B, Biljan, I, Plavec, J, Giachin, G, Legname, G.
登録日2016-07-22
公開日2016-09-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献The N Terminus of the Prion Protein Mediates Functional Interactions with the Neuronal Cell Adhesion Molecule (NCAM) Fibronectin Domain.
J.Biol.Chem., 291, 2016
5O4D
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BU of 5o4d by Molmil
G-quadruplex of Human papillomavirus type 52
分子名称: DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*CP*AP*GP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*T)-3')
著者Marusic, M, Plavec, J.
登録日2017-05-29
公開日2018-06-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Towards Understanding of Polymorphism of the G-rich Region of Human Papillomavirus Type 52.
Molecules, 24, 2019
5NYU
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M2 G-quadruplex 10 wt% PEG8000
分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*AP*CP*GP*GP*GP*CP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3')
著者Trajkovski, M, Plavec, J, Endoh, T, Tateishi-Karimata, H, Sugimoto, N.
登録日2017-05-11
公開日2018-04-11
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations.
Nucleic Acids Res., 46, 2018
2M53
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G-rich VEGF aptamer with LNA modifications
分子名称: G-rich VEGF aptamer
著者Marusic, M, Veedu, R.N, Plavec, J.
登録日2013-02-13
公開日2013-08-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献G-rich VEGF aptamer with locked and unlocked nucleic acid modifications exhibits a unique G-quadruplex fold.
Nucleic Acids Res., 41, 2013
2LFT
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BU of 2lft by Molmil
Human prion protein with E219K protective polymorphism
分子名称: Major prion protein
著者Biljan, I, Ilc, G, Giacin, G, Zhukov, I, Plavec, J, Legname, G.
登録日2011-07-14
公開日2012-06-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural basis for the protective effect of the human prion protein carrying the dominant-negative E219K polymorphism.
Biochem.J., 446, 2012
2LSB
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BU of 2lsb by Molmil
Solution-state NMR structure of the human prion protein
分子名称: Major prion protein
著者Biljan, I, Ilc, G, Giancin, G, Zhukov, I, Plavec, J, Legname, G.
登録日2012-04-26
公開日2012-06-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural basis for the protective effect of the human prion protein carrying the dominant-negative E219K polymorphism.
Biochem.J., 446, 2012
2LOD
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Solution-state structure of an intramolecular G-quadruplex with propeller, diagonal and edgewise loops
分子名称: DNA (5'-D(*GP*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*GP*AP*CP*GP*GP*G)-3')
著者Marusic, M, Sket, P, Bauer, L, Viglasky, V, Plavec, J.
登録日2012-01-23
公開日2012-05-30
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution-state structure of an intramolecular G-quadruplex with propeller, diagonal and edgewise loops.
Nucleic Acids Res., 40, 2012
2LED
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Unique structural features of interconverting monomeric and dimeric G-quadruplexes adopted by a sequence from intron of N-myc gene
分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*CP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*A)-3')
著者Trajkovski, M, Plavec, J, Webba da Silva, M.
登録日2011-06-15
公開日2012-03-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Unique Structural Features of Interconverting Monomeric and Dimeric G-Quadruplexes Adopted by a Sequence from the Intron of the N-myc Gene.
J.Am.Chem.Soc., 134, 2012
2MJJ
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A tetrahelical DNA fold adopted by alternating GGG and GCG tracts
分子名称: 5'-D(*GP*GP*GP*AP*GP*CP*GP*AP*GP*GP*GP*AP*GP*CP*G)-3'
著者Kocman, V, Plavec, J.
登録日2014-01-10
公開日2014-12-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A tetrahelical DNA fold adopted by tandem repeats of alternating GGG and GCG tracts.
Nat Commun, 5, 2014
2MAE
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Transmembrane-cytosolic part of Trop2 explored by NMR and Molecular Dynamics
分子名称: Tumor-associated calcium signal transducer 2
著者Vidmar, T, Pavi, M, Ilc, G, Plavec, J, Lenari, B.
登録日2013-07-08
公開日2014-07-09
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Transmembrane-cytosolic part of Trop2 explored by NMR and Molecular Dynamics
To be Published
2LV1
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Solution-state NMR structure of prion protein mutant V210I at neutral pH
分子名称: Major prion protein
著者Biljan, I, Ilc, G, Giachin, G, Legname, G, Plavec, J.
登録日2012-06-26
公開日2012-09-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural Rearrangements at Physiological pH: Nuclear Magnetic Resonance Insights from the V210I Human Prion Protein Mutant.
Biochemistry, 51, 2012
2MVL
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BU of 2mvl by Molmil
Solution structure of cytosolic part of Trop2
分子名称: Tumor-associated calcium signal transducer 2
著者Ilc, G, Plavec, J, Vidmar, T, Pavsic, M, Lenarcic, B.
登録日2014-10-08
公開日2015-05-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The cytosolic tail of the tumor marker protein Trop2--a structural switch triggered by phosphorylation.
Sci Rep, 5, 2015
2N8Z
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Apo form of Calmodulin-Like Domain of Human Non-Muscle alpha-actinin 1
分子名称: Alpha-actinin-1
著者Drmota Prebil, S, Slapsak, U, de Almeida Ribeiro, E, Pavsic, M, Ilc, G, Zielinska, K, Hartl, M, Backman, L, Plavec, J, Lenarcic, B, Djinovic-Carugo, K.
登録日2015-10-28
公開日2016-06-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and calcium-binding studies of calmodulin-like domain of human non-muscle alpha-actinin-1.
Sci Rep, 6, 2016
2MVK
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Solution structure of phosphorylated cytosolic part of Trop2
分子名称: Tumor-associated calcium signal transducer 2
著者Ilc, G, Plavec, J, Vidmar, T, Pavsic, M, Lenarcic, B.
登録日2014-10-08
公開日2015-05-06
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献The cytosolic tail of the tumor marker protein Trop2--a structural switch triggered by phosphorylation.
Sci Rep, 5, 2015
2N8Y
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Holo form of Calmodulin-Like Domain of Human Non-Muscle alpha-actinin 1
分子名称: Alpha-actinin-1, CALCIUM ION
著者Drmota Prebil, S, Slapsak, U, de Almeida Ribeiro, E, Pavsic, M, Ilc, G, Zielinska, K, Hartl, M, Backman, L, Plavec, J, Lenarcic, B, Djinovic-Carugo, K.
登録日2015-10-28
公開日2016-06-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and calcium-binding studies of calmodulin-like domain of human non-muscle alpha-actinin-1.
Sci Rep, 6, 2016
2M39
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The solution structure of 3',5'-LINKED 2'-O-(2-METHOXYETHYL)-RNA DUPLEX
分子名称: RNA (5'-R(*(C5L)P*(G48)P*(C5L)P*(G48)P*(A44)P*(A44)P*(T39)P*(T39)P*(C5L)P*(G48)P*(C5L)P*DG)-3')
著者Plevnik, M, Cevec, M, Plavec, J.
登録日2013-01-15
公開日2013-11-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structure of 2'-O-(2-methoxyethyl) modified and C5-methylated RNA dodecamer duplex.
Biochimie, 95, 2013
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