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PDB: 218 results

2DEA
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BU of 2dea by Molmil
Crystal Structure of the Aminopeptidase of Aeromonas proteolytica at pH 4.7
Descriptor: Bacterial leucyl aminopeptidase, SODIUM ION, ZINC ION
Authors:Petsko, G.A, Ringe, D, Desmarais, W.
Deposit date:2006-02-10
Release date:2006-07-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:The high-resolution structures of the neutral and the low pH crystals of aminopeptidase from Aeromonas proteolytica.
J.Biol.Inorg.Chem., 11, 2006
4GCH
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BU of 4gch by Molmil
STRUCTURE AND ACTIVITY OF TWO PHOTOREVERSIBLE CINNAMATES BOUND TO CHYMOTRYPSIN
Descriptor: 3-(4-DIETHYLAMINO-2-HYDROXY-PHENYL)-2-METHYL-PROPIONIC ACID, GAMMA-CHYMOTRYPSIN A
Authors:Stoddard, B.L, Ringe, D, Petsko, G.A.
Deposit date:1989-09-25
Release date:1990-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and activity of two photoreversible cinnamates bound to chymotrypsin.
Biochemistry, 29, 1990
3YPI
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BU of 3ypi by Molmil
ELECTROPHILIC CATALYSIS IN TRIOSEPHOSPHASE ISOMERASE: THE ROLE OF HISTIDINE-95
Descriptor: PHOSPHOGLYCOLOHYDROXAMIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:Lolis, E, Petsko, G.A.
Deposit date:1990-12-31
Release date:1993-04-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Electrophilic catalysis in triosephosphate isomerase: the role of histidine-95.
Biochemistry, 30, 1991
3VGN
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BU of 3vgn by Molmil
Crystal Structure of Ketosteroid Isomerase D40N from Pseudomonas putida (pKSI) with bound 3-fluoro-4-nitrophenol
Descriptor: 3-fluoro-4-nitrophenol, Steroid Delta-isomerase
Authors:Caaveiro, J.M.M, Pybus, B, Ringe, D, Petsko, G.A, Sigala, P.A.
Deposit date:2011-08-16
Release date:2012-08-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Quantitative dissection of hydrogen bond-mediated proton transfer in the ketosteroid isomerase active site
Proc.Natl.Acad.Sci.USA, 110, 2013
6RAT
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BU of 6rat by Molmil
EFFECTS OF TEMPERATURE ON PROTEIN STRUCTURE AND DYNAMICS: X-RAY CRYSTALLOGRAPHIC STUDIES OF THE PROTEIN RIBONUCLEASE-A AT NINE DIFFERENT TEMPERATURES FROM 98 TO 320 K
Descriptor: RIBONUCLEASE A
Authors:Tilton Jr, R.F, Dewan, J.C, Petsko, G.A, Burley, S.K.
Deposit date:1991-08-13
Release date:1993-07-15
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Effects of temperature on protein structure and dynamics: X-ray crystallographic studies of the protein ribonuclease-A at nine different temperatures from 98 to 320 K.
Biochemistry, 31, 1992
3LZ2
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BU of 3lz2 by Molmil
STRUCTURE DETERMINATION OF TURKEY EGG WHITE LYSOZYME USING LAUE DIFFRACTION
Descriptor: TURKEY EGG WHITE LYSOZYME
Authors:Howell, P.L, Almo, S.C, Parsons, M.R, Hajdu, J, Petsko, G.A.
Deposit date:1991-09-13
Release date:1993-10-31
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure determination of turkey egg-white lysozyme using Laue diffraction data.
Acta Crystallogr.,Sect.B, 48, 1992
2RGX
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BU of 2rgx by Molmil
Crystal Structure of Adenylate Kinase from Aquifex Aeolicus in complex with Ap5A
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION
Authors:Thai, V, Wolf-Watz, M, Fenn, T, Pozharski, E, Wilson, M.A, Petsko, G.A, Kern, D.
Deposit date:2007-10-05
Release date:2007-12-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Intrinsic motions along an enzymatic reaction trajectory.
Nature, 450, 2007
2RH5
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BU of 2rh5 by Molmil
Structure of Apo Adenylate Kinase from Aquifex Aeolicus
Descriptor: Adenylate kinase
Authors:Thai, V, Wolf-Watz, M, Fenn, T, Pozharski, E, Wilson, M.A, Petsko, G.A, Kern, D.
Deposit date:2007-10-05
Release date:2007-12-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Intrinsic motions along an enzymatic reaction trajectory.
Nature, 450, 2007
2FOC
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BU of 2foc by Molmil
Structure of porcine pancreatic elastase in 55% dimethylformamide
Descriptor: CALCIUM ION, DIMETHYLFORMAMIDE, SULFATE ION, ...
Authors:Mattos, C, Bellamacina, C.R, Peisach, E, Pereira, A, Vitkup, D, Petsko, G.A, Ringe, D.
Deposit date:2006-01-13
Release date:2006-04-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Multiple solvent crystal structures: Probing binding sites, plasticity and hydration
J.Mol.Biol., 357, 2006
1MRA
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BU of 1mra by Molmil
MANDELATE RACEMASE MUTANT D270N CO-CRYSTALLIZED WITH (S)-ATROLACTATE
Descriptor: ATROLACTIC ACID (2-PHENYL-LACTIC ACID), MAGNESIUM ION, MANDELATE RACEMASE
Authors:Clifton, J.G, Petsko, G.A.
Deposit date:1996-03-12
Release date:1996-08-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of the reaction catalyzed by mandelate racemase: structure and mechanistic properties of the D270N mutant.
Biochemistry, 35, 1996
6FAB
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BU of 6fab by Molmil
THREE-DIMENSIONAL STRUCTURE OF MURINE ANTI-P-AZOPHENYLARSONATE FAB 36-71. 1. X-RAY CRYSTALLOGRAPHY, SITE-DIRECTED MUTAGENESIS, AND MODELING OF THE COMPLEX WITH HAPTEN
Descriptor: IGG1-KAPPA 36-71 FAB (HEAVY CHAIN), IGG1-KAPPA 36-71 FAB (LIGHT CHAIN)
Authors:Strong, R.K, Rose, D.R, Petsko, G.A, Sharon, J, Margolies, M.N.
Deposit date:1991-01-17
Release date:1993-01-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Three-dimensional structure of murine anti-p-azophenylarsonate Fab 36-71. 1. X-ray crystallography, site-directed mutagenesis, and modeling of the complex with hapten.
Biochemistry, 30, 1991
1ELA
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BU of 1ela by Molmil
Analogous inhibitors of elastase do not always bind analogously
Descriptor: 6-ammonio-N-(trifluoroacetyl)-L-norleucyl-N-[4-(1-methylethyl)phenyl]-L-prolinamide, ACETIC ACID, CALCIUM ION, ...
Authors:Mattos, C, Rasmussen, B, Ding, X, Petsko, G.A, Ringe, D.
Deposit date:1993-12-07
Release date:1994-04-30
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Analogous inhibitors of elastase do not always bind analogously.
Nat.Struct.Biol., 1, 1994
2GYI
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BU of 2gyi by Molmil
DESIGN, SYNTHESIS, AND CHARACTERIZATION OF A POTENT XYLOSE ISOMERASE INHIBITOR, D-THREONOHYDROXAMIC ACID, AND HIGH-RESOLUTION X-RAY CRYSTALLOGRAPHIC STRUCTURE OF THE ENZYME-INHIBITOR COMPLEX
Descriptor: 2,3,4,N-TETRAHYDROXY-BUTYRIMIDIC ACID, MAGNESIUM ION, XYLOSE ISOMERASE
Authors:Allen, K.N, Lavie, A, Petsko, G.A, Ringe, D.
Deposit date:1994-09-01
Release date:1995-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Design, Synthesis, and Characterization of a Potent Xylose Isomerase Inhibitor, D-Threonohydroxamic Acid, and High-Resolution X-Ray Crystallographic Structure of the Enzyme-Inhibitor Complex
Biochemistry, 34, 1995
5GCH
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BU of 5gch by Molmil
CHEMISTRY OF CAGED ENZYMES /II$. PHOTOACTIVATION OF INHIBITED CHYMOTRYPSIN
Descriptor: GAMMA-CHYMOTRYPSIN A
Authors:Stoddard, B.L, Ringe, D, Petsko, G.A.
Deposit date:1989-09-25
Release date:1990-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Photolysis and deacylation of inhibited chymotrypsin.
Biochemistry, 29, 1990
9RAT
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BU of 9rat by Molmil
EFFECTS OF TEMPERATURE ON PROTEIN STRUCTURE AND DYNAMICS: X-RAY CRYSTALLOGRAPHIC STUDIES OF THE PROTEIN RIBONUCLEASE-A AT NINE DIFFERENT TEMPERATURES FROM 98 TO 320 K
Descriptor: RIBONUCLEASE A
Authors:Tilton Jr, R.F, Dewan, J.C, Petsko, G.A, Gilbert, W.
Deposit date:1991-08-13
Release date:1993-07-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Effects of temperature on protein structure and dynamics: X-ray crystallographic studies of the protein ribonuclease-A at nine different temperatures from 98 to 320 K.
Biochemistry, 31, 1992
6RHN
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BU of 6rhn by Molmil
HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN (HINT) FROM RABBIT WITHOUT NUCLEOTIDE
Descriptor: HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN
Authors:Brenner, C, Garrison, P, Gilmour, J, Peisach, D, Ringe, D, Petsko, G.A, Lowenstein, J.M.
Deposit date:1997-02-27
Release date:1997-06-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of HINT demonstrate that histidine triad proteins are GalT-related nucleotide-binding proteins.
Nat.Struct.Biol., 4, 1997
7RPP
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BU of 7rpp by Molmil
Crystal structure of human CEACAM1 with GFCC' and ABED face
Descriptor: 1,2-ETHANEDIOL, Carcinoembryonic antigen-related cell adhesion molecule 1
Authors:Gandhi, A.K, Kim, W.M, Sun, Z.-Y, Huang, Y.H, Petsko, G.A, Blumberg, R.S.
Deposit date:2021-08-04
Release date:2022-08-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of human CEACAM1 oligomerization.
Commun Biol, 5, 2022
7RAT
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BU of 7rat by Molmil
EFFECTS OF TEMPERATURE ON PROTEIN STRUCTURE AND DYNAMICS: X-RAY CRYSTALLOGRAPHIC STUDIES OF THE PROTEIN RIBONUCLEASE-A AT NINE DIFFERENT TEMPERATURES FROM 98 TO 320 K
Descriptor: RIBONUCLEASE A
Authors:Tiltonjunior, R.F, Dewan, J.C, Petsko, G.A, Gilbert, W.
Deposit date:1991-08-13
Release date:1993-07-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Effects of temperature on protein structure and dynamics: X-ray crystallographic studies of the protein ribonuclease-A at nine different temperatures from 98 to 320 K.
Biochemistry, 31, 1992
1MBC
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BU of 1mbc by Molmil
X-RAY STRUCTURE AND REFINEMENT OF CARBON-MONOXY (FE II)-MYOGLOBIN AT 1.5 ANGSTROMS RESOLUTION
Descriptor: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kuriyan, J, Petsko, G.A.
Deposit date:1988-09-15
Release date:1989-01-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:X-ray structure and refinement of carbon-monoxy (Fe II)-myoglobin at 1.5 A resolution.
J.Mol.Biol., 192, 1986
5I8S
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BU of 5i8s by Molmil
Structure of Mouse Acireductone dioxygenase with Ni2+ ion and pentanoic acid in the active site
Descriptor: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, NICKEL (II) ION, PENTANOIC ACID
Authors:Deshpande, A.R, Wagenpfeil, K, Pochapsky, T.C, Petsko, G.A, Ringe, D.
Deposit date:2016-02-19
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Metal-Dependent Function of a Mammalian Acireductone Dioxygenase.
Biochemistry, 55, 2016
4PTH
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BU of 4pth by Molmil
Ensemble model for Escherichia coli dihydrofolate reductase at 100K
Descriptor: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
Authors:Keedy, D.A, van den Bedem, H, Sivak, D.A, Petsko, G.A, Ringe, D, Wilson, M.A, Fraser, J.S.
Deposit date:2014-03-10
Release date:2014-05-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Crystal Cryocooling Distorts Conformational Heterogeneity in a Model Michaelis Complex of DHFR.
Structure, 22, 2014
4PST
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BU of 4pst by Molmil
Multiconformer model for Escherichia coli dihydrofolate reductase at 277 K
Descriptor: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
Authors:Keedy, D.A, van den Bedem, H, Sivak, D.A, Petsko, G.A, Ringe, D, Wilson, M.A, Fraser, J.S.
Deposit date:2014-03-07
Release date:2014-06-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Crystal Cryocooling Distorts Conformational Heterogeneity in a Model Michaelis Complex of DHFR.
Structure, 22, 2014
4PSS
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BU of 4pss by Molmil
Multiconformer model for Escherichia coli dihydrofolate reductase at 100K
Descriptor: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
Authors:Keedy, D.A, van den Bedem, H, Sivak, D.A, Petsko, G.A, Ringe, D, Wilson, M.A, Fraser, J.S.
Deposit date:2014-03-07
Release date:2014-06-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.849 Å)
Cite:Crystal Cryocooling Distorts Conformational Heterogeneity in a Model Michaelis Complex of DHFR.
Structure, 22, 2014
4PTJ
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BU of 4ptj by Molmil
Ensemble model for Escherichia coli dihydrofolate reductase at 277K
Descriptor: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
Authors:Keedy, D.A, van den Bedem, H, Sivak, D.A, Petsko, G.A, Ringe, D, Wilson, M.A, Fraser, J.S.
Deposit date:2014-03-10
Release date:2014-05-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Crystal Cryocooling Distorts Conformational Heterogeneity in a Model Michaelis Complex of DHFR.
Structure, 22, 2014
5I8T
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BU of 5i8t by Molmil
Structure of Mouse Acireductone dioxygenase with Ni2+ ion and D-lactic acid in the active site
Descriptor: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, ISOPROPYL ALCOHOL, LACTIC ACID, ...
Authors:Deshpande, A.R, Wagenpfeil, K, Pochapsky, T.C, Petsko, G.A, Ringe, D.
Deposit date:2016-02-19
Release date:2016-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Metal-Dependent Function of a Mammalian Acireductone Dioxygenase.
Biochemistry, 55, 2016

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