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PDB: 198 results

8FEK
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BU of 8fek by Molmil
Crystal structure of PBP cyclase Ulm16
Descriptor: PBP cyclase Ulm16
Authors:Patel, R, Budimir, Z, Parkinson, E, Das, C.
Deposit date:2022-12-06
Release date:2023-11-08
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.058 Å)
Cite:Biocatalytic cyclization of small macrolactams by a penicillin-binding protein-type thioesterase.
Nat.Chem.Biol., 20, 2024
5U6I
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BU of 5u6i by Molmil
Discovery of MLi-2, an Orally Available and Selective LRRK2 Inhibitor that Reduces Brain Kinase Activity
Descriptor: 3-[2-(morpholin-4-yl)pyridin-4-yl]-5-[(propan-2-yl)oxy]-1H-indazole, Mitogen-activated protein kinase 1, SULFATE ION
Authors:Scott, J.D, DeMong, D.E, Fell, M.J, Mirescu, C, Basu, K, Greshock, T.J, Morrow, J.A, Xiao, L, Hruza, A, Harris, J, Tiscia, H.E, Chang, R.K, Embrey, M.W, McCauley, J.A, Li, W, Lin, S, Liu, H, Dai, X, Baptista, M, Agnihotri, G, Columbus, J, Mei, H, Poirier, M, Zhou, X, Lin, Y, Yin, Z, Sanders, J.M, Drolet, R.E, Kern, J.T, Kennedy, M.E, Parker, E.M, Stamford, A.W, Nargund, R, Miller, M.W.
Deposit date:2016-12-08
Release date:2017-03-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Discovery of a 3-(4-Pyrimidinyl) Indazole (MLi-2), an Orally Available and Selective Leucine-Rich Repeat Kinase 2 (LRRK2) Inhibitor that Reduces Brain Kinase Activity.
J. Med. Chem., 60, 2017
6PBJ
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BU of 6pbj by Molmil
The structure of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase with Gly190Pro mutation
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
Authors:Jiao, W, Fan, Y, Blackmore, N.J, Parker, E.J.
Deposit date:2019-06-13
Release date:2020-04-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A single amino acid substitution uncouples catalysis and allostery in an essential biosynthetic enzyme in Mycobacterium tuberculosis .
J.Biol.Chem., 295, 2020
3PG9
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BU of 3pg9 by Molmil
Thermotoga maritima DAH7P synthase in complex with inhibitor
Descriptor: AZIDE ION, CHLORIDE ION, NITRATE ION, ...
Authors:Cross, P.J, Dobson, R.C.J, Patchett, M.L, Parker, E.J.
Deposit date:2010-10-31
Release date:2011-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Tyrosine latching of a regulatory gate affords allosteric control of aromatic amino acid biosynthesis
J.Biol.Chem., 286, 2011
5UBG
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BU of 5ubg by Molmil
Catalytic core domain of Adenosine triphosphate phosphoribosyltransferase from Campylobacter jejuni with bound Phosphoribosyl-ATP
Descriptor: ATP phosphoribosyltransferase, CHLORIDE ION, PHOSPHORIBOSYL ATP, ...
Authors:Mittelstaedt, G, Jiao, W, Livingstone, E.K, Parker, E.J.
Deposit date:2016-12-20
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A dimeric catalytic core relates the short and long forms of ATP-phosphoribosyltransferase.
Biochem. J., 475, 2018
5UBI
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BU of 5ubi by Molmil
Catalytic core domain of Adenosine triphosphate phosphoribosyltransferase from Campylobacter jejuni with bound PRPP
Descriptor: 1,2-ETHANEDIOL, 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, ACETATE ION, ...
Authors:Mittelstaedt, G, Jiao, W, Livingstone, E.K, Parker, E.J.
Deposit date:2016-12-20
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:A dimeric catalytic core relates the short and long forms of ATP-phosphoribosyltransferase.
Biochem. J., 475, 2018
5UBH
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BU of 5ubh by Molmil
Catalytic core domain of Adenosine triphosphate phosphoribosyltransferase from Campylobacter jejuni with bound ATP
Descriptor: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, ATP phosphoribosyltransferase, ...
Authors:Mittelstaedt, G, Jiao, W, Livingstone, E.K, Parker, E.J.
Deposit date:2016-12-20
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:A dimeric catalytic core relates the short and long forms of ATP-phosphoribosyltransferase.
Biochem. J., 475, 2018
1ZCO
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BU of 1zco by Molmil
Crystal structure of pyrococcus furiosus 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
Descriptor: 2-dehydro-3-deoxyphosphoheptonate aldolase, CHLORIDE ION, MANGANESE (II) ION, ...
Authors:Schofield, L.R, Anderson, B.F, Patchett, M.L, Norris, G.E, Jameson, G.B, Parker, E.J.
Deposit date:2005-04-12
Release date:2005-10-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Substrate Ambiguity and Crystal Structure of Pyrococcus furiosus 3-Deoxy-d-arabino-heptulosonate-7-phosphate Synthase: An Ancestral 3-Deoxyald-2-ulosonate-phosphate Synthase?(,)
Biochemistry, 44, 2005
5UB9
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BU of 5ub9 by Molmil
Catalytic core domain of Adenosine triphosphate phosphoribosyltransferase from Campylobacter jejuni
Descriptor: ACETATE ION, ATP phosphoribosyltransferase, CHLORIDE ION, ...
Authors:Mittelstaedt, G, Jiao, W, Livingstone, E.K, Parker, E.J.
Deposit date:2016-12-20
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A dimeric catalytic core relates the short and long forms of ATP-phosphoribosyltransferase.
Biochem. J., 475, 2018
2QKF
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BU of 2qkf by Molmil
Crystal structure of 3-deoxy-d-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis
Descriptor: 3-deoxy-D-manno-octulosonic acid 8- phosphate synthetase, CHLORIDE ION, GLYCEROL, ...
Authors:Cochrane, F.C, Patchett, M.L, Jameson, G.B, Parker, E.J.
Deposit date:2007-07-11
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Re-Establishing a Metal-Binding Scaffold with Full Activity in the Metal-Independent Kdo8P Synthase from Neisseria Meningitidis
To be Published
3PFP
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BU of 3pfp by Molmil
Structure of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase from Mycobacterium tuberculosis in complex with an active site inhibitor
Descriptor: (2R)-2,7-bis(phosphonooxy)heptanoic acid, (2S)-2,7-bis(phosphonooxy)heptanoic acid, CHLORIDE ION, ...
Authors:Reichau, S, Jiao, W, Walker, S.R, Hutton, R.D, Parker, E.J, Baker, E.N.
Deposit date:2010-10-28
Release date:2011-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Potent inhibitors of a shikimate pathway enzyme from Mycobacterium tuberculosis: combining mechanism- and modeling-based design
J.Biol.Chem., 286, 2011
4C1K
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BU of 4c1k by Molmil
Crystal structure of pyrococcus furiosus 3-deoxy-D-arabino- heptulosonate 7-phosphate synthase
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOHEPTONATE ALDOLASE, CADMIUM ION, CARBONATE ION, ...
Authors:Nazmi, A.R, Schofield, L.R, Dobson, R.C.J, Jameson, G.B, Parker, E.J.
Deposit date:2013-08-13
Release date:2013-11-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Destabilization of the Homotetrameric Assembly of 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase from the Hyperthermophile Pyrococcus Furiosus Enhances Enzymatic Activity
J.Mol.Biol., 426, 2014
5UXO
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BU of 5uxo by Molmil
Type II DAH7PS from Pseudomonas aeruginosa
Descriptor: ACETATE ION, CHLORIDE ION, COBALT (II) ION, ...
Authors:Sterritt, O.W, Jameson, G.B, Parker, E.J.
Deposit date:2017-02-23
Release date:2018-02-28
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A Pseudoisostructural Type II DAH7PS Enzyme from Pseudomonas aeruginosa: Alternative Evolutionary Strategies to Control Shikimate Pathway Flux.
Biochemistry, 57, 2018
4HSO
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BU of 4hso by Molmil
Crystal structure of S213G variant DAH7PS from Neisseria meningitidis
Descriptor: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, MANGANESE (II) ION, PHOSPHOENOLPYRUVATE, ...
Authors:Cross, P.J, Pietersma, A.L, Allison, T.M, Wilson-Coutts, S.M, Cochrane, F.C, Parker, E.J.
Deposit date:2012-10-30
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Neisseria meningitidis expresses a single 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase that is inhibited primarily by phenylalanine.
Protein Sci., 22, 2013
4HSN
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BU of 4hsn by Molmil
Crystal structure of DAH7PS from Neisseria meningitidis
Descriptor: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, MANGANESE (II) ION, PHOSPHOENOLPYRUVATE, ...
Authors:Cross, P.J, Pietersma, A.L, Allison, T.M, Wilson-Coutts, S.M, Cochrane, F.C, Parker, E.J.
Deposit date:2012-10-30
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Neisseria meningitidis expresses a single 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase that is inhibited primarily by phenylalanine.
Protein Sci., 22, 2013
4IPI
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BU of 4ipi by Molmil
Crystal Structure of R314A N-acetyl Neuraminic Acid Synthase from Neiserria meningitidis with Malate bound
Descriptor: (2S)-2-hydroxybutanedioic acid, MANGANESE (II) ION, Polysialic acid capsule biosynthesis protein SiaC
Authors:Joseph, D.D.A, Jiao, W, Parker, E.J.
Deposit date:2013-01-09
Release date:2013-04-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Arg314 Is Essential for Catalysis by N-Acetyl Neuraminic Acid Synthase from Neisseria meningitidis.
Biochemistry, 52, 2013
3ZOK
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BU of 3zok by Molmil
Structure of 3-Dehydroquinate Synthase from Actinidia chinensis in complex with NAD
Descriptor: 3-DEHYDROQUINATE SYNTHASE, DI(HYDROXYETHYL)ETHER, GLYCINE, ...
Authors:Mittelstaedt, G, Negron, L, Schofield, L.R, Marsh, K, Parker, E.J.
Deposit date:2013-02-22
Release date:2013-08-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Biochemical and structural characterisation of dehydroquinate synthase from the New Zealand kiwifruit Actinidia chinensis.
Arch. Biochem. Biophys., 537, 2013
5U99
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BU of 5u99 by Molmil
Transition state analysis of adenosine triphosphate phosphoribosyltransferase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP phosphoribosyltransferase, MAGNESIUM ION, ...
Authors:Moggre, G.-J, Poulin, M.B, Tyler, P.C, Schramm, V.L, Parker, E.J.
Deposit date:2016-12-15
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Transition State Analysis of Adenosine Triphosphate Phosphoribosyltransferase.
ACS Chem. Biol., 12, 2017
4GRS
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BU of 4grs by Molmil
Crystal structure of a chimeric DAH7PS
Descriptor: Phospho-2-dehydro-3-deoxyheptonate aldolase, 2-dehydro-3-deoxyphosphoheptonate aldolase, TYROSINE
Authors:Cross, P.J, Allison, T.M, Dobson, R.C.J, Jameson, G.B, Parker, E.J.
Deposit date:2012-08-26
Release date:2013-02-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Engineering allosteric control to an unregulated enzyme by transfer of a regulatory domain
Proc.Natl.Acad.Sci.USA, 110, 2013
4IXX
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BU of 4ixx by Molmil
Crystal structure of S213G variant DAH7PS without Tyr bound from Neisseria meningitidis
Descriptor: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, MANGANESE (II) ION, SULFATE ION
Authors:Cross, P.J, Pietersma, A.L, Allison, T.M, Wilson-Coutts, S.M, Cochrane, F.C, Parker, E.J.
Deposit date:2013-01-28
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Neisseria meningitidis expresses a single 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase that is inhibited primarily by phenylalanine.
Protein Sci., 22, 2013
5UXM
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BU of 5uxm by Molmil
Type II DAH7PS from Pseudomonas aeruginosa with Trp bound
Descriptor: CHLORIDE ION, COBALT (II) ION, PHOSPHATE ION, ...
Authors:Sterritt, O.W, Jameson, G.B, Parker, E.J.
Deposit date:2017-02-23
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:A Pseudoisostructural Type II DAH7PS Enzyme from Pseudomonas aeruginosa: Alternative Evolutionary Strategies to Control Shikimate Pathway Flux.
Biochemistry, 57, 2018
5UXN
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BU of 5uxn by Molmil
Type II DAH7PS from Pseudomonas aeruginosa with Tyr bound
Descriptor: CHLORIDE ION, COBALT (II) ION, PHOSPHATE ION, ...
Authors:Sterritt, O.W, Jameson, G.B, Parker, E.J.
Deposit date:2017-02-23
Release date:2018-02-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Pseudoisostructural Type II DAH7PS Enzyme from Pseudomonas aeruginosa: Alternative Evolutionary Strategies to Control Shikimate Pathway Flux.
Biochemistry, 57, 2018
4JTJ
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BU of 4jtj by Molmil
Crystal structure of R117K mutant of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, CHLORIDE ION, SODIUM ION
Authors:Allison, T.M, Cochrane, F.C, Jameson, G.B, Parker, E.J.
Deposit date:2013-03-23
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Examining the Role of Intersubunit Contacts in Catalysis by 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthase.
Biochemistry, 52, 2013
4JTL
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BU of 4jtl by Molmil
Crystal structure of F139G mutant of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, CHLORIDE ION
Authors:Allison, T.M, Cochrane, F.C, Jameson, G.B, Parker, E.J.
Deposit date:2013-03-23
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Examining the Role of Intersubunit Contacts in Catalysis by 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthase.
Biochemistry, 52, 2013
4JTI
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BU of 4jti by Molmil
Crystal structure of F114R/R117Q/F139G mutant of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, CHLORIDE ION
Authors:Allison, T.M, Cochrane, F.C, Jameson, G.B, Parker, E.J.
Deposit date:2013-03-23
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Examining the Role of Intersubunit Contacts in Catalysis by 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthase.
Biochemistry, 52, 2013

224004

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