Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2903 results

1STH
DownloadVisualize
BU of 1sth by Molmil
TWO DISTINCTLY DIFFERENT METAL BINDING MODES ARE SEEN IN X-RAY CRYSTAL STRUCTURES OF STAPHYLOCOCCAL NUCLEASE-COBALT(II)-NUCLEOTIDE COMPLEXES
Descriptor: COBALT (II) ION, STAPHYLOCOCCAL NUCLEASE, THYMIDINE-3',5'-DIPHOSPHATE
Authors:Loll, P.J, Quirk, S, Lattman, E.E.
Deposit date:1994-10-27
Release date:1995-02-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:X-ray crystal structures of staphylococcal nuclease complexed with the competitive inhibitor cobalt(II) and nucleotide.
Biochemistry, 34, 1995
1XZ3
DownloadVisualize
BU of 1xz3 by Molmil
Complex of apoferritin with isoflurane
Descriptor: 1-CHLORO-2,2,2-TRIFLUOROETHYL DIFLUOROMETHYL ETHER, CADMIUM ION, Ferritin light chain
Authors:Liu, R, Loll, P.J, Eckenhoff, R.G.
Deposit date:2004-11-11
Release date:2005-05-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for high-affinity volatile anesthetic binding in a natural 4-helix bundle protein.
Faseb J., 19, 2005
1ZPU
DownloadVisualize
BU of 1zpu by Molmil
Crystal Structure of Fet3p, a Multicopper Oxidase that Functions in Iron Import
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (I) ION, ...
Authors:Taylor, A.B, Stoj, C.S, Ziegler, L, Kosman, D.J, Hart, P.J.
Deposit date:2005-05-17
Release date:2005-10-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The copper-iron connection in biology: Structure of the metallo-oxidase Fet3p.
Proc.Natl.Acad.Sci.Usa, 102, 2005
6O95
DownloadVisualize
BU of 6o95 by Molmil
Structure of the IRAK4 kinase domain with compound 41
Descriptor: Interleukin-1 receptor-associated kinase 4, N-[(2R)-2-(hydroxymethyl)-2-methyl-6-(morpholin-4-yl)-2,3-dihydro-1-benzofuran-5-yl]pyrazolo[1,5-a]pyrimidine-3-carboxamide, SULFATE ION
Authors:Yu, C, Drobnick, J, Bryan, M.C, Kiefer, J, Lupardus, P.J.
Deposit date:2019-03-13
Release date:2019-05-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Development of Potent and Selective Pyrazolopyrimidine IRAK4 Inhibitors.
J.Med.Chem., 62, 2019
1Y42
DownloadVisualize
BU of 1y42 by Molmil
Crystal structure of a C-terminally truncated CYT-18 protein
Descriptor: TYROSINE, Tyrosyl-tRNA synthetase, mitochondrial
Authors:Paukstelis, P.J, Coon, R, Madabusi, L, Nowakowski, J, Monzingo, A, Robertus, J, Lambowitz, A.M.
Deposit date:2004-11-29
Release date:2005-02-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A tyrosyl-tRNA synthetase adapted to function in group I intron splicing by acquiring a new RNA binding surface.
Mol.Cell, 17, 2005
4RO7
DownloadVisualize
BU of 4ro7 by Molmil
Sequence and structure of a self-assembled 3-D DNA crystal: D(GGAAAGCTTGGAG)
Descriptor: D(GGAAAGCTTGGAG), MAGNESIUM ION
Authors:Saoji, M.M, Paukstelis, P.J.
Deposit date:2014-10-28
Release date:2015-06-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Probing the role of sequence in the assembly of three-dimensional DNA crystals.
Biopolymers, 103, 2015
4RO4
DownloadVisualize
BU of 4ro4 by Molmil
Sequence and structure of a self-assembled 3-D DNA crystal: D(GGAAACGTTGGAG)
Descriptor: D(GGAAACGTTGGAG), MAGNESIUM ION
Authors:Saoji, M.M, Paukstelis, P.J.
Deposit date:2014-10-27
Release date:2015-06-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Probing the role of sequence in the assembly of three-dimensional DNA crystals.
Biopolymers, 103, 2015
4RP1
DownloadVisualize
BU of 4rp1 by Molmil
Sequence and structure of a self-assembled 3-D DNA crystal: D(GGATACGTAGGAG)
Descriptor: D(GGATACGTAGGAG), MAGNESIUM ION
Authors:Saoji, M.M, Paukstelis, P.J.
Deposit date:2014-10-29
Release date:2015-06-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Probing the role of sequence in the assembly of three-dimensional DNA crystals.
Biopolymers, 103, 2015
1YIL
DownloadVisualize
BU of 1yil by Molmil
Structure of Hen egg white lysozyme soaked with Cu2-Xylylbicyclam
Descriptor: 1,1'-[1,4-PHENYLENEBIS(METHYLENE)]BIS[1,4,8,11-TETRAAZA-CYCLOTETRADECANE]CU(II)2, CHLORIDE ION, Lysozyme C, ...
Authors:Hunter, T.M, McNae, I.W, Liang, X, Bella, J, Parsons, S, Walkinshaw, M.D, Sadler, P.J.
Deposit date:2005-01-12
Release date:2005-02-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Protein recognition of macrocycles: binding of anti-HIV metallocyclams to lysozyme
Proc.Natl.Acad.Sci.Usa, 102, 2005
1CDS
DownloadVisualize
BU of 1cds by Molmil
STRUCTURE OF A SOLUBLE, GLYCOSYLATED FORM OF THE HUMAN COMPLEMENT REGULATORY PROTEIN CD59
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CD59
Authors:Fletcher, C.M, Harrison, R.A, Lachmann, P.J, Neuhaus, D.
Deposit date:1994-06-01
Release date:1994-09-30
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:Structure of a soluble, glycosylated form of the human complement regulatory protein CD59.
Structure, 2, 1994
1YHD
DownloadVisualize
BU of 1yhd by Molmil
The solution structure of YGGX from Escherichia Coli
Descriptor: UPF0269 protein yggX
Authors:Osborne, M.J, Siddiqui, N, Landgraf, D, Pomposiello, P.J, Gehring, K.
Deposit date:2005-01-07
Release date:2005-01-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of the oxidative stress-related protein YggX from Escherichia coli.
Protein Sci., 14, 2005
1ZS8
DownloadVisualize
BU of 1zs8 by Molmil
Crystal Structure of the Murine MHC Class Ib Molecule M10.5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, histocompatibility 2, ...
Authors:Olson, R, Huey-Tubman, K.E, Dulac, C, Bjorkman, P.J.
Deposit date:2005-07-22
Release date:2005-07-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of a pheromone receptor-associated MHC molecule with an open and empty groove.
Plos Biol., 3, 2005
2A9H
DownloadVisualize
BU of 2a9h by Molmil
NMR structural studies of a potassium channel / charybdotoxin complex
Descriptor: Voltage-gated potassium channel, charybdotoxin
Authors:Yu, L, Sun, C, Song, D, Shen, J, Xu, N, Gunasekera, A, Hajduk, P.J, Olejniczak, E.T.
Deposit date:2005-07-11
Release date:2006-01-10
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance structural studies of a potassium channel-charybdotoxin complex.
Biochemistry, 44, 2005
1YSW
DownloadVisualize
BU of 1ysw by Molmil
Solution structure of the anti-apoptotic protein Bcl-2 complexed with an acyl-sulfonamide-based ligand
Descriptor: 3-NITRO-N-{4-[2-(2-PHENYLETHYL)-1,3-BENZOTHIAZOL-5-YL]BENZOYL}-4-{[2-(PHENYLSULFANYL)ETHYL]AMINO}BENZENESULFONAMIDE, Apoptosis regulator Bcl-2
Authors:Oltersdorf, T, Elmore, S.W, Shoemaker, A.R, Armstrong, R.C, Augeri, D.J, Belli, B.A, Bruncko, M, Deckwerth, T.L, Dinges, J, Hajduk, P.J, Joseph, M.K, Kitada, S, Korsmeyer, S.J, Kunzer, A.R, Letai, A, Li, C, Mitten, M.J, Nettesheim, D.G, Ng, S, Nimmer, P.M, O'Connor, J.M, Oleksijew, A, Petros, A.M, Reed, J.C, Shen, W, Tahir, S.K, Thompson, C.B, Tomaselli, K.J, Wang, B, Wendt, M.D, Zhang, H, Fesik, S.W, Rosenberg, S.H.
Deposit date:2005-02-09
Release date:2005-06-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:An inhibitor of Bcl-2 family proteins induces regression of solid tumours
Nature, 435, 2005
1YSG
DownloadVisualize
BU of 1ysg by Molmil
Solution Structure of the Anti-apoptotic Protein Bcl-xL in Complex with "SAR by NMR" Ligands
Descriptor: 4'-FLUORO-1,1'-BIPHENYL-4-CARBOXYLIC ACID, 5,6,7,8-TETRAHYDRONAPHTHALEN-1-OL, Apoptosis regulator Bcl-X
Authors:Oltersdorf, T, Elmore, S.W, Shoemaker, A.R, Armstrong, R.C, Augeri, D.J, Belli, B.A, Bruncko, M, Deckwerth, T.L, Dinges, J, Hajduk, P.J, Joseph, M.K, Kitada, S, Korsmeyer, S.J, Kunzer, A.R, Letai, A, Li, C, Mitten, M.J, Nettesheim, D.G, Ng, S, Nimmer, P.M, O'Connor, J.M, Oleksijew, A, Petros, A.M, Reed, J.C, Shen, W, Tahir, S.K, Thompson, C.B, Tomaselli, K.J, Wang, B, Wendt, M.D, Zhang, H, Fesik, S.W, Rosenberg, S.H.
Deposit date:2005-02-08
Release date:2005-06-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:An inhibitor of Bcl-2 family proteins induces regression of solid tumours
Nature, 435, 2005
1YSI
DownloadVisualize
BU of 1ysi by Molmil
Solution structure of the anti-apoptotic protein Bcl-xL in complex with an acyl-sulfonamide-based ligand
Descriptor: Apoptosis regulator Bcl-X, N-[(4'-FLUORO-1,1'-BIPHENYL-4-YL)CARBONYL]-3-NITRO-4-{[2-(PHENYLSULFANYL)ETHYL]AMINO}BENZENESULFONAMIDE
Authors:Oltersdorf, T, Elmore, S.W, Shoemaker, A.R, Armstrong, R.C, Augeri, D.J, Belli, B.A, Bruncko, M, Deckwerth, T.L, Dinges, J, Hajduk, P.J, Joseph, M.K, Kitada, S, Korsmeyer, S.J, Kunzer, A.R, Letai, A, Li, C, Mitten, M.J, Nettesheim, D.G, Ng, S, Nimmer, P.M, O'Connor, J.M, Oleksijew, A, Petros, A.M, Reed, J.C, Shen, W, Tahir, S.K, Thompson, C.B, Tomaselli, K.J, Wang, B, Wendt, M.D, Zhang, H, Fesik, S.W, Rosenberg, S.H.
Deposit date:2005-02-08
Release date:2005-06-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:An inhibitor of Bcl-2 family proteins induces regression of solid tumours
Nature, 435, 2005
1T7W
DownloadVisualize
BU of 1t7w by Molmil
Zn-alpha-2-glycoprotein; CHO-ZAG PEG 400
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Zinc-alpha-2-glycoprotein
Authors:Delker, S.L, West Jr, A.P, McDermott, L, Kennedy, M.W, Bjorkman, P.J.
Deposit date:2004-05-11
Release date:2004-12-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystallographic studies of ligand binding by Zn-alpha2-glycoprotein.
J.Struct.Biol., 148, 2004
1YSX
DownloadVisualize
BU of 1ysx by Molmil
Solution structure of domain 3 from human serum albumin complexed to an anti-apoptotic ligand directed against Bcl-xL and Bcl-2
Descriptor: 4-({2-[(2,4-DIMETHYLPHENYL)SULFANYL]ETHYL}AMINO)-N-[(4'-FLUORO-1,1'-BIPHENYL-4-YL)CARBONYL]-3-NITROBENZENESULFONAMIDE, Serum albumin
Authors:Oltersdorf, T, Elmore, S.W, Shoemaker, A.R, Armstrong, R.C, Augeri, D.J, Belli, B.A, Bruncko, M, Deckwerth, T.L, Dinges, J, Hajduk, P.J, Joseph, M.K, Kitada, S, Korsmeyer, S.J, Kunzer, A.R, Letai, A, Li, C, Mitten, M.J, Nettesheim, D.G, Ng, S, Nimmer, P.M, O'Connor, J.M, Oleksijew, A, Petros, A.M, Reed, J.C, Shen, W, Tahir, S.K, Thompson, C.B, Tomaselli, K.J, Wang, B, Wendt, M.D, Zhang, H, Fesik, S.W, Rosenberg, S.H.
Deposit date:2005-02-09
Release date:2005-06-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:An inhibitor of Bcl-2 family proteins induces regression of solid tumours
Nature, 435, 2005
1T7X
DownloadVisualize
BU of 1t7x by Molmil
Zn-alpha-2-glycoprotein; refolded CHO-ZAG PEG 400
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Zinc-alpha-2-glycoprotein
Authors:Delker, S.L, West Jr, A.P, McDermott, L, Kennedy, M.W, Bjorkman, P.J.
Deposit date:2004-05-11
Release date:2004-12-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystallographic studies of ligand binding by Zn-alpha2-glycoprotein.
J.Struct.Biol., 148, 2004
1T7Z
DownloadVisualize
BU of 1t7z by Molmil
Zn-alpha-2-glycoprotein; baculo-ZAG no PEG, no glycerol
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Zinc-alpha-2-glycoprotein
Authors:Delker, S.L, West Jr, A.P, McDermott, L, Kennedy, M.W, Bjorkman, P.J.
Deposit date:2004-05-11
Release date:2004-12-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic studies of ligand binding by Zn-alpha2-glycoprotein.
J.Struct.Biol., 148, 2004
1XBD
DownloadVisualize
BU of 1xbd by Molmil
INTERNAL XYLAN BINDING DOMAIN FROM CELLULOMONAS FIMI XYLANASE D, NMR, 5 STRUCTURES
Descriptor: XYLANASE D
Authors:Simpson, P.J, Bolam, D.N, Cooper, A, Ciruela, A, Hazlewood, G.P, Gilbert, H.J, Williamson, M.P.
Deposit date:1998-10-16
Release date:1999-07-21
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:A family IIb xylan-binding domain has a similar secondary structure to a homologous family IIa cellulose-binding domain but different ligand specificity.
Structure Fold.Des., 7, 1999
1ZNM
DownloadVisualize
BU of 1znm by Molmil
A zinc finger with an artificial beta-turn, original sequence taken from the third zinc finger domain of the human transcriptional repressor protein YY1 (YING and YANG 1, a delta transcription factor), nmr, 34 structures
Descriptor: YY1, ZINC ION
Authors:Viles, J.H, Patel, S.U, Mitchell, J.B.O, Moody, C.M, Justice, D.E, Uppenbrink, J, Doyle, P.M, Harris, C.J, Sadler, P.J, Thornton, J.M.
Deposit date:1997-11-20
Release date:1998-04-01
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Design, synthesis and structure of a zinc finger with an artificial beta-turn.
J.Mol.Biol., 279, 1998
1Z97
DownloadVisualize
BU of 1z97 by Molmil
Human Carbonic Anhydrase III: Structural and Kinetic Study of Catalysis and Proton Transfer.
Descriptor: Carbonic anhydrase III, ZINC ION
Authors:Duda, D.M, Tu, C, Fisher, S.Z, An, H, Yoshioka, C, Govindasamy, L, Laipis, P.J, Agbandje-McKenna, M, Silverman, D.N, McKenna, R.
Deposit date:2005-03-31
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Human Carbonic Anhydrase III: Structural and Kinetic Study of Catalysis and Proton Transfer
Biochemistry, 44, 2005
1Z2X
DownloadVisualize
BU of 1z2x by Molmil
Crystal structure of mouse Vps29
Descriptor: Vacuolar protein sorting 29
Authors:Collins, B.M, Skinner, C.F, Watson, P.J, Seaman, M.N.J, Owen, D.J.
Deposit date:2005-03-10
Release date:2005-06-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer assembly
NAT.STRUCT.MOL.BIOL., 12, 2005
1Z8L
DownloadVisualize
BU of 1z8l by Molmil
Crystal structure of prostate-specific membrane antigen, a tumor marker and peptidase
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Davis, M.I, Bennett, M.J, Thomas, L.M, Bjorkman, P.J.
Deposit date:2005-03-30
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of prostate-specific membrane antigen, a tumor marker and peptidase
Proc.Natl.Acad.Sci.USA, 102, 2005

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon