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PDB: 2911 件

7TQP
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Structure of human TREX1
分子名称: SULFATE ION, Three-prime repair exonuclease 1
著者Zhou, W, Richmond-Buccola, D, Kranzusch, P.J.
登録日2022-01-26
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis of human TREX1 DNA degradation and autoimmune disease.
Nat Commun, 13, 2022
4WSS
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The crystal structure of hemagglutinin form A/chicken/New York/14677-13/1998 in complex with LSTa
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
著者Yang, H, Carney, P.J, Chang, J.C, Villanueva, J.M, Stevens, J.
登録日2014-10-28
公開日2015-02-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure and receptor binding preferences of recombinant hemagglutinins from avian and human h6 and h10 influenza a virus subtypes.
J.Virol., 89, 2015
4WSV
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The crystal structure of hemagglutinin from A/Taiwan/1/2013 in complex with 6'SLN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, ...
著者Yang, H, Carney, P.J, Chang, J.C, Villanueva, J.M, Stevens, J.
登録日2014-10-28
公開日2015-02-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure and receptor binding preferences of recombinant hemagglutinins from avian and human h6 and h10 influenza a virus subtypes.
J.Virol., 89, 2015
6ORN
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Modified BG505 SOSIP-based immunogen RC1 in complex with the elicited V3-glycan patch bNAb 10-1074
分子名称: 10-1074 antibody Fab heavy chain, 10-1074 antibody Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Abernathy, M.E, Gristick, H.B, Bjorkman, P.J.
登録日2019-04-30
公開日2019-06-12
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.05 Å)
主引用文献Immunization expands B cells specific to HIV-1 V3 glycan in mice and macaques.
Nature, 570, 2019
6ORO
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Modified BG505 SOSIP-based immunogen RC1 in complex with the elicited V3-glycan patch antibody Ab874NHP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ab874NHP antibody Fab heavy chain, ...
著者Abernathy, M.E, Gristick, H.B, Bjorkman, P.J.
登録日2019-04-30
公開日2019-06-12
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Immunization expands B cells specific to HIV-1 V3 glycan in mice and macaques.
Nature, 570, 2019
5NQ2
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'Porcine (Sus scrofa) Major Histocompatibility Complex, class I, presenting IAYERMCNI
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, CALCIUM ION, ...
著者Rizkallah, P.J, Tungatt, K, Sewell, A.K.
登録日2017-04-19
公開日2018-04-25
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Induction of influenza-specific local CD8 T-cells in the respiratory tract after aerosol delivery of vaccine antigen or virus in the Babraham inbred pig.
Plos Pathog., 14, 2018
6OX6
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Crystal structure of the complex between the Type VI effector Tas1 and its immunity protein
分子名称: ACETATE ION, PA14_01140, Tas1
著者Ahmad, S, Stogios, P.J, Skarina, T, Whitney, J, Savchenko, A, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-05-13
公開日2019-09-18
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献An interbacterial toxin inhibits target cell growth by synthesizing (p)ppApp.
Nature, 575, 2019
7U0C
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Crystal structure of broadly neutralizing antibody HEPC3.4
分子名称: HEPC3.4 Fab Heavy Chain, HEPC3.4 Fab Light Chain
著者Flyak, A.I, Bjorkman, P.J.
登録日2022-02-17
公開日2022-06-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Computational identification of HCV neutralizing antibodies with a common HCDR3 disulfide bond motif in the antibody repertoires of infected individuals.
Nat Commun, 13, 2022
7U0B
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Crystal structure of broadly neutralizing antibody HEPC3.1
分子名称: HEPC3.1 Fab Heavy Chain, HEPC3.1 Fab Light Chain
著者Flyak, A.I, Bjorkman, P.J.
登録日2022-02-17
公開日2022-06-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Computational identification of HCV neutralizing antibodies with a common HCDR3 disulfide bond motif in the antibody repertoires of infected individuals.
Nat Commun, 13, 2022
5N1Y
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HLA-A02 carrying MVWGPDPLYV
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
著者Rizkallah, P.J, Bulek, A.M, Cole, D.K, Sewell, A.K.
登録日2017-02-06
公開日2017-02-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Hotspot autoimmune T cell receptor binding underlies pathogen and insulin peptide cross-reactivity.
J. Clin. Invest., 126, 2016
5N2L
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Crystal structure of the second bromodomain of human BRD2 in complex with a tetrahydroquinoline analogue
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 2, SULFATE ION, ...
著者Tallant, C, Slavish, P.J, Siejka, P, Bharatham, N, Shadrick, W.R, Chai, S, Young, B.M, Boyd, V.A, Heroven, C, Wiggers, H.J, Picaud, S, Fedorov, O, Krojer, T, Chen, T, Lee, R.E, Guy, R.K, Shelat, A.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2017-02-07
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structure of the second bromodomain of human BRD2 in complex with a tetrahydroquinoline analogue
To Be Published
6OKP
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B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074
分子名称: 10-1074 Heavy Chain,10-1074 Heavy Chain, 10-1074 Light Chain,10-1074 Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Barnes, C.O, Bjorkman, P.J.
登録日2019-04-14
公開日2019-06-05
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Broad and Potent Neutralizing Antibodies Recognize the Silent Face of the HIV Envelope.
Immunity, 50, 2019
1JQA
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Bacillus stearothermophilus glycerol dehydrogenase complex with glycerol
分子名称: GLYCEROL, Glycerol Dehydrogenase, ZINC ION
著者Ruzheinikov, S.N, Burke, J, Sedelnikova, S, Baker, P.J, Taylor, R, Bullough, P.A, Muir, N.M, Gore, M.G, Rice, D.W.
登録日2001-08-04
公開日2001-10-03
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Glycerol dehydrogenase. structure, specificity, and mechanism of a family III polyol dehydrogenase.
Structure, 9, 2001
6O62
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BU of 6o62 by Molmil
Crystal structure of Sec4p, a Rab family GTPase from Candida albicans
分子名称: GUANOSINE-5'-DIPHOSPHATE, Ras-related protein SEC4
著者Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-03-05
公開日2019-04-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献To be published
To Be Published
5NBZ
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Wzz dodecamer fitted by MDFF to the Wzz experimental map from cryo-EM
分子名称: WzzB
著者Ford, R.C, Kargas, V, Collins, R.F, Whitfield, C, Clarke, B.R, Siebert, A, Bond, P.J, Clare, D.K.
登録日2017-03-02
公開日2017-04-05
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Full-length, Oligomeric Structure of Wzz Determined by Cryoelectron Microscopy Reveals Insights into Membrane-Bound States.
Structure, 25, 2017
5NHN
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Super-Folder Green Fluorescent Protein Artificiall dimer linked via 148 position
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Green fluorescent protein, ...
著者Worthy, H.L, Rizkallah, P.J.
登録日2017-03-22
公開日2018-09-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Positive functional synergy of structurally integrated artificial protein dimers assembled by Click chemistry
Commun Chem, 2019
6MEG
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BU of 6meg by Molmil
Crystal structure of human monoclonal antibody HEPC46
分子名称: antibody HEPC46 Heavy Chain, antibody HEPC46 Light Chain
著者Flyak, A.I, Bjorkman, P.J.
登録日2018-09-06
公開日2018-11-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献HCV Broadly Neutralizing Antibodies Use a CDRH3 Disulfide Motif to Recognize an E2 Glycoprotein Site that Can Be Targeted for Vaccine Design.
Cell Host Microbe, 24, 2018
6ZRV
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BU of 6zrv by Molmil
Crystal Structure of Stabilized Active Plasminogen Activator Inhibitor-1 (PAI-1-W175F) in Complex with an Inhibitory Nanobody (VHH-s-a93, Nb93)
分子名称: Plasminogen activator inhibitor 1, VHH-s-a93 (Nb93)
著者Sillen, M, Weeks, S.D, Strelkov, S.V, Declerck, P.J.
登録日2020-07-15
公開日2020-08-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural Insights into the Mechanism of a Nanobody That Stabilizes PAI-1 and Modulates Its Activity.
Int J Mol Sci, 21, 2020
5NI3
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sfGFP 204-204 mutant dimer
分子名称: CHLORIDE ION, GLYCEROL, Green fluorescent protein, ...
著者Worthy, H.L, Rizkallah, P.J.
登録日2017-03-23
公開日2018-09-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Association of Fluorescent Protein Pairs and Its Significant Impact on Fluorescence and Energy Transfer
Adv Sci, 2020
5IR0
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BU of 5ir0 by Molmil
Crystal structure of protein of unknown function ORF19 from Vibrio cholerae O1 PICI-like element, C57S I109M mutant
分子名称: CITRIC ACID, Uncharacterized protein ORF19
著者Stogios, P.J, Wawrzak, Z, Skarina, T, Di Leo, R, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-03-11
公開日2016-03-30
実験手法X-RAY DIFFRACTION (3.297 Å)
主引用文献Crystal structure of protein of unknown function ORF19 from Vibrio cholerae O1 PICI-like element, C57S I109M mutant
To Be Published
5NMD
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868 TCR Specific for HLA A02 presenting HIV Epitope SLYNTVATL
分子名称: 1,2-ETHANEDIOL, Human T-cell Receptor, beta chain, ...
著者Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
登録日2017-04-05
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Dual Molecular Mechanisms Govern Escape at Immunodominant HLA A2-Restricted HIV Epitope.
Front Immunol, 8, 2017
4Z02
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Crystal structure of BRD1 in complex with Isoquinoline-3-carboxylic acid
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 1, UNKNOWN ATOM OR ION, ...
著者DONG, A, IQBAL, A, WALKER, J.R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, BROWN, P.J, Structural Genomics Consortium (SGC)
登録日2015-03-25
公開日2015-04-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal structure of BRD1 incomplex with Isoquinoline-3-carboxylic acid
to be published
7TBU
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Crystal structure of the 5-enolpyruvate-shikimate-3-phosphate synthase (EPSPS) domain of Aro1 from Candida albicans in complex with shikimate-3-phosphate
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5-enolpyruvylshikimate-3-phosphate synthase, SHIKIMATE-3-PHOSPHATE
著者Stogios, P.J, Evdokimova, E, Michalska, K, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-12-22
公開日2022-03-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Molecular analysis and essentiality of Aro1 shikimate biosynthesis multi-enzyme in Candida albicans.
Life Sci Alliance, 5, 2022
5NQ0
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Porcine (Sus scrofa) Major Histocompatibility Complex, class I, presenting DFEREGYSL
分子名称: 1,2-ETHANEDIOL, ASP-PHE-GLU-ARG-GLU-GLY-TYR-SER-LEU, Beta-2-microglobulin, ...
著者Rizkallah, P.J, Tungatt, K, Sewell, A.K.
登録日2017-04-19
公開日2018-04-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Induction of influenza-specific local CD8 T-cells in the respiratory tract after aerosol delivery of vaccine antigen or virus in the Babraham inbred pig.
Plos Pathog., 14, 2018
8E0Y
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DAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase complexed with DAHP oxime, Pr(III), and Pi in unbound:(bound)2:other Conformations
分子名称: ACETATE ION, CITRATE ANION, DAHP Oxime, ...
著者Berti, P.J, Junop, M.S, Grainger, R.
登録日2022-08-09
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Role of Half-of-Sites Reactivity and Inter-Subunit Communications in DAHP Synthase Catalysis and Regulation.
Biochemistry, 61, 2022

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件を2024-08-14に公開中

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