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PDB: 2903 results

3KBF
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BU of 3kbf by Molmil
C. elegans Cu,Zn Superoxide Dismutase
Descriptor: COPPER (II) ION, SULFATE ION, Superoxide dismutase [Cu-Zn], ...
Authors:Pakhomova, O.N, Taylor, A.B, Schuermann, J.P, Culotta, V.L, Hart, P.J.
Deposit date:2009-10-20
Release date:2010-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:X-ray Crystal Structure of C. elegans Cu,Zn Superoxide Dismutase
To be Published
3KHB
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BU of 3khb by Molmil
Crystal structure of Escherichia coli AlkB with Co(II) and 2-OG
Descriptor: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase alkB, COBALT (II) ION
Authors:Hollis, T, Holland, P.J.
Deposit date:2009-10-30
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and mutational analysis of Escherichia coli AlkB provides insight into substrate specificity and DNA damage searching.
Plos One, 5, 2010
6FJO
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BU of 6fjo by Molmil
Adenovirus species 26 knob protein, very high resolution
Descriptor: Fiber, GLUTAMIC ACID, GLYCEROL, ...
Authors:Rizkallah, P.J, Parker, A.L, Baker, A.T.
Deposit date:2018-01-22
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Human adenovirus type 26 uses sialic acid-bearing glycans as a primary cell entry receptor.
Sci Adv, 5, 2019
6PIP
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BU of 6pip by Molmil
NMR Solution structure of cyclic tachyplesin III
Descriptor: Tachyplesin-3
Authors:Harvey, P.J, Troeira Henriques, S, Vernen, F.
Deposit date:2019-06-26
Release date:2019-09-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Characterization of Tachyplesin Peptides and Their Cyclized Analogues to Improve Antimicrobial and Anticancer Properties.
Int J Mol Sci, 20, 2019
2N2Q
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BU of 2n2q by Molmil
NMR solution structure of HsAFP1
Descriptor: Defensin-like protein 1
Authors:Harvey, P.J, Craik, D.J, Vriens, K.
Deposit date:2015-05-11
Release date:2015-07-22
Last modified:2015-08-19
Method:SOLUTION NMR
Cite:Synergistic Activity of the Plant Defensin HsAFP1 and Caspofungin against Candida albicans Biofilms and Planktonic Cultures.
Plos One, 10, 2015
3KHC
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BU of 3khc by Molmil
Crystal Structure of Escherichia coli AlkB in complex with ssDNA containing a 1-methylguanine lesion
Descriptor: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase alkB, COBALT (II) ION, ...
Authors:Hollis, T, Holland, P.J.
Deposit date:2009-10-30
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and mutational analysis of Escherichia coli AlkB provides insight into substrate specificity and DNA damage searching.
Plos One, 5, 2010
8SMG
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BU of 8smg by Molmil
Structure of SPO1 phage Tad2 in complex with 1''-2' gcADPR
Descriptor: (1S,3R,4R,6R,9S,11R,14R,15S,16R,18R)-4-(6-amino-9H-purin-9-yl)-9,11,15,16,18-pentahydroxy-2,5,8,10,12,17-hexaoxa-9lambda~5~,11lambda~5~-diphosphatricyclo[12.2.1.1~3,6~]octadecane-9,11-dione, Gp34.65
Authors:Lu, A, Yirmiya, E, Leavitt, A, Avraham, C, Osterman, I, Garb, J, Antine, S.P, Mooney, S.E, Hobbs, S.J, Amitai, G, Sorek, R, Kranzusch, P.J.
Deposit date:2023-04-26
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Phages overcome bacterial immunity via diverse anti-defence proteins.
Nature, 625, 2024
8SM3
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BU of 8sm3 by Molmil
Structure of Bacillus cereus VD045 Gabija GajA-GajB Complex
Descriptor: Endonuclease GajA, Gabija protein GajB, SULFATE ION
Authors:Antine, S.P, Mooney, S.E, Johnson, A.G, Kranzusch, P.J.
Deposit date:2023-04-25
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of Gabija anti-phage defence and viral immune evasion.
Nature, 625, 2024
2CNW
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BU of 2cnw by Molmil
GDPALF4 complex of the SRP GTPases Ffh and FtsY
Descriptor: CELL DIVISION PROTEIN FTSY, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, ...
Authors:Focia, P.J, Gawronski-Salerno, J, Coon V, J.S, Freymann, D.M.
Deposit date:2006-05-24
Release date:2006-10-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structure of a Gdp:Alf(4) Complex of the Srp Gtpases Ffh and Ftsy, and Identification of a Peripheral Nucleotide Interaction Site.
J.Mol.Biol., 360, 2006
8SMD
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BU of 8smd by Molmil
Structure of Clostridium botulinum prophage Tad1 in complex with 1''-3' gcADPR
Descriptor: (2R,3R,3aS,5S,6R,7S,8R,11R,13S,15aR)-2-(6-amino-9H-purin-9-yl)-3,6,7,11,13-pentahydroxyoctahydro-2H,5H,11H,13H-5,8-epoxy-11lambda~5~,13lambda~5~-furo[2,3-g][1,3,5,9,2,4]tetraoxadiphosphacyclotetradecine-11,13-dione, ABC transporter ATPase
Authors:Lu, A, Yirmiya, E, Leavitt, A, Avraham, C, Osterman, I, Garb, J, Antine, S.P, Mooney, S.E, Hobbs, S.J, Amitai, G, Sorek, R, Kranzusch, P.J.
Deposit date:2023-04-26
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Phages overcome bacterial immunity via diverse anti-defence proteins.
Nature, 625, 2024
8SMF
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BU of 8smf by Molmil
Structure of SPO1 phage Tad2 in complex with 1''-3' gcADPR
Descriptor: (2R,3R,3aS,5S,6R,7S,8R,11R,13S,15aR)-2-(6-amino-9H-purin-9-yl)-3,6,7,11,13-pentahydroxyoctahydro-2H,5H,11H,13H-5,8-epoxy-11lambda~5~,13lambda~5~-furo[2,3-g][1,3,5,9,2,4]tetraoxadiphosphacyclotetradecine-11,13-dione, Gp34.65, MAGNESIUM ION
Authors:Lu, A, Yirmiya, E, Leavitt, A, Avraham, C, Osterman, I, Garb, J, Antine, S.P, Mooney, S.E, Hobbs, S.J, Amitai, G, Sorek, R, Kranzusch, P.J.
Deposit date:2023-04-26
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Phages overcome bacterial immunity via diverse anti-defence proteins.
Nature, 625, 2024
6FR3
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BU of 6fr3 by Molmil
003 TCR Study of CDR Loop Flexibility
Descriptor: 003 TCR Alpha Chain, 003 TCR Beta Chain, 1,2-ETHANEDIOL, ...
Authors:Rizkallah, P.J, Cole, D.K.
Deposit date:2018-02-15
Release date:2018-04-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility.
Front Immunol, 9, 2018
1JQA
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BU of 1jqa by Molmil
Bacillus stearothermophilus glycerol dehydrogenase complex with glycerol
Descriptor: GLYCEROL, Glycerol Dehydrogenase, ZINC ION
Authors:Ruzheinikov, S.N, Burke, J, Sedelnikova, S, Baker, P.J, Taylor, R, Bullough, P.A, Muir, N.M, Gore, M.G, Rice, D.W.
Deposit date:2001-08-04
Release date:2001-10-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Glycerol dehydrogenase. structure, specificity, and mechanism of a family III polyol dehydrogenase.
Structure, 9, 2001
6FR5
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BU of 6fr5 by Molmil
HA1.7 TCR Study of CDR Loop Flexibility
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K.
Deposit date:2018-02-15
Release date:2018-04-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility.
Front Immunol, 9, 2018
4X5T
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BU of 4x5t by Molmil
alpha 1 glycine receptor transmembrane structure fused to the extracellular domain of GLIC
Descriptor: ACETATE ION, CHLORIDE ION, NICKEL (II) ION, ...
Authors:Sauguet, L, Corringer, P.J, Huon, C, Delarue, M.
Deposit date:2014-12-05
Release date:2015-02-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Allosteric and hyperekplexic mutant phenotypes investigated on an alpha 1 glycine receptor transmembrane structure.
Proc.Natl.Acad.Sci.USA, 112, 2015
6PPY
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BU of 6ppy by Molmil
Crystal structure of NeuNAc oxime complexed with NeuB, an N-acetylneuraminate synthase from Neisseria meningitidis
Descriptor: (2E,4S,5R,6R,7S,8R)-5-(acetylamino)-4,6,7,8,9-pentahydroxy-2-(hydroxyimino)nonanoic acid (non-preferred name), N-acetylneuraminate synthase
Authors:Rosanally, A.Z, Junop, M.J, Berti, P.J.
Deposit date:2019-07-08
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:NeuNAc Oxime: A Slow-Binding and Effectively Irreversible Inhibitor of the Sialic Acid Synthase NeuB.
Biochemistry, 58, 2019
8T5I
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BU of 8t5i by Molmil
Crystal structure of human WDR5 in complex with MR4397
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, N-[(2S)-1-(6,7-dihydrothieno[3,2-c]pyridin-5(4H)-yl)-1-oxopentan-2-yl]-3-[(1H-imidazol-1-yl)methyl]benzamide, ...
Authors:Kimani, S, Dong, A, Li, F, Loppnau, P, Ackloo, S, Vedadi, M, Brown, P.J, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2023-06-13
Release date:2023-08-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of human WDR5 in complex with MR4397
To be published
6VLL
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BU of 6vll by Molmil
The crystal structure of the 2009/H1N1/California PA endonuclease mutant I38T in complex with SJ000986213
Descriptor: MANGANESE (II) ION, Polymerase acidic protein, SULFATE ION, ...
Authors:Cuypers, M.G, Slavish, P.J, Rankovic, Z, White, S.W.
Deposit date:2020-01-24
Release date:2021-02-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:The crystal structure of the 2009 H1N1 PA endonuclease mutant I38T in complex with SJ000986213
To Be Published
4WQ3
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BU of 4wq3 by Molmil
Human calpain PEF(S) with (2Z,2Z')-2,2'-disulfanediylbis(3-(6-bromoindol-3-yl)acrylic acid) bound
Descriptor: (2Z)-3-(6-bromo-1H-indol-3-yl)-2-sulfanylprop-2-enoic acid, CALCIUM ION, Calpain small subunit 1
Authors:Adams, S.E, Robinson, E.J, Rizkallah, P.J, Miller, D.J, Hallett, M.B, Allemann, R.K.
Deposit date:2014-10-21
Release date:2015-09-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Conformationally restricted calpain inhibitors.
Chem Sci, 6, 2015
6PI2
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BU of 6pi2 by Molmil
NMR Solution structure of native tachyplesin II peptide
Descriptor: Tachyplesin II
Authors:Harvey, P.J, Troeira Henriques, S, Vernen, F.
Deposit date:2019-06-25
Release date:2019-09-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Characterization of Tachyplesin Peptides and Their Cyclized Analogues to Improve Antimicrobial and Anticancer Properties.
Int J Mol Sci, 20, 2019
6PI3
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BU of 6pi3 by Molmil
NMR Solution structure of native tachyplesin III peptide
Descriptor: Tachyplesin-3
Authors:Harvey, P.J, Troeira Henriques, S, Vernen, F.
Deposit date:2019-06-25
Release date:2019-09-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Characterization of Tachyplesin Peptides and Their Cyclized Analogues to Improve Antimicrobial and Anticancer Properties.
Int J Mol Sci, 20, 2019
6PIO
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BU of 6pio by Molmil
NMR Solution structure of cyclic tachyplesin II
Descriptor: Tachyplesin-2
Authors:Harvey, P.J, Troeira Henriques, S, Vernen, F.
Deposit date:2019-06-26
Release date:2019-09-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Characterization of Tachyplesin Peptides and Their Cyclized Analogues to Improve Antimicrobial and Anticancer Properties.
Int J Mol Sci, 20, 2019
6PIN
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BU of 6pin by Molmil
NMR Solution structure of cyclic tachyplesin I
Descriptor: Tachyplesin-1
Authors:Harvey, P.J, Troeira Henriques, S, Vernen, F.
Deposit date:2019-06-26
Release date:2019-09-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Characterization of Tachyplesin Peptides and Their Cyclized Analogues to Improve Antimicrobial and Anticancer Properties.
Int J Mol Sci, 20, 2019
2MT4
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BU of 2mt4 by Molmil
Solution structure of the N-terminal domain of NUSA from B. Subtilis
Descriptor: Transcription termination/antitermination protein NusA
Authors:Mobli, M, Lewis, P.J.
Deposit date:2014-08-12
Release date:2015-02-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:RNA polymerase-induced remodelling of NusA produces a pause enhancement complex.
Nucleic Acids Res., 43, 2015
8SME
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BU of 8sme by Molmil
Structure of SPO1 phage Tad2 in apo state
Descriptor: Gp34.65
Authors:Lu, A, Yirmiya, E, Leavitt, A, Avraham, C, Osterman, I, Garb, J, Antine, S.P, Mooney, S.E, Hobbs, S.J, Amitai, G, Sorek, R, Kranzusch, P.J.
Deposit date:2023-04-26
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Phages overcome bacterial immunity via diverse anti-defence proteins.
Nature, 625, 2024

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