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PDB: 46412 results

3SD8
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BU of 3sd8 by Molmil
Crystal structure of Ara-FHNA decamer DNA
Descriptor: 5'-D(*GP*CP*GP*TP*AP*(F4H)P*AP*CP*GP*C)-3', STRONTIUM ION
Authors:Egli, M, Pallan, P.S.
Deposit date:2011-06-08
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural Origins of Opposite Effects on Stability by Axial and Equatorial 3'-Fluoro Modifications of Hexitol Nucleic Acid (HNA)
To be Published
2MKN
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BU of 2mkn by Molmil
Structural Characterization of Interactions between the Double-Stranded RNA-Binding Zinc Finger Protein JAZ and dsRNA
Descriptor: RNA (5'-R(*GP*CP*CP*GP*UP*GP*GP*UP*CP*UP*GP*GP*UP*GP*GP*CP*CP*GP*G)-3'), RNA (5'-R(P*CP*CP*GP*GP*CP*CP*AP*CP*CP*AP*GP*AP*CP*CP*AP*CP*GP*GP*C)-3'), ZINC ION, ...
Authors:Wright, P, Dyson, J, Burge, R, Martinez-Yamout, M.
Deposit date:2014-02-10
Release date:2014-03-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Characterization of Interactions between the Double-Stranded RNA-Binding Zinc Finger Protein JAZ and Nucleic Acids.
Biochemistry, 53, 2014
3SAE
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BU of 3sae by Molmil
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production
Descriptor: Alpha-bisabolene synthase, CHLORIDE ION, GLYCEROL, ...
Authors:McAndrew, R.P, Peralta-Yahya, P.P, DeGiovanni, A, Pereira, J.H, Hadi, M.Z, Keasling, J.D, Adams, P.D.
Deposit date:2011-06-02
Release date:2011-12-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production.
Structure, 19, 2011
2PI6
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BU of 2pi6 by Molmil
Crystal structure of the sheep signalling glycoprotein (SPS-40) complex with 2-methyl-2-4-pentanediol at 1.65A resolution reveals specific binding characteristics of SPS-40
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Chitinase-3-like protein 1, ETHANOL, ...
Authors:Sharma, P, Singh, N, Sharma, S, Kaur, P, Betzel, C, Singh, T.P.
Deposit date:2007-04-13
Release date:2007-05-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Tryptophan as a three-way switch in regulating the function of the secretory signalling glycoprotein (SPS-40) from mammary glands: structure of SPS-40 complexed with 2-methylpentane-2,4-diol at 1.6 A resolution.
Acta Crystallogr.,Sect.D, 65, 2009
2PYF
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BU of 2pyf by Molmil
Crystal Structures of High Affinity Human T-Cell Receptors Bound to pMHC RevealNative Diagonal Binding Geometry Unbound TCR Clone 5-1
Descriptor: SULFATE ION, T-Cell Receptor, Alpha Chain, ...
Authors:Sami, M, Rizkallah, P.J, Dunn, S, Li, Y, Moysey, R, Vuidepot, A, Baston, E, Todorov, P, Molloy, P, Gao, F, Boulter, J.M, Jakobsen, B.K.
Deposit date:2007-05-16
Release date:2007-09-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of high affinity human T-cell receptors bound to peptide major histocompatibility complex reveal native diagonal binding geometry
Protein Eng.Des.Sel., 20, 2007
1HES
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BU of 1hes by Molmil
MU2 ADAPTIN SUBUNIT (AP50) OF AP2 ADAPTOR (SECOND DOMAIN), COMPLEXED WITH P-selectin INTERNALIZATION PEPTIDE SHLGTYGVFTNAA
Descriptor: CLATHRIN COAT ASSEMBLY PROTEIN AP50, P-SELECTIN PEPTIDE
Authors:Owen, D.J, Evans, P.R, Green, S.A.
Deposit date:2000-11-24
Release date:2001-05-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Third Specificity-Determining Site in Mu 2 Adaptin for Sequences Upstream of Yxx Phi Sorting Motifs
Traffic, 2, 2001
2NNX
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BU of 2nnx by Molmil
Crystal Structure of the H46R, H48Q double mutant of human [Cu-Zn] Superoxide Dismutase
Descriptor: SULFATE ION, SUPEROXIDE DISMUTASE [CU-ZN], ZINC ION
Authors:Schuermann, J.P, Hart, P.J.
Deposit date:2006-10-24
Release date:2006-11-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Disease-associated mutations at copper ligand histidine residues of superoxide dismutase 1 diminish the binding of copper and compromise dimer stability
J.Biol.Chem., 282, 2007
2N9F
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BU of 2n9f by Molmil
Glucose as non natural nucleobase
Descriptor: DNA (5'-D(*CP*TP*AP*GP*CP*GP*GP*TP*CP*AP*TP*C)-3'), DNA (5'-D(*GP*AP*TP*GP*AP*CP*(4JA)P*GP*CP*TP*AP*G)-3')
Authors:Gomez-Pinto, I, Vengut-Climent, E, Lucas, R, Avino, A, Eritja, R, Gonzalez-Ibanez, C, Morales, J, Penalver, P, Fonseca-Guerra, C, Bickelhaupt, M.
Deposit date:2015-11-20
Release date:2016-08-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Glucose-Nucleobase Pseudo Base Pairs: Biomolecular Interactions within DNA.
Angew.Chem.Int.Ed.Engl., 55, 2016
2PT3
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BU of 2pt3 by Molmil
Crystal structure of bovine lactoperoxidase at 2.34 A resolution reveals multiple anion binding sites
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Lactoperoxidase, ...
Authors:Singh, A.K, Singh, N, Sharma, S, Kaur, P, Betzel, C, Singh, T.P.
Deposit date:2007-05-08
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structure of bovine lactoperoxidase at 2.34 A resolution reveals multiple anion binding sites
To be Published
2PUM
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BU of 2pum by Molmil
Crystal structure of bovine lactoperoxidase complex with catechol and iodide at 2.7 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CATECHOL, ...
Authors:Singh, A.K, Singh, N, Sharma, S, Kaur, P, Singh, T.P.
Deposit date:2007-05-09
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of bovine lactoperoxidase complex with catechol and iodide at 2.7 A resolution
To be Published
6PPY
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BU of 6ppy by Molmil
Crystal structure of NeuNAc oxime complexed with NeuB, an N-acetylneuraminate synthase from Neisseria meningitidis
Descriptor: (2E,4S,5R,6R,7S,8R)-5-(acetylamino)-4,6,7,8,9-pentahydroxy-2-(hydroxyimino)nonanoic acid (non-preferred name), N-acetylneuraminate synthase
Authors:Rosanally, A.Z, Junop, M.J, Berti, P.J.
Deposit date:2019-07-08
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:NeuNAc Oxime: A Slow-Binding and Effectively Irreversible Inhibitor of the Sialic Acid Synthase NeuB.
Biochemistry, 58, 2019
6CP6
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BU of 6cp6 by Molmil
Monomer yeast ATP synthase (F1Fo) reconstituted in nanodisc.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase protein 8, ...
Authors:Srivastava, A.P, Luo, M, Symersky, J, Liao, M.F, Mueller, D.M.
Deposit date:2018-03-13
Release date:2018-04-11
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution cryo-EM analysis of the yeast ATP synthase in a lipid membrane.
Science, 360, 2018
8VVB
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BU of 8vvb by Molmil
Influenza antibody L5A7 Fab
Descriptor: L5A7 Heavy Chain, L5A7 Light Chain
Authors:Harris, D.R, Olia, A.S, Kwong, P.D.
Deposit date:2024-01-30
Release date:2024-05-22
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Anti-idiotype isolation of a broad and potent influenza A virus-neutralizing human antibody.
Front Immunol, 15, 2024
3ZDB
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BU of 3zdb by Molmil
Structure of E. coli ExoIX in complex with the palindromic 5ov4 DNA oligonucleotide, di-magnesium and potassium
Descriptor: 5OV4 DNA, 5'-D(*AP*AP*AP*AP*GP*CP*GP*TP*AP*CP*GP*CP)-3', ACETATE ION, ...
Authors:Hemsworth, G.R, Anstey-Gilbert, C.S, Flemming, C.S, Hodskinson, M.R.G, Zhang, J, Sedelnikova, S.E, Stillman, T.J, Sayers, J.R, Artymiuk, P.J.
Deposit date:2012-11-26
Release date:2013-07-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:The Structure of E. Coli Exoix - Implications for DNA Binding and Catalysis in Flap Endonucleases
Nucleic Acids Res., 41, 2013
2YP7
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BU of 2yp7 by Molmil
Haemagglutinin of 2005 Human H3N2 Virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Xiong, X, Lin, Y.P, Wharton, S.A, Martin, S.R, Coombs, P.J, Vachieri, S.G, Christodoulou, E, Walker, P.A, Liu, J, Skehel, J.J, Gamblin, S.J, Hay, A.J, Daniels, R.S, McCauley, J.W.
Deposit date:2012-10-29
Release date:2012-11-07
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Evolution of the Receptor Binding Properties of the Influenza A(H3N2) Hemagglutinin.
Proc.Natl.Acad.Sci.USA, 109, 2012
8A46
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BU of 8a46 by Molmil
Crystal structure of the human Kelch domain of Keap1 in complex with compound S217879
Descriptor: 2-[(1S,2R,8S)-2,4,32-trimethyl-28,28-bis(oxidanylidene)-19,22,27-trioxa-28$l^{6}-thia-1,14,15,16-tetrazahexacyclo[21.5.3.1^{3,7}.1^{9,13}.0^{12,16}.0^{26,30}]tritriaconta-3(33),4,6,9(32),10,12,14,23,25,30-decaen-8-yl]ethanoic acid, Kelch-like ECH-associated protein 1
Authors:Weber, C, Vuillard, L, Delerive, P, Miallau, L.
Deposit date:2022-06-10
Release date:2022-07-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.323 Å)
Cite:Selective disruption of NRF2-KEAP1 interaction leads to NASH resolution and reduction of liver fibrosis in mice.
JHEP Rep, 5, 2023
8VXE
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BU of 8vxe by Molmil
Structure of p38 alpha (Mitogen-activated protein kinase 14) complexed with inhibitor 6
Descriptor: (4M)-4-[3-(4-fluorophenyl)-1-methyl-1H-pyrazol-4-yl]-1H-pyrrolo[2,3-b]pyridine, Mitogen-activated protein kinase 14
Authors:Blaesse, M, Steinbacher, S, Shaffer, P.L, Sharma, S, Thompson, A.A.
Deposit date:2024-02-04
Release date:2024-05-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure-Based Optimization of Selective and Brain Penetrant CK1 delta Inhibitors for the Treatment of Circadian Disruptions.
Acs Med.Chem.Lett., 15, 2024
3ZDD
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BU of 3zdd by Molmil
Structure of E. coli ExoIX in complex with the palindromic 5ov6 oligonucleotide and potassium
Descriptor: 1,2-ETHANEDIOL, 5OV6 DNA, ISOPROPYL ALCOHOL, ...
Authors:Flemming, C.S, Hemsworth, G.R, Anstey-Gilbert, C.S, Hodskinson, M.R.G, Zhang, J, Sedelnikova, S.E, Stillman, T.J, Sayers, J.R, Artymiuk, P.J.
Deposit date:2012-11-26
Release date:2013-07-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The structure of Escherichia coli ExoIX--implications for DNA binding and catalysis in flap endonucleases.
Nucleic Acids Res., 41, 2013
7BXH
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BU of 7bxh by Molmil
MavC-Lpg2149 complex
Descriptor: Lpg2149, MavC
Authors:Gao, P, Wang, Y.
Deposit date:2020-04-19
Release date:2020-05-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Insights into catalysis and regulation of non-canonical ubiquitination and deubiquitination by bacterial deamidase effectors.
Nat Commun, 11, 2020
4Z82
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BU of 4z82 by Molmil
Cysteine bound rat cysteine dioxygenase C164S variant at pH 8.1
Descriptor: CYSTEINE, Cysteine dioxygenase type 1, FE (II) ION
Authors:Fellner, M, Tchesnokov, E.P, Siakkou, E, Rutledge, M.T, Kanitz, M, Jameson, G.N.L, Wilbanks, S.M.
Deposit date:2015-04-08
Release date:2016-06-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Influence of cysteine 164 on active site structure in rat cysteine dioxygenase.
J.Biol.Inorg.Chem., 21, 2016
6CE9
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BU of 6ce9 by Molmil
Insulin Receptor ectodomain in complex with two insulin molecules
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Scapin, G, Dandey, V.P, Zhang, Z, Strickland, C, Potter, C.S, Carragher, B.
Deposit date:2018-02-11
Release date:2018-03-14
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure of the insulin receptor-insulin complex by single-particle cryo-EM analysis.
Nature, 556, 2018
3ZVZ
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BU of 3zvz by Molmil
PHD finger of human UHRF1
Descriptor: E3 UBIQUITIN-PROTEIN LIGASE UHRF1, ZINC ION
Authors:Lallous, N, Birck, C, Mc Ewen, A.G, Legrand, P, Samama, J.P.
Deposit date:2011-07-28
Release date:2011-11-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:The Phd Finger of Human Uhrf1 Reveals a New Subgroup of Unmethylated Histone H3 Tail Readers.
Plos One, 6, 2011
4ZAA
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BU of 4zaa by Molmil
Structure of A. niger Fdc1 in complex with 4-vinyl guaiacol
Descriptor: 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-y l)-D-ribitol, 1-deoxy-5-O-phosphono-1-[(10aR)-2,2,3,4-tetramethyl-8,10-dioxo-1,2,8,9,10,10a-hexahydro-6H-indeno[1,7-ef]pyrimido[4,5-b][1,4]diazepin-6-yl]-D-ribitol, 2-Methoxy-4-vinylphenol, ...
Authors:Payne, K.A.P, Leys, D.
Deposit date:2015-04-13
Release date:2015-06-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.242 Å)
Cite:New cofactor supports alpha , beta-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.
Nature, 522, 2015
2CNE
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BU of 2cne by Molmil
Structural Insights into the Design of Nonpeptidic Isothiazolidinone- Containing Inhibitors of Protein Tyrosine Phosphatase 1B
Descriptor: N-({4-[DIFLUORO(PHOSPHONO)METHYL]PHENYL}ACETYL)-L-PHENYLALANYL-4-[DIFLUORO(PHOSPHONO)METHYL]-L-PHENYLALANINAMIDE, SULFATE ION, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1, ...
Authors:Ala, P.J, Gonneville, L, Hillman, M, Becker-Pasha, M, Yue, E.W, Douty, B, Wayland, B, Polam, P, Crawley, M.L, McLaughlin, E, Sparks, R.B, Glass, B, Takvorian, A, Combs, A.P, Burn, T.C, Hollis, G.F, Wynn, R.
Deposit date:2006-05-21
Release date:2006-09-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insights Into the Design of Nonpeptidic Isothiazolidinone-Containing Inhibitors of Protein- Tyrosine Phosphatase 1B.
J.Biol.Chem., 281, 2006
4ZQW
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BU of 4zqw by Molmil
CdiI from Escherichia coli EC869 in complex with a macrocyclic peptide
Descriptor: CHLORIDE ION, Immunity protein CdiI-o11, macrocyclic peptide
Authors:Morse, R.P, Goulding, C.W.
Deposit date:2015-05-11
Release date:2015-10-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Diversification of beta-Augmentation Interactions between CDI Toxin/Immunity Proteins.
J.Mol.Biol., 427, 2015

226414

數據於2024-10-23公開中

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