Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 46375 results

3L5A
DownloadVisualize
BU of 3l5a by Molmil
Crystal structure of a probable NADH-dependent flavin oxidoreductase from Staphylococcus aureus
Descriptor: NADH/flavin oxidoreductase/NADH oxidase, TRIETHYLENE GLYCOL
Authors:Lam, R, Gordon, R.D, Vodsedalek, J, Battaile, K.P, Grebemeskel, S, Lam, K, Romanov, V, Chan, T, Mihajlovic, V, Thompson, C.M, Guthrie, J, Pai, E.F, Chirgadze, N.Y.
Deposit date:2009-12-21
Release date:2010-12-22
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of a probable NADH-dependent flavin oxidoreductase from Staphylococcus aureus
To be Published
3KNG
DownloadVisualize
BU of 3kng by Molmil
Crystal structure of SnoaB, a cofactor-independent oxygenase from Streptomyces nogalater, determined to 1.9 resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ...
Authors:Koskiniemi, H, Grocholski, T, Lindqvist, Y, Mantsala, P, Niemi, J, Schneider, G.
Deposit date:2009-11-12
Release date:2010-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the cofactor-independent monooxygenase SnoaB from Streptomyces nogalater: implications for the reaction mechanism
Biochemistry, 49, 2010
4LYQ
DownloadVisualize
BU of 4lyq by Molmil
Crystal Structure of Glycoside Hydrolase Family 5 Mannosidase from Rhizomucor miehei, E202A mutant
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Exo-beta-1,4-mannosidase, ...
Authors:Jiang, Z.Q, Zhou, P, Yang, S.Q, Liu, Y, Yan, Q.J.
Deposit date:2013-07-31
Release date:2014-08-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into the substrate specificity and transglycosylation activity of a fungal glycoside hydrolase family 5 beta-mannosidase.
Acta Crystallogr.,Sect.D, 70, 2014
3KOU
DownloadVisualize
BU of 3kou by Molmil
Structural insights into the catalytic mechanism of CD38: Evidence for a conformationally flexible covalent enzyme-substrate complex.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CD38 molecule, ...
Authors:Egea, P.F, Muller-Steffner, H, Stroud, R.M, Oppenheimer, N.J, Kellenberger, E, Schuber, F.
Deposit date:2009-11-13
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Insights into the mechanism of bovine CD38/NAD+glycohydrolase from the X-ray structures of its Michaelis complex and covalently-trapped intermediates.
Plos One, 7, 2012
4R7E
DownloadVisualize
BU of 4r7e by Molmil
Structure of Bre1 RING domain
Descriptor: E3 ubiquitin-protein ligase BRE1, ZINC ION
Authors:Kumar, P, Wolberger, C.
Deposit date:2014-08-27
Release date:2015-05-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Structure of the yeast Bre1 RING domain.
Proteins, 83, 2015
6MFB
DownloadVisualize
BU of 6mfb by Molmil
Crystal structure of 3-hydroxykynurenine transaminase from Aedes aegypti
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Serine--pyruvate aminotransferase
Authors:Maciel, L.G, Oliveira, A.A, Romao, T.P, Silva Filha, M.H.N.L, dos Anjos, J.V, Soares, T.A, Guido, R.V.C.
Deposit date:2018-09-10
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of 3-hydroxykynurenine transaminase from Aedes aegypti
To Be Published
6ZUF
DownloadVisualize
BU of 6zuf by Molmil
Urea-based Foldamer Inhibitor chimera C2 in complex with ASF1 Histone chaperone
Descriptor: C2 foldamer/peptide hybrid inhibitor of histone chaperone ASF1, GLYCEROL, Histone chaperone ASF1A, ...
Authors:Bakail, M, Mbianda, J, Perrin, E.M, Guerois, R, Legrand, P, Traore, S, Douat, C, Guichard, G, Ochsenbein, F.
Deposit date:2020-07-22
Release date:2021-06-09
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Optimal anchoring of a foldamer inhibitor of ASF1 histone chaperone through backbone plasticity.
Sci Adv, 7, 2021
6UZV
DownloadVisualize
BU of 6uzv by Molmil
The structure of a red shifted photosystem I complex
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Toporik, H, Williams, D, Chiu, P.L, Mazor, Y.
Deposit date:2019-11-15
Release date:2020-09-16
Last modified:2020-11-04
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The structure of a red-shifted photosystem I reveals a red site in the core antenna.
Nat Commun, 11, 2020
4QM9
DownloadVisualize
BU of 4qm9 by Molmil
Crystal Structure of a Putative Cysteine Dioxygenase From Bacillus subtilis with Cys-bound
Descriptor: CYSTEINE, Cysteine dioxygenase, FE (III) ION
Authors:Hartman, S.H, Driggers, C.M, Karplus, P.A.
Deposit date:2014-06-15
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Arg- and Gln-type bacterial cysteine dioxygenase homologs.
Protein Sci., 24, 2015
4L8F
DownloadVisualize
BU of 4l8f by Molmil
Crystal structure of gamma-glutamyl hydrolase (C108A) complex with MTX
Descriptor: Gamma-glutamyl hydrolase, METHOTREXATE
Authors:Chuankhayan, P, Kao, T.-T, Chen, C.-J, Fu, T.-F.
Deposit date:2013-06-17
Release date:2014-05-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural insights into the hydrolysis and polymorphism of methotrexate polyglutamate by zebrafish gamma-glutamyl hydrolase
J.Med.Chem., 56, 2013
3KVC
DownloadVisualize
BU of 3kvc by Molmil
Crystal structure of bovine RPE65 at 1.9 angstrom resolution
Descriptor: FE (II) ION, Retinoid isomerohydrolase
Authors:Kiser, P.D, Lodowski, D.T, Golczak, M, Palczewski, K.
Deposit date:2009-11-29
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Importance of membrane structural integrity for RPE65 retinoid isomerization activity.
J.Biol.Chem., 285, 2010
3KWL
DownloadVisualize
BU of 3kwl by Molmil
Crystal structure of a hypothetical protein from Helicobacter pylori
Descriptor: uncharacterized protein
Authors:Lam, R, Thompson, C.M, Vodsedalek, J, Lam, K, Romanov, V, Battaile, K.P, Beletskaya, I, Gordon, E, Pai, E.F, Chirgadze, N.Y.
Deposit date:2009-12-01
Release date:2010-12-01
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of a hypothetical protein from Helicobacter pylori
To be Published
7A53
DownloadVisualize
BU of 7a53 by Molmil
Structure of DYRK1A in complex with compound 7
Descriptor: (3~{E})-3-[(5-methylfuran-2-yl)methylidene]-1~{H}-indol-2-one, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-20
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
4LB2
DownloadVisualize
BU of 4lb2 by Molmil
X-ray study of human serum albumin complexed with idarubicin
Descriptor: IDARUBICIN, SERUM ALBUMIN
Authors:Wang, Z, Ho, J.X, Ruble, J, Rose, J.P, Carter, D.C.
Deposit date:2013-06-20
Release date:2013-07-24
Last modified:2014-02-19
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural studies of several clinically important oncology drugs in complex with human serum albumin.
Biochim.Biophys.Acta, 1830, 2013
7A4R
DownloadVisualize
BU of 7a4r by Molmil
Structure of DYRK1A in complex with compound 1
Descriptor: 2-amino-3H,4H,7H-pyrrolo[2,3-d]pyrimidin-4-one, DIMETHYL SULFOXIDE, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-20
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
4LCB
DownloadVisualize
BU of 4lcb by Molmil
Structure of Vps4 homolog from Acidianus hospitalis
Descriptor: CHLORIDE ION, Cell division protein CdvC, Vps4
Authors:Han, H, Hill, C.P, Whitby, F.G, Monroe, N.
Deposit date:2013-06-21
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:The Oligomeric State of the Active Vps4 AAA ATPase.
J.Mol.Biol., 426, 2014
4QNY
DownloadVisualize
BU of 4qny by Molmil
Crystal structure of MapK from Leishmania donovani, LDBPK_331470
Descriptor: GLYCEROL, MAGNESIUM ION, Mitogen activated protein kinase, ...
Authors:Wernimont, A.K, Loppnau, P, Walker, J.R, Mangos, M, El Bakkouri, M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Amani, M, Structural Genomics Consortium (SGC)
Deposit date:2014-06-18
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.257 Å)
Cite:Crystal structure of MapK from Leishmania donovani, LDBPK_331470
TO BE PUBLISHED
6H47
DownloadVisualize
BU of 6h47 by Molmil
Human KRAS in complex with darpin K19
Descriptor: GTPase KRas, SULFATE ION, darpin K19
Authors:Debreczeni, J.E, Bery, N, Legg, S, Breed, J, Embrey, K, Stubbs, C, Kolasinska-Zwierz, P, Barrett, N, Marwood, R, Watson, J, Tart, J, Overman, R, Miller, A, Phillips, C, Minter, R, Rabbitts, T.H.
Deposit date:2018-07-20
Release date:2019-04-24
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:KRAS-specific inhibition using a DARPin binding to a site in the allosteric lobe.
Nat Commun, 10, 2019
1MKR
DownloadVisualize
BU of 1mkr by Molmil
Crystal Structure of a Mutant Variant of Cytochrome c Peroxidase (Plate like crystals)
Descriptor: Cytochrome c Peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bhaskar, B, Immoos, C.E, Shimizu, H, Farmer, P.J, Poulos, T.L.
Deposit date:2002-08-29
Release date:2003-04-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:A Novel Heme and Peroxide-Dependent Tryptophan-Tyrosine Cross-Link in a Mutant of Cytochrome c Peroxidase
J.Mol.Biol., 328, 2003
1LVK
DownloadVisualize
BU of 1lvk by Molmil
X-RAY CRYSTAL STRUCTURE OF THE MG (DOT) 2'(3')-O-(N-METHYLANTHRANILOYL) NUCLEOTIDE BOUND TO DICTYOSTELIUM DISCOIDEUM MYOSIN MOTOR DOMAIN
Descriptor: 2'(3')-O-N-METHYLANTHRANILOYL-ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Bauer, C.B, Kuhlman, P.A, Bagshaw, C.R, Rayment, I.
Deposit date:1997-09-05
Release date:1998-01-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray crystal structure and solution fluorescence characterization of Mg.2'(3')-O-(N-methylanthraniloyl) nucleotides bound to the Dictyostelium discoideum myosin motor domain.
J.Mol.Biol., 274, 1997
7A5D
DownloadVisualize
BU of 7a5d by Molmil
Structure of DYRK1A in complex with compound 16
Descriptor: 4-azanyl-2-methyl-6-pyridin-3-yl-7~{H}-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, CHLORIDE ION, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-21
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
4L7C
DownloadVisualize
BU of 4l7c by Molmil
Structure of keap1 kelch domain with 2-{[(1S)-2-{[(1R,2S)-2-(1H-tetrazol-5-yl)cyclohexyl]carbonyl}-1,2,3,4-tetrahydroisoquinolin-1-yl]methyl}-1H-isoindole-1,3(2H)-dione
Descriptor: 2-{[(1S)-2-{[(1R,2S)-2-(1H-tetrazol-5-yl)cyclohexyl]carbonyl}-1,2,3,4-tetrahydroisoquinolin-1-yl]methyl}-1H-isoindole-1,3(2H)-dione, ACETATE ION, Kelch-like ECH-associated protein 1
Authors:Jnoff, E, Brookfield, F, Albrecht, C, Barker, J.J, Barker, O, Beaumont, E, Bromidge, S, Brooks, M, Ceska, T, Courade, J.P, Crabbe, T, Duclos, S, Fryatt, T, Jigorel, E, Kwong, J, Sands, Z, Smith, M.A.
Deposit date:2013-06-13
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Binding Mode and Structure-Activity Relationships around Direct Inhibitors of the Nrf2-Keap1 Complex.
Chemmedchem, 9, 2014
7A51
DownloadVisualize
BU of 7a51 by Molmil
Structure of DYRK1A in complex with compound 5
Descriptor: 4-azanyl-6-bromanyl-7-methyl-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-20
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
1MAI
DownloadVisualize
BU of 1mai by Molmil
STRUCTURE OF THE PLECKSTRIN HOMOLOGY DOMAIN FROM PHOSPHOLIPASE C DELTA IN COMPLEX WITH INOSITOL TRISPHOSPHATE
Descriptor: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, PHOSPHOLIPASE C DELTA-1
Authors:Ferguson, K.M, Lemmon, M.A, Schlessinger, J, Sigler, P.B.
Deposit date:1996-05-23
Release date:1996-11-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the high affinity complex of inositol trisphosphate with a phospholipase C pleckstrin homology domain.
Cell(Cambridge,Mass.), 83, 1995
6H5D
DownloadVisualize
BU of 6h5d by Molmil
Crystal structure of DHQ1 from Salmonella typhi covalently modified by ligand 2
Descriptor: (1~{S},3~{S},4~{R},5~{R})-3-methyl-1,4,5-tris(hydroxyl)cyclohexane-1-carboxylic acid, 3-dehydroquinate dehydratase
Authors:Sanz-Gaitero, M, Maneiro, M, Lence, E, Otero, J.M, Thompson, P, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2018-07-24
Release date:2019-07-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Hydroxylammonium Derivatives for Selective Active-site Lysine Modification in the Anti-virulence Bacterial Target DHQ1 Enzyme.
Org Chem Front, 9, 2019

226262

數據於2024-10-16公開中

PDB statisticsPDBj update infoContact PDBjnumon