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PDB: 45855 results

4WL7
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Room-temperature crystal structure of lysozyme determined by serial synchrotron crystallography using a micro focused beam (Conventional resolution cut-off)
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Coquelle, N, Brewster, A.S, Kapp, U, Shilova, A, Weinhausen, B, Burghammer, M, Colletier, J.P.
Deposit date:2014-10-06
Release date:2015-05-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Raster-scanning serial protein crystallography using micro- and nano-focused synchrotron beams.
Acta Crystallogr.,Sect.D, 71, 2015
7Q7Q
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BU of 7q7q by Molmil
LIPIDIC CUBIC PHASE SERIAL FEMTOSECOND CRYSTALLOGRAPHY STRUCTURE OF A PHOTOSYNTHETIC REACTION CENTRE
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL B, ...
Authors:Baath, P, Banacore, A, Neutze, R.
Deposit date:2021-11-09
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Lipidic cubic phase serial femtosecond crystallography structure of a photosynthetic reaction centre.
Acta Crystallogr D Struct Biol, 78, 2022
7Q7P
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LIPIDIC CUBIC PHASE SERIAL FEMTOSECOND CRYSTALLOGRAPHY STRUCTURE OF A PHOTOSYNTHETIC REACTION CENTRE
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL B, ...
Authors:Baath, P, Banacore, A, Neutze, R.
Deposit date:2021-11-09
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Lipidic cubic phase serial femtosecond crystallography structure of a photosynthetic reaction centre.
Acta Crystallogr D Struct Biol, 78, 2022
8DC2
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BU of 8dc2 by Molmil
Cryo-EM structure of CasLambda (Cas12l) bound to crRNA and DNA
Descriptor: CasLambda, DNA NTS, DNA TS, ...
Authors:Al-Shayeb, B, Skopintsev, P, Soczek, K, Doudna, J.
Deposit date:2022-06-15
Release date:2022-12-14
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Diverse virus-encoded CRISPR-Cas systems include streamlined genome editors.
Cell, 185, 2022
4WQL
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BU of 4wql by Molmil
Crystal structure of aminoglycoside nucleotidylyltransferase ANT(2")-Ia, kanamycin-bound
Descriptor: 2''-aminoglycoside nucleotidyltransferase, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Cox, G, Stogios, P.J, Savchenko, A, Wright, G.D, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-10-22
Release date:2014-11-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural and Molecular Basis for Resistance to Aminoglycoside Antibiotics by the Adenylyltransferase ANT(2)-Ia.
Mbio, 6, 2015
8RBX
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BU of 8rbx by Molmil
Structure of Integrator-PP2A bound to a paused RNA polymerase II-DSIF-NELF-nucleosome complex
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Fianu, I, Ochmann, M, Walshe, J.L, Cramer, P.
Deposit date:2023-12-05
Release date:2024-02-07
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis of Integrator-dependent RNA polymerase II termination.
Nature, 629, 2024
4WT3
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The N-terminal domain of Rubisco Accumulation Factor 1 from Arabidopsis thaliana
Descriptor: Rubisco Accumulation Factor 1, isoform 2
Authors:Hauser, T, Bhat, J.Y, Milicic, G, Wendler, P, Hartl, F.U, Bracher, A, Hayer-Hartl, M.
Deposit date:2014-10-29
Release date:2015-07-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Structure and mechanism of the Rubisco-assembly chaperone Raf1.
Nat.Struct.Mol.Biol., 22, 2015
4WT4
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The C-terminal domain of Rubisco Accumulation Factor 1 from Arabidopsis thaliana, crystal form I
Descriptor: PHOSPHATE ION, Rubisco Accumulation Factor 1, isoform 2
Authors:Hauser, T, Bhat, J.Y, Milicic, G, Wendler, P, Hartl, F.U, Bracher, A, Hayer-Hartl, M.
Deposit date:2014-10-29
Release date:2015-07-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structure and mechanism of the Rubisco-assembly chaperone Raf1.
Nat.Struct.Mol.Biol., 22, 2015
4WT5
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BU of 4wt5 by Molmil
The C-terminal domain of Rubisco Accumulation Factor 1 from Arabidopsis thaliana, crystal form II
Descriptor: Rubisco Accumulation Factor 1, isoform 2
Authors:Hauser, T, Bhat, J.Y, Milicic, G, Wendler, P, Hartl, F.U, Bracher, A, Hayer-Hartl, M.
Deposit date:2014-10-29
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.568 Å)
Cite:Structure and mechanism of the Rubisco-assembly chaperone Raf1.
Nat.Struct.Mol.Biol., 22, 2015
8FTJ
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BU of 8ftj by Molmil
Crystal structure of human NEIL1 (P2G (242K) C(delta)100) glycosylase bound to DNA duplex containing urea
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*TP*CP*CP*AP*UDV*GP*TP*CP*TP*AP*CP)-3'), DNA (5'-D(*TP*AP*GP*AP*CP*AP*TP*GP*GP*AP*CP*GP*G)-3'), ...
Authors:Tomar, R, Sharma, P, Harp, J.M, Egli, M, Stone, M.P.
Deposit date:2023-01-12
Release date:2023-04-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Base excision repair of the N-(2-deoxy-d-erythro-pentofuranosyl)-urea lesion by the hNEIL1 glycosylase.
Nucleic Acids Res., 51, 2023
4X6J
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BU of 4x6j by Molmil
Development of N-(Functionalized benzoyl)-homocycloleucyl-glycinonitriles as Potent Cathepsin K Inhibitors.
Descriptor: 2-amino-4-chloro-N-(1-{[(2E)-2-iminoethyl]carbamoyl}cyclohexyl)benzamide, CHLORIDE ION, Cathepsin K, ...
Authors:Borisek, J, Mohar, B, Vizovisek, M, Sosnowski, P, Turk, D, Turk, B, Novic, M.
Deposit date:2014-12-08
Release date:2015-09-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Development of N-(Functionalized benzoyl)-homocycloleucyl-glycinonitriles as Potent Cathepsin K Inhibitors.
J.Med.Chem., 58, 2015
4WGL
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BU of 4wgl by Molmil
Crystal structure of a GroEL D83A/R197A double mutant
Descriptor: 60 kDa chaperonin
Authors:Yang, D, Fei, X, LaRonde, N.A, Beckett, D, Lund, P.A, Lorimer, G.H.
Deposit date:2014-09-19
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:Crystal structure of a GroEL D83A/R197A double mutant
To Be Published
4X2K
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BU of 4x2k by Molmil
Selection of fragments for kinase inhibitor design: decoration is key
Descriptor: 4-[(3-aminophenyl)amino]pyrido[2,3-d]pyrimidin-5(6H)-one, SULFATE ION, TGF-beta receptor type-1
Authors:Czodrowski, P, Hoelzemann, G, Barnickel, G, Greiner, H, Musil, D.
Deposit date:2014-11-26
Release date:2014-12-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Selection of fragments for kinase inhibitor design: decoration is key.
J.Med.Chem., 58, 2015
4WLQ
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BU of 4wlq by Molmil
Crystal structure of mUCH37-hRPN13 CTD complex
Descriptor: Proteasomal ubiquitin receptor ADRM1, Ubiquitin carboxyl-terminal hydrolase isozyme L5
Authors:Hemmis, C.W, Hill, C.P, VanderLinden, R, Whitby, F.G.
Deposit date:2014-10-07
Release date:2015-03-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural Basis for the Activation and Inhibition of the UCH37 Deubiquitylase.
Mol.Cell, 57, 2015
8CYM
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BU of 8cym by Molmil
[2T7+9bp Linker] Self-Assembled 3D DNA Hexagonal Tensegrity Triangle with 9 bp Sticky-End Linker
Descriptor: DNA (5'-D(*AP*CP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*C)-3'), DNA (5'-D(*GP*AP*TP*GP*CP*GP*AP*GP*T)-3'), DNA (5'-D(*GP*TP*AP*CP*TP*CP*GP*CP*A)-3'), ...
Authors:Lu, B, Vecchioni, S, Ohayon, Y.P, Seeman, N.C, Mao, C, Sha, R.
Deposit date:2022-05-24
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (7.76 Å)
Cite:Programmable 3D Hexagonal Geometry of DNA Tensegrity Triangles.
Angew.Chem.Int.Ed.Engl., 62, 2023
8DAG
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BU of 8dag by Molmil
[8 bp center] Self-Assembled 3D DNA Hexagonal Tensegrity Triangle
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*TP*GP*TP*GP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*TP*GP*T)-3'), DNA (5'-D(P*CP*CP*GP*TP*CP*AP*CP*A)-3'), ...
Authors:Lu, B, Vecchioni, S, Ohayon, Y.P, Seeman, N.C, Mao, C, Sha, R.
Deposit date:2022-06-13
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (6.16 Å)
Cite:Programmable 3D Hexagonal Geometry of DNA Tensegrity Triangles.
Angew.Chem.Int.Ed.Engl., 62, 2023
8DAH
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BU of 8dah by Molmil
[20 bp edge] Self-Assembled 3D DNA Hexagonal Tensegrity Triangle
Descriptor: DNA (5'-D(*CP*TP*GP*AP*TP*GP*T)-3'), DNA (5'-D(*GP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*GP*TP*AP*CP*A)-3'), ...
Authors:Lu, B, Vecchioni, S, Ohayon, Y.P, Seeman, N.C, Mao, C, Sha, R.
Deposit date:2022-06-13
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (5.47 Å)
Cite:Programmable 3D Hexagonal Geometry of DNA Tensegrity Triangles.
Angew.Chem.Int.Ed.Engl., 62, 2023
8D4A
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BU of 8d4a by Molmil
Cas12a2 quaternary complex
Descriptor: DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), MAGNESIUM ION, ...
Authors:Bravo, J.P.K, Taylor, D.W.
Deposit date:2022-06-01
Release date:2023-01-18
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:RNA targeting unleashes indiscriminate nuclease activity of CRISPR-Cas12a2.
Nature, 613, 2023
4WRD
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BU of 4wrd by Molmil
Crystal structure of Staphylcoccal nulease variant Delta+PHS V66E L125E at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Bell-Upp, P.C, Schlessman, J.L, Garcia-Moreno E, B.
Deposit date:2014-10-23
Release date:2015-07-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of Staphylcoccal nulease variant Delta+PHS V66E L125E at cryogenic temperature
to be published
4WVY
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BU of 4wvy by Molmil
Double-heterohexameric rings of full-length Rvb1(ATP)/Rvb2(apo)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, RuvB-like 1, RuvB-like 2
Authors:Hopfner, K.-P, Lakomek, K.
Deposit date:2014-11-08
Release date:2015-02-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:Structural Basis for Dodecameric Assembly States and Conformational Plasticity of the Full-Length AAA+ ATPases Rvb1Rvb2.
Structure, 23, 2015
4WZ3
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BU of 4wz3 by Molmil
Crystal structure of the complex between LubX/LegU2/Lpp2887 U-box 1 and Homo sapiens UBE2D2
Descriptor: E3 ubiquitin-protein ligase LubX, Ubiquitin-conjugating enzyme E2 D2
Authors:Stogios, P.J, Quaile, A.T, Skarina, T, Nocek, B, Di Leo, R, Yim, V, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-11-18
Release date:2015-01-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular Characterization of LubX: Functional Divergence of the U-Box Fold by Legionella pneumophila.
Structure, 23, 2015
7QIZ
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BU of 7qiz by Molmil
Specific features and methylation sites of a plant 80S ribosome
Descriptor: 1,4-DIAMINOBUTANE, 18S, 25S rRNA, ...
Authors:Cottilli, P, Itoh, Y, Amunts, A.
Deposit date:2021-12-16
Release date:2022-08-03
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.38 Å)
Cite:Cryo-EM structure and rRNA modification sites of a plant ribosome.
Plant Commun., 3, 2022
4WZI
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BU of 4wzi by Molmil
Crystal structure of crosslink stabilized long-form PDE4B
Descriptor: IODIDE ION, MAGNESIUM ION, SODIUM ION, ...
Authors:Cedervall, P, Pandit, J.
Deposit date:2014-11-19
Release date:2015-03-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Engineered stabilization and structural analysis of the autoinhibited conformation of PDE4.
Proc.Natl.Acad.Sci.USA, 112, 2015
9BCM
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BU of 9bcm by Molmil
Crystal structure of the glycosyltransferase UGT95A1
Descriptor: Glycosyltransferase
Authors:Pereira, J.H, Sirirungruang, S, Shih, P.M, Adams, P.D.
Deposit date:2024-04-09
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural and biochemical basis for regiospecificity of the flavonoid glycosyltransferase UGT95A1.
J.Biol.Chem., 2024
8FW7
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BU of 8fw7 by Molmil
Histone from Bdellovibrio bacteriovorus bound to dsDNA
Descriptor: CBFD_NFYB_HMF domain-containing protein, DNA (5'-D(P*AP*T)-3'), DNA (5'-D(P*CP*AP*T)-3')
Authors:Laursen, S.P, Luger, K.
Deposit date:2023-01-20
Release date:2023-08-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Histones with an unconventional DNA-binding mode in vitro are major chromatin constituents in the bacterium Bdellovibrio bacteriovorus.
Nat Microbiol, 8, 2023

223532

数据于2024-08-07公开中

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