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PDB: 46375 件

3VHP
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The insertion mutant Y61GG of Tm Cel12A
分子名称: Endo-1,4-beta-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Cheng, Y.-S, Ko, T.-P, Guo, R.-T, Liu, J.-R.
登録日2011-08-30
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Enhanced activity of Thermotoga maritima cellulase 12A by mutating a unique surface loop
Appl.Microbiol.Biotechnol., 95, 2012
8C3C
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BU of 8c3c by Molmil
14-3-3 sigma with Pin1 binding site pS72 and bound Fusicoccin A
分子名称: 14-3-3 protein sigma, FUSICOCCIN, MAGNESIUM ION, ...
著者Verhoef, C.J, Cossar, P.
登録日2022-12-23
公開日2023-06-14
最終更新日2023-07-05
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Tracking the mechanism of covalent molecular glue stabilization using native mass spectrometry.
Chem Sci, 14, 2023
6DR8
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BU of 6dr8 by Molmil
Metallo-beta-lactamase from Cronobacter sakazakii (Enterobacter sakazakii) HARLDQ motif mutant S60/R118H/Q121H/K254H
分子名称: (2-hydroxyethoxy)acetaldehyde, Beta-lactamase, PHOSPHATE ION, ...
著者Monteiro Pedroso, M, Waite, D, Natasa, M, McGeary, R, Guddat, L, Hugenholtz, P, Schenk, G.
登録日2018-06-11
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.476 Å)
主引用文献Broad spectrum antibiotic-degrading metallo-beta-lactamases are phylogenetically diverse
Protein Cell, 2020
8CO6
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BU of 8co6 by Molmil
Subtomogram average of Immature Rotavirus TLP penton
分子名称: Inner capsid protein VP2, Intermediate capsid protein VP6, Outer capsid glycoprotein VP7, ...
著者Shah, P.N.M, Stuart, D.I.
登録日2023-02-27
公開日2023-05-10
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Characterization of the rotavirus assembly pathway in situ using cryoelectron tomography.
Cell Host Microbe, 31, 2023
6DRJ
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BU of 6drj by Molmil
Structure of TRPM2 ion channel receptor by single particle electron cryo-microscopy, ADPR/Ca2+ bound state
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, CALCIUM ION, Transient receptor potential cation channel, ...
著者Du, J, Lu, W, Huang, Y, Winkler, P, Sun, W.
登録日2018-06-12
公開日2018-09-19
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Architecture of the TRPM2 channel and its activation mechanism by ADP-ribose and calcium.
Nature, 562, 2018
3QGV
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Crystal structure of a thermostable amylase variant
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha amylase, CALCIUM ION, ...
著者Hein, K.L, Ganshaw, G, Bott, R, Nissen, P.
登録日2011-01-25
公開日2012-02-01
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of a highly mutated, thermostable xCExB1-amylase variant
To be Published
2ME0
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BU of 2me0 by Molmil
NMR Structure of the homeodomain transcription factor Gbx1 from Homo sapiens solved in the presence of the DNA sequence CGACTAATTAGTCG
分子名称: Homeobox protein GBX-1
著者Proudfoot, A, Serrano, P, Geralt, M, Wuthrich, K, Joint Center for Structural Genomics (JCSG), Partnership for Stem Cell Biology (STEMCELL)
登録日2013-09-20
公開日2013-10-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR Structure of the homeodomain transcription factor Gbx1 from Homo sapiens solved in the presence of the DNA sequence CGACTAATTAGTCG
To be Published
1OKB
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BU of 1okb by Molmil
crystal structure of Uracil-DNA glycosylase from Atlantic cod (Gadus morhua)
分子名称: CHLORIDE ION, GLYCEROL, URACIL-DNA GLYCOSYLASE
著者Leiros, I, Moe, E, Lanes, O, Smalas, A.O, Willassen, N.P.
登録日2003-07-21
公開日2004-04-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Crystal Structure of Uracil-DNA Glycosylase from Atlantic Cod (Gadus Morhua) Reveals Cold-Adaptation Features
Acta Crystallogr.,Sect.D, 59, 2003
7T4D
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BU of 7t4d by Molmil
Pore structure of pore-forming toxin Epx4
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Epx4
著者Xiong, X.Z, Dong, M, Yang, P, Abraham, J.
登録日2021-12-09
公開日2022-03-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Emerging enterococcus pore-forming toxins with MHC/HLA-I as receptors.
Cell, 185, 2022
3VNI
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Crystal structures of D-Psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars
分子名称: MANGANESE (II) ION, Xylose isomerase domain protein TIM barrel
著者Chan, H.C, Zhu, Y, Hu, Y, Ko, T.P, Huang, C.H, Ren, F, Chen, C.C, Guo, R.T, Sun, Y.
登録日2012-01-16
公開日2012-08-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Crystal structures of D-psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars.
Protein Cell, 3, 2012
1OPP
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BU of 1opp by Molmil
PEPTIDE OF HUMAN APOLIPOPROTEIN C-I RESIDUES 1-38, NMR, 28 STRUCTURES
分子名称: APOLIPOPROTEIN C-I
著者Rozek, A, Buchko, G.W, Kanda, P, Cushley, R.J.
登録日1997-05-08
公開日1998-05-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Conformational studies of the N-terminal lipid-associating domain of human apolipoprotein C-I by CD and 1H NMR spectroscopy.
Protein Sci., 6, 1997
7T4S
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BU of 7t4s by Molmil
CryoEM structure of the HCMV Pentamer gH/gL/UL128/UL130/UL131A in complex with NRP2 and neutralizing fabs 8I21 and 13H11
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Envelope glycoprotein H, ...
著者Kschonsak, M, Johnson, M.C, Schelling, R, Green, E.M, Rouge, L, Ho, H, Patel, N, Kilic, C, Kraft, E, Arthur, C.P, Rohou, A.L, Comps-Agrar, L, Martinez-Martin, N, Perez, L, Payandeh, J, Ciferri, C.
登録日2021-12-10
公開日2022-03-23
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for HCMV Pentamer receptor recognition and antibody neutralization.
Sci Adv, 8, 2022
7T4Q
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CryoEM structure of the HCMV Pentamer gH/gL/UL128/UL130/UL131A in complex with neutralizing fabs 2C12, 7I13 and 13H11
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein H, Envelope glycoprotein L, ...
著者Kschonsak, M, Johnson, M.C, Schelling, R, Green, E.M, Rouge, L, Ho, H, Patel, N, Kilic, C, Kraft, E, Arthur, C.P, Rohou, A.L, Comps-Agrar, L, Martinez-Martin, N, Perez, L, Payandeh, J, Ciferri, C.
登録日2021-12-10
公開日2022-03-23
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis for HCMV Pentamer receptor recognition and antibody neutralization.
Sci Adv, 8, 2022
1P4I
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BU of 1p4i by Molmil
Crystal Structure of scFv against peptide GCN4
分子名称: ANTIBODY VARIABLE LIGHT CHAIN, antibody variable heavy chain
著者Zahnd, C, Spinelli, S, Luginbuhl, B, Jermutus, L, Amstutz, P, Cambillau, C, Pluckthun, A.
登録日2003-04-23
公開日2004-05-04
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Directed in Vitro Evolution and Crystallographic Analysis of a Peptide-binding Single Chain Antibody Fragment (scFv) with Low Picomolar Affinity.
J.Biol.Chem., 279, 2004
8CJ2
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BU of 8cj2 by Molmil
Urea-based foldamer inhibitor c3u_5 chimera in complex with ASF1 histone chaperone
分子名称: GLYCEROL, Histone chaperone ASF1A, SULFATE ION, ...
著者Perrin, M.E, Li, B, Mbianda, J, Ropars, V, Legrand, P, Douat, C, Ochsenbein, F, Guichard, G.
登録日2023-02-11
公開日2023-07-05
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.127 Å)
主引用文献Unexpected binding modes of inhibitors to the histone chaperone ASF1 revealed by a foldamer scanning approach.
Chem.Commun.(Camb.), 59, 2023
3VED
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BU of 3ved by Molmil
Rhodococcus jostii RHA1 DypB D153H variant in complex with heme
分子名称: CHLORIDE ION, DypB, GLYCEROL, ...
著者Grigg, J.C, Singh, R, Armstrong, Z, Eltis, L.D, Murphy, M.E.P.
登録日2012-01-07
公開日2012-01-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Distal heme pocket residues of B-type dye-decolorizing peroxidase: arginine but not aspartate is essential for peroxidase activity.
J.Biol.Chem., 287, 2012
7KE8
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BU of 7ke8 by Molmil
SARS-CoV-2 D614G 3 RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-D614G sub-classification)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Gobeil, S, Acharya, P.
登録日2020-10-10
公開日2020-11-04
最終更新日2022-02-02
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献D614G Mutation Alters SARS-CoV-2 Spike Conformation and Enhances Protease Cleavage at the S1/S2 Junction.
Cell Rep, 34, 2021
8CJ1
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BU of 8cj1 by Molmil
Urea-based foldamer inhibitor c3u_3 chimera in complex with ASF1 histone chaperone
分子名称: Histone chaperone ASF1A, c3u_3 chimera inhibitor of histone chaperone ASF1
著者Perrin, M.E, Li, B, Mbianda, J, Ropars, V, Legrand, P, Douat, C, Ochsenbein, F, Guichard, G.
登録日2023-02-11
公開日2023-07-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.564 Å)
主引用文献Unexpected binding modes of inhibitors to the histone chaperone ASF1 revealed by a foldamer scanning approach.
Chem.Commun.(Camb.), 59, 2023
6NZG
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BU of 6nzg by Molmil
Bacteroides uniformis beta-glucuronidase 2 covalently bound to cyclophellitol-6-carboxylate aziridine
分子名称: (1S,2R,3S,4S,5S,6R)-2-amino-3,4,5,6-tetrahydroxycyclohexane-1-carboxylic acid, Beta-galactosidase, CALCIUM ION, ...
著者Pellock, S.J, Jariwala, P.B, Redinbo, M.R.
登録日2019-02-13
公開日2019-12-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Discovering the Microbial Enzymes Driving Drug Toxicity with Activity-Based Protein Profiling.
Acs Chem.Biol., 15, 2020
3QP4
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BU of 3qp4 by Molmil
Crystal structure of CviR ligand-binding domain bound to C10-HSL
分子名称: CviR transcriptional regulator, N-[(3S)-2-oxotetrahydrofuran-3-yl]decanamide
著者Chen, G, Swem, L, Swem, D, Stauff, D, O'Loughlin, C, Jeffrey, P, Bassler, B, Hughson, F.
登録日2011-02-11
公開日2011-03-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A strategy for antagonizing quorum sensing.
Mol.Cell, 42, 2011
6NDB
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BU of 6ndb by Molmil
RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN AND COBALT
分子名称: AMMONIUM ION, CHLORIDE ION, COBALT (II) ION, ...
著者Stetefeld, J, McDougall, M.D, Loewen, P.C.
登録日2018-12-13
公開日2019-01-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN AND COBALT
To be published
6NDH
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RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN AND ZINC
分子名称: AMMONIUM ION, CHLORIDE ION, Integrin alpha-2, ...
著者Stetefeld, J, McDougall, M.D, Loewen, P.C.
登録日2018-12-13
公開日2019-01-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN WITH ZINC BOUND
To be published
7TF4
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Cryo-EM structure of SARS-CoV-2 Kappa (B.1.617.1) spike protein (focused refinement of RBD)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Zhu, X, Saville, J.W, Mannar, D, Srivastava, S.S, Berezuk, A.M, Demers, J.P, Zhou, S, Tuttle, K.S, Subramaniam, S.
登録日2022-01-06
公開日2022-03-30
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Structural and biochemical rationale for enhanced spike protein fitness in delta and kappa SARS-CoV-2 variants.
Nat Commun, 13, 2022
1P9K
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BU of 1p9k by Molmil
THE SOLUTION STRUCTURE OF YBCJ FROM E. COLI REVEALS A RECENTLY DISCOVERED ALFAL MOTIF INVOLVED IN RNA-BINDING
分子名称: orf, hypothetical protein
著者Volpon, L, Lievre, C, Osborne, M.J, Gandhi, S, Iannuzzi, P, Larocque, R, Matte, A, Cygler, M, Gehring, K, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2003-05-12
公開日2003-11-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The solution structure of YbcJ from Escherichia coli reveals a recently discovered alphaL motif involved in RNA binding.
J.Bacteriol., 185, 2003
6YQ3
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Promiscuous Reductase LugOII Catalyzes Keto-reduction at C1 during Lugdunomycin Biosynthesis
分子名称: (3~{R})-8-methoxy-3-methyl-3,6-bis(oxidanyl)-2,4-dihydrobenzo[a]anthracene-1,7,12-trione, 1,2-ETHANEDIOL, Monooxygenase, ...
著者Xiao, X, Elsayed, S.S, Wu, C, van der Heul, H, Prota, A, Huang, J, Guo, R, Abrahams, J.P, van Wezel, G.P.
登録日2020-04-16
公開日2020-09-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Functional and Structural Insights into a Novel Promiscuous Ketoreductase of the Lugdunomycin Biosynthetic Pathway.
Acs Chem.Biol., 15, 2020

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