Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45788 件

8RNY
DownloadVisualize
BU of 8rny by Molmil
Hen Egg White Lysozyme soaked with with [H2Ind][trans-RuCl4(DMSO)(HInd)]
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
著者Oszajca, M, Flejszar, M, Szura, A, Drozdz, P, Brindell, M, Kurpiewska, K.
登録日2024-01-11
公開日2024-02-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Exploring the coordination chemistry of ruthenium complexes with lysozymes: structural and in-solution studies.
Front Chem, 12, 2024
8AT0
DownloadVisualize
BU of 8at0 by Molmil
PotF with mutation D247K
分子名称: (2R)-1-methoxypropan-2-amine, (2~{S})-1-(2-methoxyethoxy)propan-2-amine, 1,2-ETHANEDIOL, ...
著者Kroeger, P, Shanmugaratnam, S, Hocker, B.
登録日2022-08-22
公開日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A fluorescent biosensor for the visualization of Agmatine
To Be Published
8ASZ
DownloadVisualize
BU of 8asz by Molmil
PotF with mutations S87Y and A182D in complex with Agmatine
分子名称: 1,2-ETHANEDIOL, AGMATINE, CALCIUM ION, ...
著者Kroeger, P, Shanmugaratnam, S, Hocker, B.
登録日2022-08-22
公開日2024-03-06
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献A fluorescent biosensor for the visualization of Agmatine
To Be Published
2PVT
DownloadVisualize
BU of 2pvt by Molmil
Crystal structure of a new isoform of phospholipase A2 from russells viper at 2.1 A resolution
分子名称: phospholipase A2
著者Kumar, S, Singh, N, Sharma, S, Kaur, P, Singh, T.P.
登録日2007-05-10
公開日2007-05-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a new isoform of phospholipase A2 from russells viper at 2.1 A resolution
To be Published
3T1E
DownloadVisualize
BU of 3t1e by Molmil
The structure of the Newcastle disease virus hemagglutinin-neuraminidase (HN) ectodomain reveals a 4-helix bundle stalk
分子名称: Hemagglutinin-neuraminidase
著者Yuan, P, Swanson, K, Leser, G.P, Paterson, R.G, Lamb, R.A, Jardetzky, T.S.
登録日2011-07-21
公開日2011-09-07
最終更新日2011-09-21
実験手法X-RAY DIFFRACTION (3.301 Å)
主引用文献Structure of the Newcastle disease virus hemagglutinin-neuraminidase (HN) ectodomain reveals a four-helix bundle stalk.
Proc.Natl.Acad.Sci.USA, 108, 2011
3TCI
DownloadVisualize
BU of 3tci by Molmil
Crystal structure of the decameric sequence d(CGGGCGCCCG) as Z type duplex
分子名称: DNA (5'-D(P*CP*GP*GP*GP*CP*GP*CP*CP*CP*G)-3')
著者Venkadesh, S, Mandal, P.K, Gautham, N.
登録日2011-08-09
公開日2011-10-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.421 Å)
主引用文献Crystal structure of the decameric sequence d(CGGGCGCCCG) as Z type duplex
To be Published
8S0U
DownloadVisualize
BU of 8s0u by Molmil
Structure of the LytM domain of PrgK from E. faecalis
分子名称: PrgK
著者Sun, W.-S, Berntsson, R.P.-A.
登録日2024-02-14
公開日2024-02-28
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Breaking barriers: pCF10 type 4 secretion system relies on a self-regulating muramidase to modulate the cell wall.
Mbio, 2024
4EXL
DownloadVisualize
BU of 4exl by Molmil
Crystal structure of phosphate ABC transporter, periplasmic phosphate-binding protein PstS 1 (PBP1) from Streptococcus pneumoniae Canada MDR_19A
分子名称: CHLORIDE ION, MAGNESIUM ION, Phosphate-binding protein pstS 1
著者Stogios, P.J, Wawrzak, Z, Kudritska, M, Minasov, G, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-04-30
公開日2012-05-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of phosphate ABC transporter, periplasmic phosphate-binding protein PstS 1 (PBP1) from Streptococcus pneumoniae Canada MDR_19A
To be Published
8B8D
DownloadVisualize
BU of 8b8d by Molmil
multimerization domain of Gaboon Viper Virus 1
分子名称: Phosphoprotein
著者Tarbouriech, N, Legrand, P, Bouhris, J.M, Horie, M, Tomonaga, K, Crepin, T.
登録日2022-10-04
公開日2022-11-23
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Borna Disease Virus 1 Phosphoprotein Forms a Tetramer and Interacts with Host Factors Involved in DNA Double-Strand Break Repair and mRNA Processing.
Viruses, 14, 2022
2Q71
DownloadVisualize
BU of 2q71 by Molmil
Uroporphyrinogen Decarboxylase G168R single mutant enzyme in complex with coproporphyrinogen-III
分子名称: COPROPORPHYRINOGEN III, Uroporphyrinogen decarboxylase
著者Phillips, J.D, Whitby, F.G, Stadtmueller, B.M, Edwards, C.Q, Hill, C.P, Kushner, J.P.
登録日2007-06-05
公開日2007-06-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Two Novel Uropophyrinogen Decarboxylase (URO-D) Mutations Causing Hepatoerythropoietic Porphyria (HEP)
Transl.Res., 149, 2007
2PJR
DownloadVisualize
BU of 2pjr by Molmil
HELICASE PRODUCT COMPLEX
分子名称: DNA (5'-D(*AP*CP*TP*GP*C)-3'), DNA (5'-D(*GP*C)-3'), DNA (5'-D(*TP*TP*TP*TP*T)-3'), ...
著者Velankar, S.S, Soultanas, P, Dillingham, M.S, Subramanya, H.S, Wigley, D.B.
登録日1999-03-12
公開日1999-04-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism.
Cell(Cambridge,Mass.), 97, 1999
2PO7
DownloadVisualize
BU of 2po7 by Molmil
Crystal structure of human ferrochelatase mutant with His 341 replaced by Cys
分子名称: CHOLIC ACID, FE2/S2 (INORGANIC) CLUSTER, Ferrochelatase, ...
著者Dailey, H.A, Wu, C.-K, Horanyi, P, Medlock, A.E, Najahi-Missaoui, W, Burden, A, Dailey, T.A, Rose, J.P.
登録日2007-04-25
公開日2007-10-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Altered orientation of active site residues in variants of human ferrochelatase. Evidence for a hydrogen bond network involved in catalysis.
Biochemistry, 46, 2007
4EE3
DownloadVisualize
BU of 4ee3 by Molmil
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with pentasaccharide
分子名称: 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE, Beta-1,4-galactosyltransferase 1, GLYCEROL, ...
著者Ramakrishnan, B, Qasba, P.K.
登録日2012-03-28
公開日2012-07-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Binding of N-acetylglucosamine (GlcNAc) beta 1-6-branched oligosaccharide acceptors to beta 4-galactosyltransferase I reveals a new ligand binding mode.
J.Biol.Chem., 287, 2012
2PX1
DownloadVisualize
BU of 2px1 by Molmil
crystal structure of the complex of bovine lactoferrin C-lobe with Ribose at 2.5 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
著者Mir, R, Vikram, G, Sinha, M, Sharma, S, Kaur, P, Singh, T.P.
登録日2007-05-14
公開日2007-05-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献crystal structure of the complex of bovine lactoferrin C-lobe with Ribose at 2.5 A resolution
To be Published
3T6A
DownloadVisualize
BU of 3t6a by Molmil
Structure of the C-terminal domain of BCAR3
分子名称: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, Breast cancer anti-estrogen resistance protein 3, UNKNOWN ATOM OR ION
著者Mace, P.D, Robinson, H, Riedl, S.J.
登録日2011-07-28
公開日2011-11-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献NSP-Cas protein structures reveal a promiscuous interaction module in cell signaling.
Nat.Struct.Mol.Biol., 18, 2011
3T77
DownloadVisualize
BU of 3t77 by Molmil
S25-2- A(2-4)KDO disaccharide complex
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, MAGNESIUM ION, S25-2 FAB (IGG1K) heavy chain, ...
著者Nguyen, H.P, Seto, N.O, Mackenzie, C.R, Brade, L, Kosma, P, Brade, H, Evans, S.V.
登録日2011-07-29
公開日2011-08-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.739 Å)
主引用文献Germline antibody recognition of distinct carbohydrate epitopes.
Nat.Struct.Biol., 10, 2003
2Q5U
DownloadVisualize
BU of 2q5u by Molmil
Crystal structure of IQN17
分子名称: CHLORIDE ION, Fusion protein between yeast variant GCN4 and HIVgp41
著者Malashkevich, V.N, Eckert, D.M, Hong, L.H, Kim, P.S.
登録日2007-06-01
公開日2007-06-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inhibiting HIV Entry: Discovery of D-Peptide Inhibitors that Target the Gp41 Coiled-Coil Pocket
Cell(Cambridge,Mass.), 99, 1999
6DMH
DownloadVisualize
BU of 6dmh by Molmil
A multiconformer ligand model of acylenzyme intermediate of meropenem bound to an SFC-1 E166A mutant
分子名称: (4R,5S)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-d ihydro-1H-pyrrole-2-carboxylic acid, 1,2-ETHANEDIOL, Beta-lactamase
著者Hudson, B.M, van Zundert, G, Keedy, D.A, Fonseca, R, Heliou, A, Suresh, P, Borrelli, K, Day, T, Fraser, J.S, van den Bedem, H.
登録日2018-06-05
公開日2018-12-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献qFit-ligand Reveals Widespread Conformational Heterogeneity of Drug-Like Molecules in X-Ray Electron Density Maps.
J. Med. Chem., 61, 2018
4EW9
DownloadVisualize
BU of 4ew9 by Molmil
The liganded structure of C. bescii family 3 pectate lyase
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-deoxy-beta-L-threo-hex-4-enopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid, ACETATE ION, ...
著者Alahuhta, P.M, Lunin, V.V.
登録日2012-04-26
公開日2013-03-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The structure and mode of action of Caldicellulosiruptor bescii family 3 pectate lyase in biomass deconstruction.
Acta Crystallogr. D Biol. Crystallogr., 69, 2013
2PRT
DownloadVisualize
BU of 2prt by Molmil
Structure of the Wilms Tumor Suppressor Protein Zinc Finger Domain Bound to DNA
分子名称: DNA (5'-D(*CP*AP*GP*AP*CP*GP*CP*CP*CP*CP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*GP*GP*GP*GP*CP*GP*TP*CP*TP*G)-3'), Wilms tumor 1, ...
著者Stoll, R, Lee, B.M, Debler, E.W, Laity, J.H, Wilson, I.A, Dyson, H.J, Wright, P.E.
登録日2007-05-04
公開日2008-03-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structure of the Wilms tumor suppressor protein zinc finger domain bound to DNA
J.Mol.Biol., 372, 2007
2PTR
DownloadVisualize
BU of 2ptr by Molmil
Crystal structure of Escherichia coli adenylosuccinate lyase mutant H171A with bound adenylosuccinate substrate
分子名称: 2-[9-(3,4-DIHYDROXY-5-PHOSPHONOOXYMETHYL-TETRAHYDRO-FURAN-2-YL)-9H-PURIN-6-YLAMINO]-SUCCINIC ACID, Adenylosuccinate lyase
著者Tsai, M, Howell, P.L.
登録日2007-05-08
公開日2007-07-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Substrate and Product Complexes of Escherichia coli Adenylosuccinate Lyase Provide New Insights into the Enzymatic Mechanism.
J.Mol.Biol., 370, 2007
4EKK
DownloadVisualize
BU of 4ekk by Molmil
Akt1 with AMP-PNP
分子名称: Glycogen synthase kinase-3 beta, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Wu, W.-I, Vigers, G.P.A, Morales, T.H, Brandhuber, B.J.
登録日2012-04-09
公開日2012-05-23
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献An ATP-Site On-Off Switch That Restricts Phosphatase Accessibility of Akt.
Sci.Signal., 5, 2012
4ELM
DownloadVisualize
BU of 4elm by Molmil
Crystal structure of the mouse CD1d-lysosulfatide-Hy19.3 TCR complex
分子名称: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl 3-O-sulfo-beta-D-galactopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Girardi, E, Maricic, I, Wang, J, Mac, T.T, Iyer, P, Kumar, V, Zajonc, D.M.
登録日2012-04-11
公開日2012-07-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.48 Å)
主引用文献Type II natural killer T cells use features of both innate-like and conventional T cells to recognize sulfatide self antigens.
Nat.Immunol., 13, 2012
8BCQ
DownloadVisualize
BU of 8bcq by Molmil
N-terminal domain of Plasmodium berghei glutamyl-tRNA synthetase (native crystal structure)
分子名称: GLYCEROL, Glutamate--tRNA ligase, SULFATE ION
著者Benas, P, Jaramillo Ponce, J.R, Frugier, M, Sauter, C.
登録日2022-10-17
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Solution X-ray scattering highlights discrepancies in Plasmodium multi-aminoacyl-tRNA synthetase complexes.
Protein Sci., 32, 2023
7MF8
DownloadVisualize
BU of 7mf8 by Molmil
Crystal structure of antibody 10E8v4-P100fA Fab in space group P6422
分子名称: Antibody 10E8v4 Fab heavy chain, Antibody 10E8v4 Fab light chain
著者Kwon, Y.D, Kwong, P.D.
登録日2021-04-08
公開日2021-07-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structures of HIV-1 Neutralizing Antibody 10E8 Delineate the Mechanistic Basis of Its Multi-Peak Behavior on Size-Exclusion Chromatography.
Antibodies, 10, 2021

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon