Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 46298 件

8BPE
DownloadVisualize
BU of 8bpe by Molmil
8:1 binding of FcMR on IgM pentameric core
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fas apoptotic inhibitory molecule 3, ...
著者Chen, Q, Rosenthal, P, Tolar, P.
登録日2022-11-16
公開日2023-04-12
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (3.63 Å)
主引用文献Structural basis for Fc receptor recognition of immunoglobulin M.
Nat.Struct.Mol.Biol., 30, 2023
5MMA
DownloadVisualize
BU of 5mma by Molmil
Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI XZ379 (compound 5'g)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'), ...
著者Maskell, D.P, Pye, V.E, Cherepanov, P.
登録日2016-12-09
公開日2017-08-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structure-Guided Optimization of HIV Integrase Strand Transfer Inhibitors.
J. Med. Chem., 60, 2017
7PWY
DownloadVisualize
BU of 7pwy by Molmil
Structure of human dimeric ACMSD in complex with the inhibitor TES-1025
分子名称: 2-[3-[(5-cyano-6-oxidanylidene-4-thiophen-2-yl-1H-pyrimidin-2-yl)sulfanylmethyl]phenyl]ethanoic acid, 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase, POTASSIUM ION, ...
著者Cianci, M, Giacche, N, Carotti, A, Liscio, P, Amici, A, Cialabrini, L, De Franco, F, Pellicciari, R, Raffaelli, N.
登録日2021-10-07
公開日2022-04-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis of Human Dimeric alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase Inhibition With TES-1025.
Front Mol Biosci, 9, 2022
6W6L
DownloadVisualize
BU of 6w6l by Molmil
Cryo-EM structure of the human ribosome-TMCO1 translocon
分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Keenan, R.J, McGilvray, P.T.
登録日2020-03-17
公開日2020-09-02
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献An ER translocon for multi-pass membrane protein biogenesis.
Elife, 9, 2020
6VOM
DownloadVisualize
BU of 6vom by Molmil
Chloroplast ATP synthase (R2, CF1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ...
著者Yang, J.-H, Williams, D, Kandiah, E, Fromme, P, Chiu, P.-L.
登録日2020-01-30
公開日2020-09-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis of redox modulation on chloroplast ATP synthase.
Commun Biol, 3, 2020
6YI7
DownloadVisualize
BU of 6yi7 by Molmil
Structure of cathepsin B1 from Schistosoma mansoni (SmCB1) in complex with an azanitrile inhibitor
分子名称: 1-[(2~{S})-1-[[iminomethyl(methyl)amino]-methyl-amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-3-(phenylmethyl)urea, ACETATE ION, Cathepsin B-like peptidase (C01 family)
著者Jilkova, A, Rezacova, P, Pachl, P, Fanfrlik, J, Rubesova, P, Guetschow, M, Mares, M.
登録日2020-04-01
公開日2020-12-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Azanitrile Inhibitors of the SmCB1 Protease Target Are Lethal to Schistosoma mansoni : Structural and Mechanistic Insights into Chemotype Reactivity.
Acs Infect Dis., 7, 2021
5MQ0
DownloadVisualize
BU of 5mq0 by Molmil
Structure of a spliceosome remodeled for exon ligation
分子名称: 3'-EXON OF UBC4 PRE-MRNA, BOUND BY PRP22 HELICASE, 5'-EXON OF UBC4 PRE-MRNA, ...
著者Fica, S.M, Oubridge, C, Galej, W.P, Wilkinson, M.E, Newman, A.J, Bai, X.-C, Nagai, K.
登録日2016-12-19
公開日2017-01-18
最終更新日2020-10-07
実験手法ELECTRON MICROSCOPY (4.17 Å)
主引用文献Structure of a spliceosome remodelled for exon ligation.
Nature, 542, 2017
7NEE
DownloadVisualize
BU of 7nee by Molmil
Inhibitor Complex with Thrombin Activatable Fibrinolysis inhibitor (TAFIa)
分子名称: (1R,3S)-3-(4-ammoniobutyl)-1-benzyl-1,4-azaphosphinan-1-ium-3-carboxylate 4,4-dioxide, Carboxypeptidase B2, ZINC ION
著者Brown, D.G, Schaffner, A.P, Gloanec, P, Raimbaud, E, Vuillard, L.M.
登録日2021-02-03
公開日2021-04-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Phosphinanes and Azaphosphinanes as Potent and Selective Inhibitors of Activated Thrombin-Activatable Fibrinolysis Inhibitor (TAFIa).
J.Med.Chem., 64, 2021
7PUS
DownloadVisualize
BU of 7pus by Molmil
ERK5 in complex with Pyrrole Carboxamide scaffold
分子名称: 4-[3,6-bis(chloranyl)-2-fluoranyl-phenyl]carbonyl-~{N}-(1-methylpyrazol-4-yl)-1~{H}-pyrrole-2-carboxamide, Mitogen-activated protein kinase 7
著者Tucker, J.A, Martin, M.P, Endicott, J.A, Noble, M.E.N.
登録日2021-09-30
公開日2022-05-11
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Parallel Optimization of Potency and Pharmacokinetics Leading to the Discovery of a Pyrrole Carboxamide ERK5 Kinase Domain Inhibitor.
J.Med.Chem., 65, 2022
7NEU
DownloadVisualize
BU of 7neu by Molmil
Inhibitor Complex with Thrombin Activatable Fibrinolysis Inhibitor (TAFIa)
分子名称: (1R,3S)-3-(4-ammoniobutyl)-1-(4-fluoro-2-(1-methyl-1H-imidazol-5-yl)benzyl)-1,4-azaphosphinan-1-ium-3-carboxylate 4,4-dioxide, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Brown, D.G, Schaffner, A.P, Vuillard, L.M, Gloanec, P, Raimbauld, E.
登録日2021-02-04
公開日2021-04-07
最終更新日2021-04-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Phosphinanes and Azaphosphinanes as Potent and Selective Inhibitors of Activated Thrombin-Activatable Fibrinolysis Inhibitor (TAFIa).
J.Med.Chem., 64, 2021
6PX0
DownloadVisualize
BU of 6px0 by Molmil
Crystal structure of the TPR domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1)
分子名称: 1,2-ETHANEDIOL, Aryl-hydrocarbon-interacting protein-like 1, BETA-MERCAPTOETHANOL, ...
著者Yadav, R.P, Artemyev, N.O.
登録日2019-07-24
公開日2019-09-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Interaction of the tetratricopeptide repeat domain of aryl hydrocarbon receptor-interacting protein-like 1 with the regulatory P gamma subunit of phosphodiesterase 6.
J.Biol.Chem., 294, 2019
8JTJ
DownloadVisualize
BU of 8jtj by Molmil
Cryo-EM structure of GeoCas9-sgRNA-dsDNA ternary complex
分子名称: CRISPR-associated endonuclease Cas9, DNA (29-MER), DNA (5'-D(P*GP*GP*GP*CP*GP*CP*GP*AP*A)-3'), ...
著者Shen, P.P, Liu, B.B, Li, X, Zhang, L.L, Chen, C.-C, Guo, R.-T.
登録日2023-06-21
公開日2024-06-05
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Cryo-EM structure of GeoCas9-sgRNA-DNA ternary complex
To Be Published
5MZK
DownloadVisualize
BU of 5mzk by Molmil
Pseudomonas fluorescens kynurenine 3-monooxygenase (KMO) in complex with 3-[5-chloro-6-(cyclobutylmethoxy)-2-oxo-2,3-dihydro-1,3-benzoxazol-3-yl]propanoic acid
分子名称: 3-[5-chloro-6-(cyclobutylmethoxy)-2-oxo-2,3-dihydro-1,3-benzoxazol-3-yl]propanoic acid, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Rowland, P.
登録日2017-01-31
公開日2017-04-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Development of a Series of Kynurenine 3-Monooxygenase Inhibitors Leading to a Clinical Candidate for the Treatment of Acute Pancreatitis.
J. Med. Chem., 60, 2017
5YI3
DownloadVisualize
BU of 5yi3 by Molmil
Structure of Lactococcus lactis ZitR, C30S mutant in complex with DNA
分子名称: DNA (5'-D(*TP*GP*TP*TP*AP*AP*CP*TP*AP*GP*TP*TP*AP*AP*CP*A)-3'), ZINC ION, Zinc transport transcriptional regulator
著者Song, Y, Liu, H, Zhu, R, Yi, C, Chen, P.
登録日2017-10-01
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Allosteric histidine switch for regulation of intracellular zinc(II) fluctuation.
Proc.Natl.Acad.Sci.USA, 114, 2017
8S8G
DownloadVisualize
BU of 8s8g by Molmil
Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2.1)
分子名称: 18S ribosomal RNA, 40S ribosomal protein L41-A, 40S ribosomal protein S12, ...
著者Villamayor-Belinchon, L, Sharma, P, Llacer, J.L, Hussain, T.
登録日2024-03-06
公開日2024-09-11
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis of AUC codon discrimination during translation initiation in yeast.
Nucleic Acids Res., 2024
8RW1
DownloadVisualize
BU of 8rw1 by Molmil
Structure of a yeast 48S-AUC preinitiation complex in closed conformation
分子名称: 18S ribosomal RNA, 40S ribosomal protein L41-A, 40S ribosomal protein S12, ...
著者Villamayor-Belinchon, L, Sharma, P, Llacer, J.L, Hussain, T.
登録日2024-02-02
公開日2024-09-11
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structural basis of AUC codon discrimination during translation initiation in yeast.
Nucleic Acids Res., 2024
7PKK
DownloadVisualize
BU of 7pkk by Molmil
LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
分子名称: (2R,4R)-1-cyclopropylcarbonyl-4-[[(2S,4S)-4-fluoranylpyrrolidin-2-yl]carbonylamino]-N-[[4-[2-[4-(morpholin-4-ylmethyl)phenyl]ethynyl]phenyl]methyl]pyrrolidine-2-carboxamide, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ZINC ION
著者Ryan, M.D, Pallin, T.D, Lamers, M.B.A.C, Leonard, P.M.
登録日2021-08-25
公開日2022-09-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
To Be Published
8S8E
DownloadVisualize
BU of 8s8e by Molmil
Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-3.1)
分子名称: 18S ribosomal RNA, 40S ribosomal protein L41-A, 40S ribosomal protein S12, ...
著者Villamayor-Belinchon, L, Sharma, P, Llacer, J.L, Hussain, T.
登録日2024-03-06
公開日2024-09-11
実験手法ELECTRON MICROSCOPY (3.85 Å)
主引用文献Structural basis of AUC codon discrimination during translation initiation in yeast.
Nucleic Acids Res., 2024
8S8J
DownloadVisualize
BU of 8s8j by Molmil
Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-eIF5)
分子名称: 18S ribosomal RNA, 40S ribosomal protein L41-A, 40S ribosomal protein S12, ...
著者Villamayor-Belinchon, L, Sharma, P, Llacer, J.L, Hussain, T.
登録日2024-03-06
公開日2024-09-11
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structural basis of AUC codon discrimination during translation initiation in yeast.
Nucleic Acids Res., 2024
8S8D
DownloadVisualize
BU of 8s8d by Molmil
Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2)
分子名称: 18S ribosomal RNA, 40S ribosomal protein L41-A, 40S ribosomal protein S12, ...
著者Villamayor-Belinchon, L, Sharma, P, Llacer, J.L, Hussain, T.
登録日2024-03-06
公開日2024-09-11
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structural basis of AUC codon discrimination during translation initiation in yeast.
Nucleic Acids Res., 2024
8S8H
DownloadVisualize
BU of 8s8h by Molmil
Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2.2)
分子名称: 18S ribosomal RNA, 40S ribosomal protein L41-A, 40S ribosomal protein S12, ...
著者Villamayor-Belinchon, L, Sharma, P, Llacer, J.L, Hussain, T.
登録日2024-03-06
公開日2024-09-11
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis of AUC codon discrimination during translation initiation in yeast.
Nucleic Acids Res., 2024
7PK8
DownloadVisualize
BU of 7pk8 by Molmil
LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
分子名称: (2S,4S)-4-fluoranyl-N-[(3R,5R)-5-[[[4-[2-(4-methylphenyl)ethynyl]phenyl]carbonylamino]methyl]-1-(2-methylpropanoyl)pyrrolidin-3-yl]pyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ...
著者Ryan, M.D, Pallin, T.D, Lamers, M.B.A.C, Leonard, P.M.
登録日2021-08-25
公開日2022-09-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
To Be Published
7PHN
DownloadVisualize
BU of 7phn by Molmil
LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
分子名称: (2~{R},4~{R})-4-[[(2~{S},4~{S})-4-fluoranylpyrrolidin-2-yl]carbonylamino]-1-(2-methylpropanoyl)-~{N}-[[4-(2-phenylethynyl)phenyl]methyl]pyrrolidine-2-carboxamide, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ZINC ION
著者Ryan, M.D, Pallin, T.D, Lamers, M.B.A.C, Leonard, P.M.
登録日2021-08-17
公開日2022-09-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
To Be Published
7PJG
DownloadVisualize
BU of 7pjg by Molmil
LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
分子名称: (2R,4R)-N-[[4-(4-cyclopropylbuta-1,3-diynyl)phenyl]methyl]-1-(2-methylpropanoyl)-4-[[(2S,4R)-4-oxidanylpyrrolidin-2-yl]carbonylamino]pyrrolidine-2-carboxamide, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ZINC ION
著者Ryan, M.D, Pallin, T.D, Lamers, M.B.A.C, Leonard, P.M.
登録日2021-08-24
公開日2022-09-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
To Be Published
5NAH
DownloadVisualize
BU of 5nah by Molmil
Pseudomonas fluorescens kynurenine 3-monooxygenase (KMO) in complex with 3-{5-chloro-6-[(1R)-1-(6-methylpyridazin-3-yl)ethoxy]-1,2-benzoxazol-3-yl}propanoic acid
分子名称: 3-[5-chloranyl-6-[(1~{R})-1-(6-methylpyridazin-3-yl)ethoxy]-1,2-benzoxazol-3-yl]propanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, Kynurenine 3-monooxygenase
著者Rowland, P.
登録日2017-02-27
公開日2017-06-21
最終更新日2017-07-19
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural and mechanistic basis of differentiated inhibitors of the acute pancreatitis target kynurenine-3-monooxygenase.
Nat Commun, 8, 2017

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon