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PDB: 79 results

4E94
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Crystal structure of MccF-like protein from Streptococcus pneumoniae
Descriptor: GLYCEROL, MccC family protein, SULFATE ION
Authors:Nocek, B, Tikhonov, A, Kwon, K, Severinov, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-03-20
Release date:2012-05-09
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Crystal structure of MccF-like protein from Streptococcus pneumoniae
TO BE PUBLISHED
2B1I
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crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase
Descriptor: Bifunctional purine biosynthesis protein PURH, POTASSIUM ION, [3,4-DIHYDROXY-5R-(2,2,4-TRIOXO-1,2R,3S,4R-TETRAHYDRO-2L6-IMIDAZO[4,5-C][1,2,6]THIADIAZIN-7-YL)TETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN PHOSPHATE
Authors:Xu, L, Chong, Y, Hwang, I, D'Onofrio, A, Amore, K, Beardsley, G.P, Li, C, Olson, A.J, Boger, D.L, Wilson, I.A.
Deposit date:2005-09-15
Release date:2006-11-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structure-based Design, Synthesis, Evaluation, and Crystal Structures of Transition State Analogue Inhibitors of Inosine Monophosphate Cyclohydrolase.
J.Biol.Chem., 282, 2007
2FSH
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Complex SecA:AMP-PNP from Escherichia coli
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Preprotein translocase secA subunit
Authors:Papanikolau, Y, Petratos, K, Economou, A.
Deposit date:2006-01-23
Release date:2007-01-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of dimeric SecA, the Escherichia coli preprotein translocase motor.
J.Mol.Biol., 366, 2007
2FSG
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Complex SecA:ATP from Escherichia coli
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Preprotein translocase secA subunit
Authors:Papanikolau, Y, Petratos, K, Economou, A.
Deposit date:2006-01-23
Release date:2007-01-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of dimeric SecA, the Escherichia coli preprotein translocase motor.
J.Mol.Biol., 366, 2007
2FSF
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Escherichia coli SecA, the preprotein translocase dimeric ATPase
Descriptor: Preprotein translocase secA subunit
Authors:Papanikolau, Y, Petratos, K, Economou, A.
Deposit date:2006-01-23
Release date:2007-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of dimeric SecA, the Escherichia coli preprotein translocase motor.
J.Mol.Biol., 366, 2007
2FSI
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Complex SecA:ADP from Escherichia coli
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Preprotein translocase secA subunit
Authors:Papanikolau, Y, Petratos, K, Economou, A.
Deposit date:2006-01-23
Release date:2007-01-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structure of dimeric SecA, the Escherichia coli preprotein translocase motor.
J.Mol.Biol., 366, 2007
2B1G
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BU of 2b1g by Molmil
Crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase
Descriptor: 7-(3,4-DIHYDROXY-5R-HYDROXYMETHYLTETRAHYDROFURAN-2-YL)-2,2-DIOXO-1,2R,3R,7-TETRAHYDRO-2L6-IMIDAZO[4,5-C][1,2,6]THIADIAZIN-4S-ONE, Bifunctional purine biosynthesis protein PURH, PHOSPHATE ION, ...
Authors:Xu, L, Chong, Y, Hwang, I, D'Onofrio, A, Amore, K, Beardsley, G.P, Li, C, Olson, A.J, Boger, D.L, Wilson, I.A.
Deposit date:2005-09-15
Release date:2006-11-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-based Design, Synthesis, Evaluation, and Crystal Structures of Transition State Analogue Inhibitors of Inosine Monophosphate Cyclohydrolase.
J.Biol.Chem., 282, 2007
2LHK
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Structural analysis of a chaperone in type III secretion system
Descriptor: L0052
Authors:Chen, L, Economou, A, Kalodimos, C.G.
Deposit date:2011-08-11
Release date:2011-12-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural instability tuning as a regulatory mechanism in protein-protein interactions.
Mol.Cell, 44, 2011
2VDA
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BU of 2vda by Molmil
Solution structure of the SecA-signal peptide complex
Descriptor: MALTOPORIN, TRANSLOCASE SUBUNIT SECA
Authors:Gelis, I, Bonvin, A.M.J.J, Keramisanou, D, Koukaki, M, Gouridis, G, Karamanou, S, Economou, A, Kalodimos, C.G.
Deposit date:2007-10-01
Release date:2007-11-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis for Signal-Sequence Recognition by the Translocase Motor Seca as Determined by NMR
Cell(Cambridge,Mass.), 131, 2007
2MLX
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BU of 2mlx by Molmil
NMR structure of E. coli Trigger Factor in complex with unfolded PhoA220-310
Descriptor: Alkaline phosphatase, Trigger factor
Authors:Saio, T, Guan, X, Rossi, P, Economou, A, Kalodimos, C.G.
Deposit date:2014-03-05
Release date:2014-05-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for protein antiaggregation activity of the trigger factor chaperone.
Science, 344, 2014
2IU3
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BU of 2iu3 by Molmil
Crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase
Descriptor: 1,5-DIHYDROIMIDAZO[4,5-C][1,2,6]THIADIAZIN-4(3H)-ONE 2,2-DIOXIDE, BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH, POTASSIUM ION
Authors:Xu, L, Chong, Y, Hwang, I, D'Onofrio, A, Amore, K, Beardsley, G.P, Li, C, Olson, A.J, Boger, D.L, Wilson, I.A.
Deposit date:2006-05-27
Release date:2007-02-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-based design, synthesis, evaluation, and crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase.
J. Biol. Chem., 282, 2007
2M1N
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Solution structure of a chaperone in type III secretion system
Descriptor: Type III secretion system filament chaperone CesA
Authors:Chen, L, Economou, A, Kalodimos, C.
Deposit date:2012-12-03
Release date:2013-04-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Substrate-Activated Conformational Switch on Chaperones Encodes a Targeting Signal in Type III Secretion.
Cell Rep, 3, 2013
2K3H
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BU of 2k3h by Molmil
Structural determinants for Ca2+ and PIP2 binding by the C2A domain of rabphilin-3A
Descriptor: CALCIUM ION, Rabphilin-3A
Authors:Coudevylle, N, Montaville, P, Leonov, A, Zweckstetter, M, Becker, S.
Deposit date:2008-05-08
Release date:2008-10-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural Determinants for Ca2+ and Phosphatidylinositol 4,5-Bisphosphate Binding by the C2A Domain of Rabphilin-3A.
J.Biol.Chem., 283, 2008
2MLZ
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BU of 2mlz by Molmil
NMR structure of E. coli Trigger Factor in complex with unfolded PhoA365-471
Descriptor: Alkaline phosphatase, Trigger factor
Authors:Saio, T, Guan, X, Rossi, P, Economou, A, Kalodimos, C.G.
Deposit date:2014-03-05
Release date:2014-05-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for protein antiaggregation activity of the trigger factor chaperone.
Science, 344, 2014
3WJC
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BU of 3wjc by Molmil
Crystal structure of mutant nitrobindin M75L/H76L/Q96C/M148L/H158L covalently linked with [Rh(Cp-Mal)(COD)] (NB4-Rh) from Arabidopsis thaliana
Descriptor: BARIUM ION, UPF0678 fatty acid-binding protein-like protein At1g79260, [(1,2,5,6-eta)-cyclooctane-1,2,5,6-tetrayl]{(1,2,3,4,5-eta)-1-[2-(2,5-dioxopyrrolidin-1-yl)ethyl]cyclopentadienyl}rhodium
Authors:Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
Deposit date:2013-10-08
Release date:2014-04-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
3WHN
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BU of 3whn by Molmil
Hemerythrin-like domain of DcrH I119H mutant (met)
Descriptor: CALCIUM ION, CHLORO DIIRON-OXO MOIETY, Hemerythrin-like domain protein DcrH
Authors:Okamoto, Y, Onoda, A, Sugimoto, H, Takano, Y, Hirota, S, Kurtz Jr, D.M, Shiro, Y, Hayashi, T.
Deposit date:2013-08-29
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:H2O2-dependent substrate oxidation by an engineered diiron site in a bacterial hemerythrin.
Chem.Commun.(Camb.), 50, 2014
2DM5
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BU of 2dm5 by Molmil
Thermodynamic Penalty Arising From Burial of a Ligand Polar Group Within a Hydrophobic Pocket of a Protein Receptor
Descriptor: CADMIUM ION, Major Urinary Protein, OCTANE-1,8-DIOL
Authors:Barratt, E, Bronowska, A, Vondrasek, J, Bingham, R, Phillips, S, Homans, S.W.
Deposit date:2006-04-20
Release date:2006-10-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Thermodynamic penalty arising from burial of a ligand polar group within a hydrophobic pocket of a protein receptor
J.Mol.Biol., 362, 2006
3WJD
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BU of 3wjd by Molmil
Crystal structure of mutant nitrobindin F44W/M75L/H76L/Q96C/M148L/H158L (NB5) from Arabidopsis thaliana
Descriptor: GLYCEROL, UPF0678 fatty acid-binding protein-like protein At1g79260
Authors:Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
Deposit date:2013-10-08
Release date:2014-04-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
3WJB
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BU of 3wjb by Molmil
Crystal structure of mutant nitrobindin M75L/H76L/Q96C/M148L/H158L (NB4) from Arabidopsis thaliana
Descriptor: BARIUM ION, HEXAETHYLENE GLYCOL, UPF0678 fatty acid-binding protein-like protein At1g79260
Authors:Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
Deposit date:2013-10-08
Release date:2014-04-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
2MLY
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BU of 2mly by Molmil
NMR structure of E. coli Trigger Factor in complex with unfolded PhoA1-150
Descriptor: Alkaline phosphatase, Trigger factor
Authors:Saio, T, Guan, X, Rossi, P, Economou, A, Kalodimos, C.G.
Deposit date:2014-03-05
Release date:2014-05-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for protein antiaggregation activity of the trigger factor chaperone.
Science, 344, 2014
3WJE
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BU of 3wje by Molmil
Crystal structure of mutant nitrobindin M75W/H76L/Q96C/M148L/H158L (NB6) from Arabidopsis thaliana
Descriptor: UPF0678 fatty acid-binding protein-like protein At1g79260
Authors:Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
Deposit date:2013-10-08
Release date:2014-04-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
3WJF
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BU of 3wjf by Molmil
Crystal structure of mutant nitrobindin M75L/H76L/Q96C/V128W/M148L/H158L (NB9) from Arabidopsis thaliana
Descriptor: UPF0678 fatty acid-binding protein-like protein At1g79260
Authors:Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
Deposit date:2013-10-08
Release date:2014-04-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
3WAQ
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BU of 3waq by Molmil
Hemerythrin-like domain of DcrH I119E mutant (met)
Descriptor: Hemerythrin-like domain protein DcrH, MU-OXO-DIIRON
Authors:Okamoto, Y, Onoda, A, Sugimoto, H, Takano, Y, Hirota, S, Kurtz Jr, D.M, Shiro, Y, Hayashi, T.
Deposit date:2013-05-07
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure, exogenous ligand binding, and redox properties of an engineered diiron active site in a bacterial hemerythrin
Inorg.Chem., 52, 2013
3WJG
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BU of 3wjg by Molmil
Crystal structure of mutant nitrobindin M75L/H76L/Q96C/M148W/H158L (NB10) from Arabidopsis thaliana
Descriptor: GLYCEROL, UPF0678 fatty acid-binding protein-like protein At1g79260
Authors:Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
Deposit date:2013-10-08
Release date:2014-04-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
3PSL
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BU of 3psl by Molmil
Fine-tuning the stimulation of MLL1 methyltransferase activity by a histone H3 based peptide mimetic
Descriptor: N-alpha acetylated form of histone H3, WD repeat-containing protein 5
Authors:Avdic, V, Zhang, P, Lanouette, S, Voronova, A, Skerjanc, I, Couture, J.-F.
Deposit date:2010-12-01
Release date:2010-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Fine-tuning the stimulation of MLL1 methyltransferase activity by a histone H3-based peptide mimetic.
Faseb J., 25, 2011

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