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PDB: 180 results

6Q3T
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Structure of Protease1 from Pyrococcus horikoshii at room temperature in ChipX microfluidic device
Descriptor: Deglycase PH1704
Authors:de Wijn, R, Engilberge, S, Olieric, V, Girard, E, Sauter, C.
Deposit date:2018-12-04
Release date:2019-05-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A simple and versatile microfluidic device for efficient biomacromolecule crystallization and structural analysis by serial crystallography.
Iucrj, 6, 2019
4A91
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BU of 4a91 by Molmil
Crystal structure of the glutamyl-queuosine tRNAAsp synthetase from E. coli complexed with L-glutamate
Descriptor: GLUTAMIC ACID, GLUTAMYL-Q TRNA(ASP) SYNTHETASE, ZINC ION
Authors:Blaise, M, Olieric, V, Sauter, C, Lorber, B, Roy, B, Karmakar, S, Banerjee, R, Becker, H.D, Kern, D.
Deposit date:2011-11-22
Release date:2012-01-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Glutamyl-Queuosine Trnaasp Synthetase Complexed with L-Glutamate: Structural Elements Mediating tRNA-Independent Activation of Glutamate and Glutamylation of Trnaasp Anticodon.
J.Mol.Biol., 381, 2008
7DHG
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BU of 7dhg by Molmil
Crystal structure of SARS-CoV-2 Orf9b complex with human TOM70
Descriptor: Mitochondrial import receptor subunit TOM70, ORF9b protein
Authors:Gao, X, Zhu, K, Qin, B, Olieric, V, Wang, M, Cui, S.
Deposit date:2020-11-14
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of SARS-CoV-2 Orf9b in complex with human TOM70 suggests unusual virus-host interactions.
Nat Commun, 12, 2021
6XYR
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BU of 6xyr by Molmil
Structure of the T4Lnano fusion protein
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Benoit, R.M, Bierig, T, Collu, C, Engilberge, S, Olieric, V.
Deposit date:2020-01-31
Release date:2020-12-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.079 Å)
Cite:Chimeric single alpha-helical domains as rigid fusion protein connections for protein nanotechnology and structural biology.
Structure, 30, 2022
4U47
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BU of 4u47 by Molmil
Octameric RNA duplex soaked in terbium(III)chloride
Descriptor: RNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3'), TERBIUM(III) ION
Authors:Schaffer, M.F, Spingler, B, Schnabl, J, Peng, G, Olieric, V, Sigel, R.K.O.
Deposit date:2014-07-23
Release date:2015-08-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:The X-ray Structures of Six Octameric RNA Duplexes in the Presence of Different Di- and Trivalent Cations.
Int J Mol Sci, 17, 2016
4U3P
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Octameric RNA duplex co-crystallized with strontium(II)chloride
Descriptor: RNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3'), STRONTIUM ION
Authors:Schaffer, M.F, Spingler, B, Schnabl, J, Peng, G, Olieric, V, Sigel, R.K.O.
Deposit date:2014-07-22
Release date:2015-07-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.866 Å)
Cite:The X-ray Structures of Six Octameric RNA Duplexes in the Presence of Different Di- and Trivalent Cations.
Int J Mol Sci, 17, 2016
4U3R
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BU of 4u3r by Molmil
Octameric RNA duplex co-crystallized with cobalt(II)chloride
Descriptor: COBALT (II) ION, RNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3')
Authors:Schaffer, M.F, Spingler, B, Schnabl, J, Peng, G, Olieric, V, Sigel, R.K.O.
Deposit date:2014-07-22
Release date:2015-07-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:The X-ray Structures of Six Octameric RNA Duplexes in the Presence of Different Di- and Trivalent Cations.
Int J Mol Sci, 17, 2016
4U3O
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BU of 4u3o by Molmil
Octameric RNA duplex soaked in manganese(II)chloride
Descriptor: MANGANESE (II) ION, RNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3')
Authors:Schaffer, M.F, Spingler, B, Schnabl, J, Peng, G, Olieric, V, Sigel, R.K.O.
Deposit date:2014-07-22
Release date:2015-07-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The X-ray Structures of Six Octameric RNA Duplexes in the Presence of Different Di- and Trivalent Cations.
Int J Mol Sci, 17, 2016
4U3L
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BU of 4u3l by Molmil
octameric RNA duplex co-crystallized in calcium(II)chloride
Descriptor: CALCIUM ION, RNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3')
Authors:Schaffer, M.F, Spingler, B, Schnabl, J, Peng, G, Olieric, V, Sigel, R.K.O.
Deposit date:2014-07-22
Release date:2015-07-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.482 Å)
Cite:The X-ray Structures of Six Octameric RNA Duplexes in the Presence of Different Di- and Trivalent Cations.
Int J Mol Sci, 17, 2016
6YT3
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BU of 6yt3 by Molmil
Structure of the MoStoNano fusion protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Molybdenum storage protein subunit alpha, ...
Authors:Benoit, R.M, Bierig, T, Collu, C, Engilberge, S, Olieric, V.
Deposit date:2020-04-23
Release date:2020-12-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Chimeric single alpha-helical domains as rigid fusion protein connections for protein nanotechnology and structural biology.
Structure, 30, 2022
6YWL
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BU of 6ywl by Molmil
Crystal structure of SARS-CoV-2 (Covid-19) NSP3 macrodomain in complex with ADP-ribose
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5-DIPHOSPHORIBOSE, MAGNESIUM ION, ...
Authors:Schroeder, M, Ni, X, Olieric, V, Sharpe, E.M, Wojdyla, J.A, Wang, M, Knapp, S, Chaikuad, A, Structural Genomics Consortium (SGC)
Deposit date:2020-04-29
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights into Plasticity and Discovery of Remdesivir Metabolite GS-441524 Binding in SARS-CoV-2 Macrodomain.
Acs Med.Chem.Lett., 12, 2021
6YWM
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BU of 6ywm by Molmil
Crystal structure of SARS-CoV-2 (Covid-19) NSP3 macrodomain in complex with MES
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, ...
Authors:Ni, X, Schroeder, M, Olieric, V, Sharpe, E.M, Wojdyla, J.A, Wang, M, Knapp, S, Chaikuad, A, Structural Genomics Consortium (SGC)
Deposit date:2020-04-29
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural Insights into Plasticity and Discovery of Remdesivir Metabolite GS-441524 Binding in SARS-CoV-2 Macrodomain.
Acs Med.Chem.Lett., 12, 2021
6YWK
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BU of 6ywk by Molmil
Crystal structure of SARS-CoV-2 (Covid-19) NSP3 macrodomain in complex with HEPES
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, ...
Authors:Ni, X, Schroeder, M, Olieric, V, Sharpe, E.M, Wojdyla, J.A, Wang, M, Knapp, S, Chaikuad, A, Structural Genomics Consortium (SGC)
Deposit date:2020-04-29
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insights into Plasticity and Discovery of Remdesivir Metabolite GS-441524 Binding in SARS-CoV-2 Macrodomain.
Acs Med.Chem.Lett., 12, 2021
8PAY
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BU of 8pay by Molmil
Structure of the E.coli DNA polymerase sliding clamp with a covalently bound peptide 2.
Descriptor: ACE-GLN-ALC-GLC-LEU-PHE, Beta sliding clamp, GLYCEROL, ...
Authors:Compain, G, Monsarrat, C, Blagojevic, J, Brillet, K, Dumas, P, Hammann, P, Kuhn, L, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Burnouf, D, wagner, J, Guichard, G.
Deposit date:2023-06-08
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Peptide-Based Covalent Inhibitors Bearing Mild Electrophiles to Target a Conserved His Residue of the Bacterial Sliding Clamp.
Jacs Au, 4, 2024
8PAT
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BU of 8pat by Molmil
Structure of the E.coli DNA polymerase sliding clamp with a covalently bound peptide 3.
Descriptor: ACE-GLN-ALC-GLX-LEU-PHE, Beta sliding clamp
Authors:Compain, G, Monsarrat, C, Blagojevic, J, Brillet, K, Dumas, P, Hammann, P, Kuhn, L, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Burnouf, D, Guichard, G.
Deposit date:2023-06-08
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Peptide-Based Covalent Inhibitors Bearing Mild Electrophiles to Target a Conserved His Residue of the Bacterial Sliding Clamp.
Jacs Au, 4, 2024
8Q2O
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BU of 8q2o by Molmil
Structure of alginate transporter AlgE from P. aeruginosa PAO1 by using Se-MAG for the the lipid cubic phase crystallization
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, Alginate production protein AlgE, ...
Authors:Huang, C.-Y, Boland, C, Kaki, S.S, Wang, M, Olieric, V, Caffrey, M.
Deposit date:2023-08-03
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Se-MAG Is a Convenient Additive for Experimental Phasing and Structure Determination of Membrane Proteins Crystallised by the Lipid Cubic Phase (In Meso) Method
Crystals, 2023
8Q2P
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BU of 8q2p by Molmil
Structure of the membrane integral lipoprotein N-acyltransferase Lnt from E. coli by using Se-MAG for the the lipid cubic phase crystallization
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, Apolipoprotein N-acyltransferase, ...
Authors:Huang, C.-Y, Boland, C, Kaki, S.S, Wang, M, Olieric, V, Caffrey, M.
Deposit date:2023-08-03
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Se-MAG Is a Convenient Additive for Experimental Phasing and Structure Determination of Membrane Proteins Crystallised by the Lipid Cubic Phase (In Meso) Method
Crystals, 2023
4BS3
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BU of 4bs3 by Molmil
Bovin insulin structure determined by in situ crystal analysis and sulfur-SAD phasing at room temperature
Descriptor: INSULIN A CHAIN, INSULIN B CHAIN
Authors:Pinker, F, Stirnimann, C, Sauter, C, Olieric, V.
Deposit date:2013-06-06
Release date:2013-07-17
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Chipx: A Novel Microfluidic Chip for Counter- Diffusion Crystallization of Biomolecules and in Situ Crystal Analysis at Room Temperature
J.Cryst.Growth, 13, 2013
4BPM
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BU of 4bpm by Molmil
Crystal structure of a human integral membrane enzyme
Descriptor: 2-[[2,6-bis(chloranyl)-3-[(2,2-dimethylpropanoylamino)methyl]phenyl]amino]-1-methyl-6-(2-methyl-2-oxidanyl-propoxy)-N-[2,2,2-tris(fluoranyl)ethyl]benzimidazole-5-carboxamide, GLUTATHIONE, PROSTAGLANDIN E SYNTHASE, ...
Authors:Li, D, Wang, M, Olieric, V, Caffrey, M.
Deposit date:2013-05-27
Release date:2014-04-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Crystallizing Membrane Proteins in the Lipidic Mesophase. Experience with Human Prostaglandin E2 Synthase 1 and an Evolving Strategy.
Cryst.Growth Des., 14, 2014
4BS7
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BU of 4bs7 by Molmil
Hen egg-white lysozyme structure determined at room temperature by in- situ diffraction and SAD phasing in ChipX
Descriptor: LYSOZYME C, YTTERBIUM (III) ION
Authors:Pinker, F, Lorber, B, Olieric, V, Sauter, C.
Deposit date:2013-06-07
Release date:2013-10-30
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Chipx: A Novel Microfluidic Chip for Counter- Diffusion Crystallization of Biomolecules and in Situ Crystal Analysis at Room Temperature
Cryst.Growth Des., 13, 2013
5DWK
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BU of 5dwk by Molmil
Diacylglycerol Kinase solved by multi crystal multi orientation native SAD
Descriptor: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, ACETATE ION, ...
Authors:Weinert, T, Olieric, V, Finke, A.D, Li, D, Caffrey, M, Wang, M.
Deposit date:2015-09-22
Release date:2016-03-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Data-collection strategy for challenging native SAD phasing.
Acta Crystallogr D Struct Biol, 72, 2016
3DVV
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BU of 3dvv by Molmil
Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to ribostamycin (U267OMe)
Descriptor: CHLORIDE ION, HIV-1 genomic RNA, POTASSIUM ION, ...
Authors:Ennifar, E, Dumas, P, Olieric, V.
Deposit date:2008-07-21
Release date:2008-08-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:A fast strategy for Selenium derivatization and phasing of RNA structures
To be Published
3Q4J
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BU of 3q4j by Molmil
Structure of a small peptide ligand bound to E.coli DNA sliding clamp
Descriptor: DNA polymerase III subunit beta, peptide ligand
Authors:Wolff, P, Olieric, V, Briand, J.P, Chaloin, O, Dejaegere, A, Dumas, P, Ennifar, E, Guichard, G, Wagner, J, Burnouf, D.
Deposit date:2010-12-23
Release date:2011-12-28
Last modified:2013-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-based design of short peptide ligands binding onto the E. coli processivity ring.
J.Med.Chem., 54, 2011
3Q4K
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BU of 3q4k by Molmil
Structure of a small peptide ligand bound to E.coli DNA sliding clamp
Descriptor: DNA polymerase III subunit beta, peptide ligand
Authors:Wolff, P, Olieric, V, Briand, J.P, Chaloin, O, Dejaegere, A, Dumas, P, Ennifar, E, Guichard, G, Wagner, J, Burnouf, D.
Deposit date:2010-12-23
Release date:2011-12-28
Last modified:2013-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure-based design of short peptide ligands binding onto the E. coli processivity ring.
J.Med.Chem., 54, 2011
5MKK
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BU of 5mkk by Molmil
Crystal structure of the heterodimeric ABC transporter TmrAB, a homolog of the antigen translocation complex TAP
Descriptor: Multidrug resistance ABC transporter ATP-binding and permease protein, SULFATE ION
Authors:Noell, A, Thomas, C, Tomasiak, T.M, Olieric, V, Wang, M, Diederichs, K, Stroud, R.M, Pos, K.M, Tampe, R.
Deposit date:2016-12-05
Release date:2017-01-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure and mechanistic basis of a functional homolog of the antigen transporter TAP.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

224004

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