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PDB: 192 results

2JPE
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FHA domain of NIPP1
Descriptor: Nuclear inhibitor of protein phosphatase 1
Authors:Kumeta, H, Ogura, K, Fujioka, Y, Tanuma, N, Kikuchi, K, Inagaki, F.
Deposit date:2007-05-07
Release date:2007-05-15
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:The NMR structure of the NIPP1 FHA domain.
J.Biomol.Nmr, 40, 2008
6ZU5
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BU of 6zu5 by Molmil
Structure of the Paranosema locustae ribosome in complex with Lso2
Descriptor: 18S rRNA, 25S rRNA, 5S rRNA, ...
Authors:Ehrenbolger, K, Jespersen, N, Sharma, H, Sokolova, Y.Y, Tokarev, Y.S, Vossbrinck, C.R, Barandun, J.
Deposit date:2020-07-21
Release date:2020-11-04
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Differences in structure and hibernation mechanism highlight diversification of the microsporidian ribosome.
Plos Biol., 18, 2020
1V8K
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The Crystal Structure of the Minimal Functional Domain of the Microtubule Destabilizer KIF2C Complexed with Mg-AMPPNP
Descriptor: Kinesin-like protein KIF2C, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Ogawa, T, Nitta, R, Okada, Y, Hirokawa, N.
Deposit date:2004-01-09
Release date:2004-03-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A common mechanism for microtubule destabilizers-M type kinesins stabilize curling of the protofilament using the class-specific neck and loops.
Cell(Cambridge,Mass.), 116, 2004
3WYY
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CRYSTAL STRUCTURE OF HUMAN MPS1 CATALYTIC DOMAIN IN COMPLEX WITH (E)-3-(4-((6-(((3s,5s,7s)-adamantan-1-yl)amino)-4-amino-5-cyanopyridin-2-yl)amino)-2-(cyanomethoxy)phenyl)-N-(2-methoxyethyl)acrylamide
Descriptor: (2E)-3-[4-({4-amino-5-cyano-6-[(3s,5s,7s)-tricyclo[3.3.1.1~3,7~]dec-1-ylamino]pyridin-2-yl}amino)-2-(cyanomethoxy)phenyl]-N-(2-methoxyethyl)prop-2-enamide, Dual specificity protein kinase TTK
Authors:Kusakabe, K, Ide, N, Daigo, Y, Itoh, T, Yamamoto, T, Kojima, E, Mitsuoka, Y, Tadano, G, Tagashira, S, Higashino, K, Okano, Y, Sato, Y, Inoue, M, Iguchi, M, Kanazawa, T, Ishioka, Y, Dohi, K, Kido, Y, Sakamoto, S, Ando, S, Maeda, M, Higaki, M, Yoshizawa, H, Murai, H, Nakamura, Y.
Deposit date:2014-09-10
Release date:2015-04-08
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:A unique hinge binder of extremely selective aminopyridine-based Mps1 (TTK) kinase inhibitors with cellular activity.
Bioorg.Med.Chem., 23, 2015
3WZJ
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CRYSTAL STRUCTURE OF HUMAN MPS1 CATALYTIC DOMAIN IN COMPLEX WITH 4-(6-(cyclohexylamino)-8-(((tetrahydro-2H-pyran-4-yl)methyl)amino)imidazo[1,2-b]pyridazin-3-yl)-N-cyclopropylbenzamide
Descriptor: 4-{6-(cyclohexylamino)-8-[(tetrahydro-2H-pyran-4-ylmethyl)amino]imidazo[1,2-b]pyridazin-3-yl}-N-cyclopropylbenzamide, Dual specificity protein kinase TTK
Authors:Kusakabe, K, Ide, N, Daigo, Y, Itoh, T, Yamamoto, T, Kojima, E, Mitsuoka, Y, Tadano, G, Tagashira, S, Higashino, K, Okano, Y, Sato, Y, Inoue, M, Iguchi, M, Kanazawa, T, Ishioka, Y, Dohi, K, Kido, Y, Sakamoto, S, Ando, S, Maeda, M, Higaki, M, Yoshizawa, H, Mura, H, Nakamura, Y.
Deposit date:2014-09-29
Release date:2015-02-11
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Discovery of imidazo[1,2-b]pyridazine derivatives: selective and orally available Mps1 (TTK) kinase inhibitors exhibiting remarkable antiproliferative activity.
J.Med.Chem., 58, 2015
3WYX
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BU of 3wyx by Molmil
CRYSTAL STRUCTURE OF HUMAN MPS1 CATALYTIC DOMAIN IN COMPLEX WITH 6-((3-(cyanomethoxy)-4-(1-methyl-1H-pyrazol-4-yl)phenyl)amino)-2-(cyclohexylamino)nicotinonitrile
Descriptor: 6-{[3-(cyanomethoxy)-4-(1-methyl-1H-pyrazol-4-yl)phenyl]amino}-2-(cyclohexylamino)pyridine-3-carbonitrile, Dual specificity protein kinase TTK, IODIDE ION
Authors:Kusakabe, K, Ide, N, Daigo, Y, Itoh, T, Yamamoto, T, Kojima, E, Mitsuoka, Y, Tadano, G, Tagashira, S, Higashino, K, Okano, Y, Sato, Y, Inoue, M, Iguchi, M, Kanazawa, T, Ishioka, Y, Dohi, K, Kido, Y, Sakamoto, S, Ando, S, Maeda, M, Higaki, M, Yoshizawa, H, Mura, H, Nakamura, Y.
Deposit date:2014-09-09
Release date:2015-04-08
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A unique hinge binder of extremely selective aminopyridine-based Mps1 (TTK) kinase inhibitors with cellular activity.
Bioorg.Med.Chem., 23, 2015
3WZK
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BU of 3wzk by Molmil
CRYSTAL STRUCTURE OF HUMAN MPS1 CATALYTIC DOMAIN IN COMPLEX WITH N-cyclopropyl-4-(8-((thiophen-2-ylmethyl)amino)imidazo[1,2-a]pyrazin-3-yl)benzamide
Descriptor: CHLORIDE ION, Dual specificity protein kinase TTK, N-cyclopropyl-4-{8-[(thiophen-2-ylmethyl)amino]imidazo[1,2-a]pyrazin-3-yl}benzamide
Authors:Kusakabe, K, Ide, N, Daigo, Y, Itoh, T, Yamamoto, T, Kojima, E, Mitsuoka, Y, Tadano, G, Tagashira, S, Higashino, K, Okano, Y, Sato, Y, Inoue, M, Iguchi, M, Kanazawa, T, Ishioka, Y, Dohi, K, Kido, Y, Sakamoto, S, Ando, S, Maeda, M, Higaki, M, Yoshizawa, H, Mura, H, Nakamura, Y.
Deposit date:2014-09-29
Release date:2015-02-11
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of imidazo[1,2-b]pyridazine derivatives: selective and orally available Mps1 (TTK) kinase inhibitors exhibiting remarkable antiproliferative activity.
J.Med.Chem., 58, 2015
4M85
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BU of 4m85 by Molmil
Crystal structure of N-acetyltransferase from Staphylococcus aureus Mu50
Descriptor: N-acetyltransferase
Authors:Srivastava, P, Khandokar, Y, Forwood, J.K.
Deposit date:2013-08-12
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Expression,purification and X-ray crystallography of N-acetyltransferase from Staphylococcus aureus
To be Published
7CCO
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BU of 7cco by Molmil
The binding structure of a lanthanide binding tag (LBT3) with lanthanum ion (La3+)
Descriptor: LANTHANUM (III) ION, LBT3
Authors:Hatanaka, T, Kikkawa, N, Matsugami, A, Hosokawa, Y, Hayashi, F, Ishida, N.
Deposit date:2020-06-17
Release date:2021-04-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The origins of binding specificity of a lanthanide ion binding peptide.
Sci Rep, 10, 2020
7CCN
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BU of 7ccn by Molmil
The binding structure of a lanthanide binding tag (LBT3) with lutetium ion (Lu3+)
Descriptor: LBT3, LUTETIUM (III) ION
Authors:Hatanaka, T, Kikkawa, N, Matsugami, A, Hosokawa, Y, Hayashi, F, Ishida, N.
Deposit date:2020-06-17
Release date:2021-04-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The origins of binding specificity of a lanthanide ion binding peptide.
Sci Rep, 10, 2020
2PNO
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BU of 2pno by Molmil
Crystal structure of human leukotriene C4 synthase
Descriptor: DODECYL-BETA-D-MALTOSIDE, GLUTATHIONE, Leukotriene C4 synthase
Authors:Ago, H, Kanaoka, Y, Irikura, D, Lam, B.K, Shimamura, T, Austen, K.F, Miyano, M.
Deposit date:2007-04-24
Release date:2007-08-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of a human membrane protein involved in cysteinyl leukotriene biosynthesis
Nature, 448, 2007
1Z9Q
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BU of 1z9q by Molmil
Solution structure of SH3 domain of p40phox
Descriptor: Neutrophil cytosol factor 4
Authors:Adachi, S, Ogura, K, Fujioka, Y, Inagaki, F.
Deposit date:2005-04-04
Release date:2006-03-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of SH3 domain of p40phox
to be published
4GHA
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BU of 4gha by Molmil
Crystal structure of Marburg virus VP35 RNA binding domain bound to 12-bp dsRNA
Descriptor: Polymerase cofactor VP35, RNA (5'-R(*CP*UP*AP*GP*AP*CP*GP*UP*CP*UP*AP*G)-3')
Authors:Bale, S, Jean-Philippe, J, Bornholdt, Z.A, Kimberlin, C.K, Halfmann, P, Zandonatti, M.A, Kunert, J, Kroon, G.J.A, Kawaoka, Y, MacRae, I.J, Wilson, I.A, Saphire, E.O.
Deposit date:2012-08-07
Release date:2012-08-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Marburg Virus VP35 Can Both Fully Coat the Backbone and Cap the Ends of dsRNA for Interferon Antagonism.
Plos Pathog., 8, 2012
4GH9
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BU of 4gh9 by Molmil
Crystal structure of Marburg virus VP35 RNA binding domain
Descriptor: ACETATE ION, Polymerase cofactor VP35
Authors:Bale, S, Jean-Philippe, J, Bornholdt, Z.A, Kimberlin, C.K, Halfmann, P, Zandonatti, M.A, Kunert, J, Kroon, G.J.A, Kawaoka, Y, MacRae, I.J, Wilson, I.A, Saphire, E.O.
Deposit date:2012-08-07
Release date:2012-08-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Marburg Virus VP35 Can Both Fully Coat the Backbone and Cap the Ends of dsRNA for Interferon Antagonism.
Plos Pathog., 8, 2012
3WKV
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BU of 3wkv by Molmil
Voltage-gated proton channel: VSOP/Hv1 chimeric channel
Descriptor: Ion channel
Authors:Takeshita, K, Sakata, S, Yamashita, E, Fujiwara, Y, Kawanabe, A, Kurokawa, T, Okochi, Y, Matsuda, M, Narita, H, Okamura, Y, Nakagawa, A.
Deposit date:2013-10-31
Release date:2014-03-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.453 Å)
Cite:X-ray crystal structure of voltage-gated proton channel.
Nat.Struct.Mol.Biol., 21, 2014
3WD8
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BU of 3wd8 by Molmil
TypeIII polyketide synthases
Descriptor: GLYCEROL, Type III polyketide synthase quinolone synthase
Authors:Mori, T, Shimokawa, Y, Matsui, T, Morita, H, Abe, I.
Deposit date:2013-06-10
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.463 Å)
Cite:Cloning, characterization, and crystal structure analysis of novel type III polyketide synthases from Citrus microcarpa
To be Published
3WD7
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BU of 3wd7 by Molmil
Type III polyketide synthase
Descriptor: COENZYME A, NICKEL (II) ION, SULFATE ION, ...
Authors:Mori, T, Shimokawa, Y, Matsui, T, Kato, R, Sugio, S, Morita, H, Abe, I.
Deposit date:2013-06-10
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Cloning, characterization, and crystal structure analysis of novel type III polyketide synthases from Citrus microcarpa
To be Published
1IT1
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BU of 1it1 by Molmil
Solution structures of ferrocytochrome c3 from Desulfovibrio vulgaris Miyazaki F
Descriptor: HEME C, cytochrome c3
Authors:Harada, E, Fukuoka, Y, Ohmura, T, Fukunishi, A, Kawai, G, Fujiwara, T, Akutsu, H.
Deposit date:2001-12-29
Release date:2002-07-10
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Redox-coupled conformational alternations in cytochrome c(3) from D. vulgaris Miyazaki F on the basis of its reduced solution structure.
J.Mol.Biol., 319, 2002
4BH1
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BU of 4bh1 by Molmil
H5 (tyTy) Influenza Virus Haemagglutinin in Complex with Avian Receptor Analogue 3'-SLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Xiong, X, Coombs, P.J, Martin, S.R, Liu, J, Xiao, H, McCauley, J.W, Locher, K, Walker, P.A, Collins, P.J, Kawaoka, Y, Skehel, J.J, Gamblin, S.J.
Deposit date:2013-03-29
Release date:2013-04-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Receptor Binding by a Ferret-Transmissible H5 Avian Influenza Virus
Nature, 497, 2013
4BGZ
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Crystal Structure of H5 (tyTy) Influenza Virus Haemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HAEMAGGLUTININ HA1, HEMAGGLUTININ, ...
Authors:Xiong, X, Coombs, P, Martin, S.R, Liu, J, Xiao, H, McCauley, J.W, Locher, K, Walker, P.A, Collins, P.J, Kawaoka, Y, Skehel, J.J, Gamblin, S.J.
Deposit date:2013-03-29
Release date:2013-04-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Receptor Binding by a Ferret-Transmissible H5 Avian Influenza Virus.
Nature, 497, 2013
4BH0
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BU of 4bh0 by Molmil
H5 (tyTy) Influenza Virus Haemagglutinin in Complex with Human Receptor Analogue 6'-SLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose, ...
Authors:Xiong, X, Coombs, P.J, Martin, S.R, Liu, J, Xiao, H, McCauley, J.W, Locher, K, Walker, P.A, Collins, P.J, Kawaoka, Y, Skehel, J.J, Gamblin, S.J.
Deposit date:2013-03-29
Release date:2013-04-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Receptor Binding by a Ferret-Transmissible H5 Avian Influenza Virus
Nature, 497, 2013
3VQU
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BU of 3vqu by Molmil
CRYSTAL STRUCTURE OF HUMAN MPS1 CATALYTIC DOMAIN IN COMPLEX WITH 4-[(4-amino-5-cyano-6-ethoxypyridin-2- yl)amino]benzamide
Descriptor: 4-[(4-amino-5-cyano-6-ethoxypyridin-2-yl)amino]benzamide, Dual specificity protein kinase TTK, IODIDE ION
Authors:Kusakabe, K, Ide, N, Daigo, Y, Itoh, T, Higashino, K, Okano, Y, Tadano, G, Tachibana, Y, Sato, Y, Inoue, M, Wada, T, Iguchi, M, Kanazawa, T, Ishioka, Y, Dohi, K, Tagashira, S, Kido, Y, Sakamoto, S, Yasuo, K, Maeda, M, Yamamoto, T, Higaki, M, Endoh, T, Ueda, K, Shiota, T, Murai, H, Nakamura, Y.
Deposit date:2012-03-30
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Diaminopyridine-based potent and selective mps1 kinase inhibitors binding to an unusual flipped-Peptide conformation.
Acs Med.Chem.Lett., 3, 2012
1V40
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BU of 1v40 by Molmil
First Inhibitor Complex Structure of Human Hematopoietic Prostaglandin D Synthase
Descriptor: 3-(1,3-BENZOTHIAZOL-2-YL)-2-(1,4-DIOXO-1,2,3,4-TETRAHYDROPHTHALAZIN-6-YL)-5-[(E)-2-PHENYLVINYL]-3H-TETRAAZOL-2-IUM, GLUTATHIONE, GLYCEROL, ...
Authors:Inoue, T, Okano, Y, Kado, Y, Aritake, K, Irikura, D, Uodome, N, Kinugasa, S, Okazaki, N, Matsumura, H, Kai, Y, Urade, Y.
Deposit date:2003-11-07
Release date:2004-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:First determination of the inhibitor complex structure of human hematopoietic prostaglandin D synthase.
J.Biochem.(Tokyo), 135, 2004
4MBU
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BU of 4mbu by Molmil
Crystal structure of N-acetyltransferase from Staphylococcus aureus Mu50
Descriptor: CADMIUM ION, PHOSPHATE ION, Similar to N-acetyltransferase
Authors:Srivastava, P, Khandokar, Y, Forwood, J.K.
Deposit date:2013-08-19
Release date:2014-09-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural characterization of a Gcn5-related N-acetyltransferase from Staphylococcus aureus.
Plos One, 9, 2014
3W1F
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BU of 3w1f by Molmil
Crystal structure of Human MPS1 catalytic domain in complex with 5-(5-ethoxy-6-(1-methyl-1H-pyrazol-4-yl)-1H-indazol-3-yl)-2-methylbenzenesulfonamide
Descriptor: 5-[5-ethoxy-6-(1-methyl-1H-pyrazol-4-yl)-1H-indazol-3-yl]-2-methylbenzenesulfonamide, Dual specificity protein kinase TTK
Authors:Kusakabe, K, Ide, N, Daigo, Y, Tachibana, Y, Itoh, T, Yamamoto, T, Hashizume, H, Hato, Y, Higashino, K, Okano, Y, Sato, Y, Inoue, M, Iguchi, M, Kanazawa, T, Ishioka, Y, Dohi, K, Kido, Y, Sakamoto, S, Yasuo, K, Maeda, M, Higaki, M, Ueda, K, Yoshizawa, H, Baba, Y, Shiota, T, Murai, H, Nakamura, Y.
Deposit date:2012-11-14
Release date:2013-06-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Indazole-based potent and cell-active Mps1 kinase inhibitors: rational design from pan-kinase inhibitor anthrapyrazolone (SP600125)
J.Med.Chem., 56, 2013

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