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PDB: 13 results

7WEM
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Solid-state NMR Structure of TFo c-Subunit Ring
Descriptor: ATP synthase subunit c
Authors:Akutsu, H, Todokoro, Y, Kang, S.-J, Suzuki, T, Yoshida, M, Ikegami, T, Fujiwara, T.
Deposit date:2021-12-23
Release date:2022-08-10
Last modified:2022-08-24
Method:SOLID-STATE NMR
Cite:Chemical Conformation of the Essential Glutamate Site of the c -Ring within Thermophilic Bacillus F o F 1 -ATP Synthase Determined by Solid-State NMR Based on its Isolated c -Ring Structure.
J.Am.Chem.Soc., 144, 2022
1J0O
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High Resolution Crystal Structure of the wild type Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
Descriptor: Cytochrome c3, ETHANOL, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ozawa, K, Yasukawa, F, Kumagai, J, Ohmura, T, Cusanvich, M.A, Tomimoto, Y, Ogata, H, Higuchi, Y, Akutsu, H.
Deposit date:2002-11-19
Release date:2003-11-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Role of the aromatic ring of Tyr43 in tetraheme cytochrome c(3) from Desulfovibrio vulgaris Miyazaki F.
Biophys.J., 85, 2003
1J0P
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Three dimensional Structure of the Y43L mutant of Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
Descriptor: Cytochrome c3, ETHANOL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Ozawa, K, Yasukawa, F, Kumagai, J, Ohmura, T, Cusanvich, M.A, Tomimoto, Y, Ogata, H, Higuchi, Y, Akutsu, H.
Deposit date:2002-11-19
Release date:2003-11-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (0.91 Å)
Cite:Role of the aromatic ring of Tyr43 in tetraheme cytochrome c(3) from Desulfovibrio vulgaris Miyazaki F.
Biophys.J., 85, 2003
1SNH
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Solution structure of the DNA Decamer Duplex Containing Double TG Mismatches of Cis-syn Cyclobutane Pyrimidine Dimer
Descriptor: 5'-D(*CP*GP*CP*AP*TP*TP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*TP*GP*GP*TP*GP*CP*G)-3'
Authors:Lee, J.H, Park, C.J, Shin, J.S, Ikegami, T, Akutsu, H, Choi, B.S.
Deposit date:2004-03-11
Release date:2004-05-18
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:NMR structure of the DNA decamer duplex containing double T*G mismatches of cis-syn cyclobutane pyrimidine dimer: implications for DNA damage recognition by the XPC-hHR23B complex.
Nucleic Acids Res., 32, 2004
2E5U
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C-terminal domain of Epsilon subunit of F1F0-ATP synthase from the Thermophilic Bacillus PS3
Descriptor: ATP synthase epsilon chain
Authors:Yagi, H, Akutsu, H.
Deposit date:2006-12-25
Release date:2007-07-10
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structures of the thermophilic F1-ATPase {varepsilon} subunit suggesting ATP-regulated arm motion of its C-terminal domain in F1
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E5Y
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Epsilon subunit and ATP complex of F1F0-ATP synthase from the Thermophilic Bacillus PS3
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain
Authors:Yagi, H, Akutsu, H.
Deposit date:2006-12-25
Release date:2007-07-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structures of the thermophilic F1-ATPase {varepsilon} subunit suggesting ATP-regulated arm motion of its C-terminal domain in F1
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E5T
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BU of 2e5t by Molmil
C-terminal domain of Epsilon subunit of F1F0-ATP synthase from the Thermophilic bacillus PS3 in the presence of ATP condition
Descriptor: ATP synthase epsilon chain
Authors:Yagi, H, Akutsu, H.
Deposit date:2006-12-22
Release date:2007-07-10
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structures of the thermophilic F1-ATPase {varepsilon} subunit suggesting ATP-regulated arm motion of its C-terminal domain in F1
Proc.Natl.Acad.Sci.Usa, 104, 2007
1WUZ
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Structure of EC1 domain of CNR
Descriptor: Pcdha4 protein
Authors:Morishita, H, Umitsu, M, Yamaguchi, T, Murata, Y, Shibata, N, Udaka, K, Higuchi, Y, Akutsu, H, Yagi, T, Ikegami, T.
Deposit date:2004-12-09
Release date:2005-12-13
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structural diversity of the first cadherin domains revealed by the structure of CNR/Protocadherin alpha
To be Published
1IT1
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BU of 1it1 by Molmil
Solution structures of ferrocytochrome c3 from Desulfovibrio vulgaris Miyazaki F
Descriptor: HEME C, cytochrome c3
Authors:Harada, E, Fukuoka, Y, Ohmura, T, Fukunishi, A, Kawai, G, Fujiwara, T, Akutsu, H.
Deposit date:2001-12-29
Release date:2002-07-10
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Redox-coupled conformational alternations in cytochrome c(3) from D. vulgaris Miyazaki F on the basis of its reduced solution structure.
J.Mol.Biol., 319, 2002
1WU0
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Solution structure of subunit c of F1Fo-ATP synthase from the thermophilic bacillus PS3
Descriptor: ATP synthase C chain
Authors:Nakano, T, Ikegami, T, Suzuki, T, Yoshida, M, Akutsu, H.
Deposit date:2004-11-29
Release date:2005-12-13
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:solution structure TF1Fo subunit c
To be Published
2CVC
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BU of 2cvc by Molmil
Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Hildenborough)
Descriptor: HEME C, High-molecular-weight cytochrome c precursor
Authors:Suto, K, Sato, M, Shibata, N, Kitamura, M, Morimoto, Y, Takayama, Y, Ozawa, K, Akutsu, H, Higuchi, Y, Yasuoka, N.
Deposit date:2005-06-02
Release date:2006-06-06
Last modified:2019-10-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of High-Molecular Weight Cytochrome c
To be Published
2CZP
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Structural analysis of membrane-bound mastoparan-X by solid-state NMR
Descriptor: Mastoparan X
Authors:Todokoro, Y, Fujiwara, T, Yumen, I, Fukushima, K, Kang, S.-W, Park, J.-S, Kohno, T, Wakamatsu, K, Akutsu, H.
Deposit date:2005-07-14
Release date:2006-07-04
Last modified:2022-03-09
Method:SOLID-STATE NMR
Cite:Structure of tightly membrane-bound mastoparan-x, a g-protein-activating Peptide, determined by solid-state NMR.
Biophys.J., 91, 2006
2D49
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Solution structure of the Chitin-Binding Domain of Streptomyces griseus Chitinase C
Descriptor: chitinase C
Authors:Akagi, K, Watanabe, J, Hara, M, Kezuka, Y, Chikaishi, E, Yamaguchi, T, Akutsu, H, Nonaka, T, Watanabe, T, Ikegami, T.
Deposit date:2005-10-11
Release date:2006-10-11
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Identification of the substrate interaction region of the chitin-binding domain of Streptomyces griseus chitinase C
J.Biochem.(Tokyo), 139, 2006

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