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PDB: 136 results

7B2B
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BU of 7b2b by Molmil
Solution structure of a non-covalent extended docking domain complex of the Pax NRPS: PaxA T1-CDD/PaxB NDD
Descriptor: Amino acid adenylation domain-containing protein, Peptide synthetase PaxA
Authors:Watzel, J, Sarawi, S, Duchardt-Ferner, E, Bode, H.B, Woehnert, J.
Deposit date:2020-11-26
Release date:2021-06-16
Last modified:2024-07-03
Method:SOLUTION NMR
Cite:Cooperation between a T Domain and a Minimal C-Terminal Docking Domain to Enable Specific Assembly in a Multiprotein NRPS.
Angew.Chem.Int.Ed.Engl., 60, 2021
7B2F
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BU of 7b2f by Molmil
Solution structure of the Pax NRPS docking domain PaxB NDD
Descriptor: Peptide synthetase XpsB (Modular protein)
Authors:Watzel, J, Sarawi, S, Duchardt-Ferner, E, Bode, H.B, Woehnert, J.
Deposit date:2020-11-26
Release date:2021-06-09
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Cooperation between a T Domain and a Minimal C-Terminal Docking Domain to Enable Specific Assembly in a Multiprotein NRPS.
Angew.Chem.Int.Ed.Engl., 60, 2021
5LWJ
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BU of 5lwj by Molmil
Solution NMR structure of the GTP binding Class II RNA aptamer-ligand-complex containing a protonated adenine nucleotide with a highly shifted pKa.
Descriptor: GTP Class II RNA (34-MER), GUANOSINE-5'-TRIPHOSPHATE
Authors:Wolter, A.C, Weickhmann, A.K, Nasiri, A.H, Hantke, K, Ohlenschlaeger, O, Wunderlich, C.H, Kreutz, C, Duchardt-Ferner, E, Woehnert, J.
Deposit date:2016-09-17
Release date:2016-12-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Stably Protonated Adenine Nucleotide with a Highly Shifted pKa Value Stabilizes the Tertiary Structure of a GTP-Binding RNA Aptamer.
Angew. Chem. Int. Ed. Engl., 56, 2017
1BL6
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BU of 1bl6 by Molmil
THE COMPLEX STRUCTURE OF THE MAP KINASE P38/SB216995
Descriptor: 4-(4-FLUOROPHENYL)-1-CYCLOROPROPYLMETHYL-5-(4-PYRIDYL)-IMIDAZOLE, PROTEIN (MAP KINASE P38)
Authors:Wang, Z, Canagarajah, B.J, Boehm, J.C, Kassis, S, Cobb, M.H, Young, P.R, Abdel-Meguid, S, Adams, J.L, Goldsmith, E.J.
Deposit date:1998-07-11
Release date:1999-07-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of inhibitor selectivity in MAP kinases.
Structure, 6, 1998
1BL7
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BU of 1bl7 by Molmil
THE COMPLEX STRUCTURE OF THE MAP KINASE P38/SB220025
Descriptor: 4-(4-FLUOROPHENYL)-1-(4-PIPERIDINYL)-5-(2-AMINO-4-PYRIMIDINYL)-IMIDAZOLE, PROTEIN (MAP KINASE P38)
Authors:Wang, Z, Canagarajah, B.J, Boehm, J.C, Kassis, S, Cobb, M.H, Young, P.R, Abdel-Meguid, S, Adams, J.L, Goldsmith, E.J.
Deposit date:1998-07-23
Release date:1999-07-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of inhibitor selectivity in MAP kinases.
Structure, 6, 1998
3E3U
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BU of 3e3u by Molmil
Crystal structure of Mycobacterium tuberculosis peptide deformylase in complex with inhibitor
Descriptor: N-[(2R)-2-{[(2S)-2-(1,3-benzoxazol-2-yl)pyrrolidin-1-yl]carbonyl}hexyl]-N-hydroxyformamide, NICKEL (II) ION, Peptide deformylase
Authors:Meng, W, Xu, M, Pan, S, Koehn, J.
Deposit date:2008-08-08
Release date:2009-01-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Peptide deformylase inhibitors of Mycobacterium tuberculosis: synthesis, structural investigations, and biological results.
Bioorg.Med.Chem.Lett., 18, 2008
3ERK
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BU of 3erk by Molmil
THE COMPLEX STRUCTURE OF THE MAP KINASE ERK2/SB220025
Descriptor: 4-(4-FLUOROPHENYL)-1-(4-PIPERIDINYL)-5-(2-AMINO-4-PYRIMIDINYL)-IMIDAZOLE, EXTRACELLULAR REGULATED KINASE 2
Authors:Wang, Z, Canagarajah, B, Boehm, J.C, Cobb, M.H, Young, P.R, Abdel-Meguid, S, Adams, J.L, Goldsmith, E.J.
Deposit date:1998-07-09
Release date:1999-07-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of inhibitor selectivity in MAP kinases.
Structure, 6, 1998
5M9N
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BU of 5m9n by Molmil
Crystal structure of human TDRD1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide
Descriptor: 1,2-ETHANEDIOL, E2F peptide, N3, ...
Authors:Tallant, C, Savitsky, P, Moehlenbrink, J, Chan, C, Nunez-Alonso, G, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Fedorov, O, La Thangue, N.B, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2016-11-01
Release date:2016-11-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of human TDRD1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide
To Be Published
7ABA
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BU of 7aba by Molmil
The structure of the Bottromycin biosynthetic protein SalCYP
Descriptor: HEME C, SalCYP
Authors:Adam, S, Koehnke, J.
Deposit date:2020-09-07
Release date:2020-12-02
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.85002315 Å)
Cite:Characterization of the Stereoselective P450 Enzyme BotCYP Enables the In Vitro Biosynthesis of the Bottromycin Core Scaffold.
J.Am.Chem.Soc., 142, 2020
5DYE
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BU of 5dye by Molmil
CRYSTAL STRUCTURE OF THE FULL LENGTH S156E MUTANT OF HUMAN AQUAPORIN 5
Descriptor: Aquaporin-5, O-[(S)-{[(2S)-2-(hexanoyloxy)-3-(tetradecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-D-serine
Authors:Kitchen, P, Oeberg, F, Sjoehamn, J, Hedfalk, K, Bill, R.M, Conner, A.C, Conner, M.T, Toernroth-Horsefield, S.
Deposit date:2015-09-24
Release date:2015-12-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Plasma Membrane Abundance of Human Aquaporin 5 Is Dynamically Regulated by Multiple Pathways.
Plos One, 10, 2015
5M9O
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BU of 5m9o by Molmil
Crystal structure of human SND1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide
Descriptor: E2F peptide, Staphylococcal nuclease domain-containing protein 1
Authors:Tallant, C, Savitsky, P, Moehlenbrink, J, Chan, C, Nunez-Alonso, G, Siejka, P, Sorrell, F.J, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Fedorov, O, La Thangue, N.B, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2016-11-01
Release date:2016-12-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of human SND1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide
To Be Published
6SAZ
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BU of 6saz by Molmil
Cleaved human fetuin-b in complex with crayfish astacin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Astacin, ...
Authors:Gomis-Ruth, F.X, Guevara, T, Cuppari, A, Korschgen, H, Schmitz, C, Kuske, M, Yiallouros, I, Floehr, J, Jahnen-Dechent, W, Stocker, W.
Deposit date:2019-07-18
Release date:2019-10-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:The C-terminal region of human plasma fetuin-B is dispensable for the raised-elephant-trunk mechanism of inhibition of astacin metallopeptidases.
Sci Rep, 9, 2019
6TET
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BU of 6tet by Molmil
The structure of CYP121 in complex with inhibitor L21
Descriptor: 1,2-ETHANEDIOL, 1-[(~{E})-3-[4-(4-fluorophenyl)phenyl]prop-2-enyl]imidazole, Mycocyclosin synthase, ...
Authors:Adam, S, Koehnke, J.
Deposit date:2019-11-12
Release date:2021-05-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.49986887 Å)
Cite:Structure-Activity Relationship and Mode-Of-Action Studies Highlight 1-(4-Biphenylylmethyl)-1H-imidazole-Derived Small Molecules as Potent CYP121 Inhibitors.
Chemmedchem, 16, 2021
8PKZ
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BU of 8pkz by Molmil
NMR solution structure of PilF-GSPIIB in the c-di-GMP bound state
Descriptor: ATP-binding motif-containing protein pilF, GUANOSINE-5'-MONOPHOSPHATE
Authors:Neissner, K, Woehnert, J.
Deposit date:2023-06-27
Release date:2024-07-10
Method:SOLUTION NMR
Cite:NMR solution structure of GSPIIB of Thermus thermophilus in the c-di-GMP bound state
To Be Published
8PQU
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BU of 8pqu by Molmil
NMR structure of the Thermus thermophilus PilF-GSPIIB domain in the apo state
Descriptor: ATP-binding motif-containing protein pilF
Authors:Neissner, K, Woehnert, J.
Deposit date:2023-07-12
Release date:2024-07-24
Method:SOLUTION NMR
Cite:NMR structure of the Thermus thermophilus PilF-GSPIIB domain in the apo state
To Be Published
3BL8
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BU of 3bl8 by Molmil
Crystal structure of the extracellular domain of neuroligin 2A from mouse
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Neuroligin-2, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Jin, X, Koehnke, J, Shapiro, L.
Deposit date:2007-12-10
Release date:2008-02-19
Last modified:2021-03-31
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of the extracellular cholinesterase-like domain from neuroligin-2.
Proc.Natl.Acad.Sci.Usa, 105, 2008
6S10
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BU of 6s10 by Molmil
NMR solution structure of a ProQ homolog from Legionella pneumophila
Descriptor: RNA chaperone ProQ
Authors:Immer, C, Hacker, C, Woehnert, J.
Deposit date:2019-06-18
Release date:2020-07-08
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution structure and RNA-binding of a minimal ProQ-homolog from Legionella pneumophila (Lpp1663).
Rna, 26, 2020
6Z8L
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BU of 6z8l by Molmil
Alpha-Amylase in complex with probe fragments
Descriptor: CALCIUM ION, CHLORIDE ION, Pancreatic alpha-amylase, ...
Authors:Adam, S, Koehnke, J.
Deposit date:2020-06-02
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.40000367 Å)
Cite:Enhancing glycan stability via site-selective fluorination: modulating substrate orientation by molecular design.
Chem Sci, 12, 2020
6TEV
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BU of 6tev by Molmil
The structure of CYP121 in complex with inhibitor L44
Descriptor: 1,2-ETHANEDIOL, 1-[[4-[4-(trifluoromethyl)phenyl]phenyl]methyl]imidazole, Mycocyclosin synthase, ...
Authors:Adam, S, Koehnke, J.
Deposit date:2019-11-12
Release date:2021-05-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.70001268 Å)
Cite:Structure-Activity Relationship and Mode-Of-Action Studies Highlight 1-(4-Biphenylylmethyl)-1H-imidazole-Derived Small Molecules as Potent CYP121 Inhibitors.
Chemmedchem, 16, 2021
6TE7
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BU of 6te7 by Molmil
The structure of CYP121 in complex with inhibitor S2
Descriptor: 1,2-ETHANEDIOL, 2-chloranyl-4-[4-[(1~{R})-1-imidazol-1-ylprop-2-enyl]phenyl]phenol, Mycocyclosin synthase, ...
Authors:Adam, S, Koehnke, J.
Deposit date:2019-11-11
Release date:2021-05-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.50001824 Å)
Cite:Structure-Activity Relationship and Mode-Of-Action Studies Highlight 1-(4-Biphenylylmethyl)-1H-imidazole-Derived Small Molecules as Potent CYP121 Inhibitors.
Chemmedchem, 16, 2021
6I86
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BU of 6i86 by Molmil
Crocagin biosynthetic gene J
Descriptor: GLYCEROL, Uncharacterized protein
Authors:Adam, S, Koehnke, J.
Deposit date:2018-11-19
Release date:2019-03-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of CgnJ, a domain of unknown function protein from the crocagin gene cluster.
Acta Crystallogr.,Sect.F, 75, 2019
8AHD
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BU of 8ahd by Molmil
The apo structure of the Corramycin phosphotransferase
Descriptor: Corramycin phosphotransferase, GLYCEROL
Authors:Adam, S, Mueller, R, Koehnke, J.
Deposit date:2022-07-21
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The apo structure of the Corramycin phosphotransferase
To Be Published
8AGY
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BU of 8agy by Molmil
The Corramycin phosphotransferase in complex with Corramycin
Descriptor: ABCD, Corramycin phosphotransferase, GLYCEROL
Authors:Adam, S, Mueller, R, Koehnke, J.
Deposit date:2022-07-20
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Corramycin phosphotransferase in complex with Corramycin
To Be Published
4BG2
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BU of 4bg2 by Molmil
X-ray Crystal Structure of PatF from Prochloron didemni
Descriptor: PATF
Authors:Bent, A.F, Koehnke, J, Houssen, W.E, Smith, M.C.M, Jaspars, M, Naismith, J.H.
Deposit date:2013-03-22
Release date:2013-04-03
Last modified:2013-11-06
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structure of Patf from Prochloron Didemni.
Acta Crystallogr.,Sect.F, 69, 2013
8A2N
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BU of 8a2n by Molmil
Structure of crocagin biosynthetic protein CgnD
Descriptor: CgnD, SULFATE ION
Authors:Adam, S, Koehnke, J.
Deposit date:2022-06-06
Release date:2023-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Unusual peptide-binding proteins guide pyrroloindoline alkaloid formation in crocagin biosynthesis.
Nat.Chem., 15, 2023

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