Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 7430 results

3IFS
DownloadVisualize
BU of 3ifs by Molmil
2.0 Angstrom Resolution Crystal Structure of Glucose-6-phosphate Isomerase (pgi) from Bacillus anthracis.
Descriptor: CHLORIDE ION, Glucose-6-phosphate isomerase, LITHIUM ION, ...
Authors:Minasov, G, Wawrzak, Z, Onopriyenko, O, Gordon, E, Peterson, S.N, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-07-24
Release date:2009-08-11
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:2.0 Angstrom Resolution Crystal Structure of Glucose-6-phosphate Isomerase (pgi) from Bacillus anthracis.
To be Published
4UN3
DownloadVisualize
BU of 4un3 by Molmil
Crystal structure of Cas9 bound to PAM-containing DNA target
Descriptor: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1, MAGNESIUM ION, NON-TARGET DNA STRAND, ...
Authors:Anders, C, Niewoehner, O, Duerst, A, Jinek, M.
Deposit date:2014-05-25
Release date:2014-07-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.593 Å)
Cite:Structural Basis of Pam-Dependent Target DNA Recognition by the Cas9 Endonuclease
Nature, 513, 2014
1SU6
DownloadVisualize
BU of 1su6 by Molmil
Carbon monoxide dehydrogenase from Carboxydothermus hydrogenoformans: CO reduced state
Descriptor: Carbon monoxide dehydrogenase 2, FE(4)-NI(1)-S(5) CLUSTER, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Dobbek, H, Svetlitchnyi, V, Liss, J, Meyer, O.
Deposit date:2004-03-26
Release date:2004-05-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Carbon Monoxide Induced Decomposition of the Active Site [Ni-4Fe-5S] Cluster of CO Dehydrogenase
J.Am.Chem.Soc., 126, 2004
6JOO
DownloadVisualize
BU of 6joo by Molmil
Crystal structure of Corynebacterium diphtheriae Cas9 in complex with sgRNA and target DNA
Descriptor: 1,2-ETHANEDIOL, CRISPR-associated protein,CRISPR-associated endonuclease Cas9, Guide RNA, ...
Authors:Hirano, S, Ishitani, R, Nishimasu, H, Nureki, O.
Deposit date:2019-03-22
Release date:2019-04-17
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for the promiscuous PAM recognition by Corynebacterium diphtheriae Cas9.
Nat Commun, 10, 2019
5LB8
DownloadVisualize
BU of 5lb8 by Molmil
Crystal structure of human RECQL5 helicase APO form.
Descriptor: ATP-dependent DNA helicase Q5, ZINC ION
Authors:Newman, J.A, Aitkenhead, H, Savitsky, P, Krojer, T, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O, Structural Genomics Consortium (SGC)
Deposit date:2016-06-15
Release date:2016-07-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Insights into the RecQ helicase mechanism revealed by the structure of the helicase domain of human RECQL5.
Nucleic Acids Res., 45, 2017
1T2P
DownloadVisualize
BU of 1t2p by Molmil
Crystal structure of Sortase A from Staphylococcus aureus
Descriptor: sortase
Authors:Zong, Y, Bice, T.W, Ton-That, H, Schneewind, O, Narayana, S.V.
Deposit date:2004-04-22
Release date:2004-09-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:CRYSTAL STRUCTURES OF STAPHYLOCOCCUS AUREUS SORTASE A AND ITS SUBSTRATE COMPLEX
J.Biol.Chem., 279, 2004
4V7F
DownloadVisualize
BU of 4v7f by Molmil
Arx1 pre-60S particle.
Descriptor: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Leidig, C, Thoms, M, Holdermann, I, Bradatsch, B, Berninghausen, O, Bange, G, Sinning, I, Hurt, E, Beckmann, R.
Deposit date:2013-12-10
Release date:2014-07-09
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (8.7 Å)
Cite:60S ribosome biogenesis requires rotation of the 5S ribonucleoprotein particle.
Nat Commun, 5, 2014
4UTQ
DownloadVisualize
BU of 4utq by Molmil
A structural model of the active ribosome-bound membrane protein insertase YidC
Descriptor: ATP SYNTHASE SUBUNIT C, MEMBRANE PROTEIN INSERTASE YIDC
Authors:Wickles, S, Singharoy, A, Andreani, J, Seemayer, S, Bischoff, L, Berninghausen, O, Soeding, J, Schulten, K, vanderSluis, E.O, Beckmann, R.
Deposit date:2014-07-22
Release date:2014-07-30
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8 Å)
Cite:A Structural Model of the Active Ribosome-Bound Membrane Protein Insertase Yidc.
Elife, 3, 2014
5LB5
DownloadVisualize
BU of 5lb5 by Molmil
Crystal structure of human RECQL5 helicase in complex with ADP/Mg (tricilinc form).
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase Q5, DIMETHYL SULFOXIDE, ...
Authors:Newman, J.A, Aitkenhead, H, Savitsky, P, Krojer, T, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O, Structural Genomics Consortium (SGC)
Deposit date:2016-06-15
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into the RecQ helicase mechanism revealed by the structure of the helicase domain of human RECQL5.
Nucleic Acids Res., 45, 2017
3AQ1
DownloadVisualize
BU of 3aq1 by Molmil
Open state monomer of a group II chaperonin from methanococcoides burtonii
Descriptor: Thermosome subunit
Authors:Harrop, S.J, Pilak, O, Siddiqui, K.S, De Francisci, D, Burg, D, Williams, T.J, Cavicchioli, R, Curmi, P.M.
Deposit date:2010-10-24
Release date:2011-09-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.746 Å)
Cite:Chaperonins from an Antarctic archaeon are predominantly monomeric: crystal structure of an open state monomer.
ENVIRON.MICROBIOL., 13, 2011
4V6W
DownloadVisualize
BU of 4v6w by Molmil
Structure of the D. melanogaster 80S ribosome
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 2S ribosomal RNA, ...
Authors:Anger, A.M, Armache, J.-P, Berninghausen, O, Habeck, M, Subklewe, M, Wilson, D.N, Beckmann, R.
Deposit date:2013-02-27
Release date:2014-07-09
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Structures of the human and Drosophila 80S ribosome.
Nature, 497, 2013
3I38
DownloadVisualize
BU of 3i38 by Molmil
Structure of a putative chaperone protein dnaj from klebsiella pneumoniae subsp. pneumoniae mgh 78578
Descriptor: Putative chaperone DnaJ
Authors:Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Bearden, J, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-06-30
Release date:2009-07-14
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a Putative Chaperone Protein Dnaj from Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578
To be Published
6JMQ
DownloadVisualize
BU of 6jmq by Molmil
LAT1-CD98hc complex bound to MEM-108 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4F2 cell-surface antigen heavy chain, ...
Authors:Lee, Y, Nishizawa, T, Kusakizako, T, Oda, K, Ishitani, R, Nakane, T, Nureki, O.
Deposit date:2019-03-13
Release date:2019-06-19
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:Cryo-EM structure of the human L-type amino acid transporter 1 in complex with glycoprotein CD98hc.
Nat.Struct.Mol.Biol., 26, 2019
6JKD
DownloadVisualize
BU of 6jkd by Molmil
Crystal structure of tetrameric PepTSo2 in I4 space group
Descriptor: Proton:oligopeptide symporter POT family
Authors:Nagamura, R, Fukuda, M, Ishitani, R, Nureki, O.
Deposit date:2019-02-28
Release date:2019-05-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structural basis for oligomerization of the prokaryotic peptide transporter PepTSo2.
Acta Crystallogr.,Sect.F, 75, 2019
6JO1
DownloadVisualize
BU of 6jo1 by Molmil
Structure of the CYP102A1 Haem Domain with N-(S)-Ibuprofenoyl-L-Phenylalanine
Descriptor: (2S)-2-[[(2S)-2-[4-(2-methylpropyl)phenyl]propanoyl]amino]-3-phenyl-propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, DIMETHYL SULFOXIDE, ...
Authors:Stanfield, J.K, Kasai, C, Sugimoto, H, Shiro, Y, Watanabe, Y, Shoji, O.
Deposit date:2019-03-19
Release date:2020-03-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystals in Minutes: Instant On-Site Microcrystallisation of Various Flavours of the CYP102A1 (P450BM3) Haem Domain.
Angew.Chem.Int.Ed.Engl., 59, 2020
1T6D
DownloadVisualize
BU of 1t6d by Molmil
MIRAS phasing of the Aquifex aeolicus Ppx/GppA phosphatase: crystal structure of the type II variant
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, exopolyphosphatase
Authors:Kristensen, O, Laurberg, M, Liljas, A, Kastrup, J.S, Gajhede, M.
Deposit date:2004-05-06
Release date:2004-08-03
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural characterization of the stringent response related exopolyphosphatase/guanosine pentaphosphate phosphohydrolase protein family
Biochemistry, 43, 2004
5LC9
DownloadVisualize
BU of 5lc9 by Molmil
Structure of Polyphosphate Kinase from Meiothermus ruber Apo-form
Descriptor: PHOSPHATE ION, Polyphosphate:AMP phosphotransferase, SULFATE ION
Authors:Kemper, F, Einsle, O, Gerhardt, S.
Deposit date:2016-06-20
Release date:2017-06-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Substrate recognition and mechanism revealed by ligand-bound polyphosphate kinase 2 structures.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3IMF
DownloadVisualize
BU of 3imf by Molmil
1.99 Angstrom resolution crystal structure of a short chain dehydrogenase from Bacillus anthracis str. 'Ames Ancestor'
Descriptor: ACETATE ION, Short chain dehydrogenase
Authors:Halavaty, A.S, Minasov, G, Skarina, T, Onopriyenko, O, Gordon, E, Peterson, S, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-08-10
Release date:2009-08-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:1.99 Angstrom resolution crystal structure of a short chain dehydrogenase from Bacillus anthracis str. 'Ames Ancestor'
To be Published
6JS8
DownloadVisualize
BU of 6js8 by Molmil
Structure of the CYP102A1 Haem Domain with N-Dehydroabietoyl-L-Tryptophan
Descriptor: (2S)-2-[[(1R,4aS,10aR)-1,4a-dimethyl-7-propan-2-yl-2,3,4,9,10,10a-hexahydrophenanthren-1-yl]carbonylamino]-3-(1H-indol-3-yl)propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, DIMETHYL SULFOXIDE, ...
Authors:Stanfield, J.K, Kasai, C, Sugimoto, H, Shiro, Y, Watanabe, Y, Shoji, O.
Deposit date:2019-04-07
Release date:2020-03-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Crystals in Minutes: Instant On-Site Microcrystallisation of Various Flavours of the CYP102A1 (P450BM3) Haem Domain.
Angew.Chem.Int.Ed.Engl., 59, 2020
3INZ
DownloadVisualize
BU of 3inz by Molmil
H57T Hfq from Pseudomonas aeruginosa
Descriptor: CADMIUM ION, CHLORIDE ION, Protein hfq, ...
Authors:Moskaleva, O, Melnik, B, Gabdulkhakov, A, Garber, M, Nikonov, S, Stolboushkina, E, Nikulin, A.
Deposit date:2009-08-13
Release date:2010-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structures of mutant forms of Hfq from Pseudomonas aeruginosa reveal the importance of the conserved His57 for the protein hexamer organization.
Acta Crystallogr.,Sect.F, 66, 2010
1VC3
DownloadVisualize
BU of 1vc3 by Molmil
Crystal Structure of L-Aspartate-alpha-Decarboxylase
Descriptor: L-Aspartate-alpha-Decarboxylase heavy chain, L-Aspartate-alpha-Decarboxylase light chain
Authors:Nakajima, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-04
Release date:2005-06-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of L-Aspartate-alpha-Decarboxylase
TO BE PUBLISHED
5LH4
DownloadVisualize
BU of 5lh4 by Molmil
Trypsin inhibitors for the treatment of pancreatitis - cpd 1
Descriptor: (2~{S},4~{S})-1-[4-(aminomethyl)phenyl]carbonyl-4-(4-cyclopropyl-1,2,3-triazol-1-yl)-~{N}-(2,2-diphenylethyl)pyrrolidine-2-carboxamide, CALCIUM ION, Cationic trypsin, ...
Authors:Schiering, N, D'Arcy, A, Skaanderup, P, Simic, O, Brandl, T, Woelcke, J.
Deposit date:2016-07-08
Release date:2018-01-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Trypsin inhibitors for the treatment of pancreatitis.
Bioorg. Med. Chem. Lett., 26, 2016
5LKA
DownloadVisualize
BU of 5lka by Molmil
Crystal structure of haloalkane dehalogenase LinB 140A+143L+177W+211L mutant (LinB86) from Sphingobium japonicum UT26 at 1.3 A resolution
Descriptor: Haloalkane dehalogenase, THIOCYANATE ION
Authors:Degtjarik, O, Rezacova, P, Iermak, I, Chaloupkova, R, Damborsky, J, Kuta Smatanova, I.
Deposit date:2016-07-21
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.298 Å)
Cite:Engineering a de novo transport tunnel.
Acs Catalysis, 2016
1V33
DownloadVisualize
BU of 1v33 by Molmil
Crystal structure of DNA primase from Pyrococcus horikoshii
Descriptor: DNA primase small subunit, PHOSPHATE ION, ZINC ION
Authors:Ito, N, Nureki, O, Shirouzu, M, Yokoyama, S, Hanaoka, F, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-25
Release date:2004-03-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the Pyrococcus horikoshii DNA primase-UTP complex: implications for the mechanism of primer synthesis.
Genes Cells, 8, 2003
3DR3
DownloadVisualize
BU of 3dr3 by Molmil
Structure of IDP00107, a potential N-acetyl-gamma-glutamylphosphate reductase from Shigella flexneri
Descriptor: D-MALATE, N-acetyl-gamma-glutamyl-phosphate reductase, SODIUM ION
Authors:Singer, A.U, Skarina, T, Onopriyenko, O, Edwards, A.M, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2008-07-10
Release date:2008-08-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of IDP00107, a potential N-acetyl-gamma-glutamylphosphate reductase from Shigella flexneri
To be Published

224931

건을2024-09-11부터공개중

PDB statisticsPDBj update infoContact PDBjnumon