Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 7397 results

4B9P
DownloadVisualize
BU of 4b9p by Molmil
Biomass sensoring module from putative Rsgi2 protein of Clostridium thermocellum resemble family 3 carbohydrate-binding module of cellulosome
Descriptor: CALCIUM ION, TYPE 3A CELLULOSE-BINDING DOMAIN PROTEIN, ZINC ION
Authors:Yaniv, O, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
Deposit date:2012-09-06
Release date:2013-09-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.182 Å)
Cite:Fine-Structural Variance of Family 3 Carbohydrate-Binding Modules as Extracellular Biomass-Sensing Components of Clostridium Thermocellum Anti-Sigma(I) Factors.
Acta Crystallogr.,Sect.D, 70, 2014
4BDQ
DownloadVisualize
BU of 4bdq by Molmil
Crystal structure of the GluK2 R775A LBD dimer in complex with glutamate
Descriptor: GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 2, GLUTAMIC ACID, ...
Authors:Nayeem, N, Mayans, O, Green, T.
Deposit date:2012-10-05
Release date:2013-04-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Correlating Efficacy and Desensitization with Gluk2 Ligand-Binding Domain Movements.
Open Biol., 3, 2013
4AVM
DownloadVisualize
BU of 4avm by Molmil
Crystal structure of the N-BAR domain of human bridging integrator 2.
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BRIDGING INTEGRATOR 2
Authors:Allerston, C.K, Krojer, T, Cooper, C.D.O, Vollmar, M, Arrowsmith, C.H, Edwards, A, Bountra, C, von Delft, F, Gileadi, O.
Deposit date:2012-05-28
Release date:2012-06-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal Structure of the N-Bar Domain of Human Bridging Integrator 2.
To be Published
4BHN
DownloadVisualize
BU of 4bhn by Molmil
Crystal Structures of Ask1-inhibitor Complexes
Descriptor: 4-tert-butyl-N-[6-(1H-pyrazol-4-yl)imidazo[1,2-a]pyridin-2-yl]benzamide, GLYCEROL, MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5
Authors:Singh, O, Shillings, A, Craggs, P, Wall, I, Rowland, P, Skarzynski, T, Hobbs, C.I, Hardwick, P, Tanner, R, Blunt, M, Witty, D.R, Smith, K.J.
Deposit date:2013-04-04
Release date:2013-07-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Ask1-Inhibtor Complexes Provide a Platform for Structure Based Drug Design.
Protein Sci., 22, 2013
4BIC
DownloadVisualize
BU of 4bic by Molmil
Crystal Structures of Ask1-inhibitor Complexes
Descriptor: GLYCEROL, MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5, N-(2-aminoethyl)-5-{1H-pyrrolo[2,3-b]pyridin-3-yl}thiophene-2-sulfonamide
Authors:Singh, O, Shillings, A, Craggs, P, Wall, I, Rowland, P, Skarzynski, T, Hobbs, C.I, Hardwick, P, Tanner, R, Blunt, M, Witty, D.R, Smith, K.J.
Deposit date:2013-04-10
Release date:2013-07-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Crystal Structures of Ask1-Inhibtor Complexes Provide a Platform for Structure Based Drug Design.
Protein Sci., 22, 2013
4BLI
DownloadVisualize
BU of 4bli by Molmil
Galectin-3c in complex with Bisamido-thiogalactoside derivate 1
Descriptor: (3-Deoxy-3-(3-methoxy-benzamido)-b-D-galactopyranosyl)-(3-deoxy-3-(3-methoxy-benzamido)-2-O-sulfo-b-D-galactopyranosyl)-sulfide, GALECTIN-3
Authors:Noresson, A.L, Oberg, C.T, Engstrom, O, Hakansson, M, Logan, D.T, Leffler, H, Nilsson, U.J.
Deposit date:2013-05-03
Release date:2014-05-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Controlling Protein Conformation Through Electronic Fine-Tuning of Arginine-Arene Interactions: Synthetic, Structural, and Biological Studies
To be Published
4B60
DownloadVisualize
BU of 4b60 by Molmil
Structure of rFnBPA(189-505) in complex with fibrinogen gamma chain C- terminal peptide
Descriptor: CALCIUM ION, FIBRINOGEN GAMMA CHAIN, FIBRONECTIN-BINDING PROTEIN A
Authors:Stemberk, V, Moroz, O, Atkin, K.E, Turkenburg, J.P, Potts, J.R.
Deposit date:2012-08-08
Release date:2013-10-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Evidence for Steric Regulation of Fibrinogen Binding to Staphylococcus Aureus Fibronectin-Binding Protein a (Fnbpa).
J.Biol.Chem., 289, 2014
4D1U
DownloadVisualize
BU of 4d1u by Molmil
A D120A mutant of VIM-7 from Pseudomonas aeruginosa
Descriptor: METALLO-B-LACTAMASE, ZINC ION
Authors:Leiros, H.-K.S, Skagseth, S, Edvardsen, K.S.W, Lorentzen, M.S, Bjerga, G.E.K, Leiros, I, Samuelsen, O.
Deposit date:2014-05-05
Release date:2014-06-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:His224 Alters the R2 Drug Binding Site and Phe218 Influences the Catalytic Efficiency in the Metallo-Beta-Lactamase Vim-7.
Antimicrob.Agents Chemother., 58, 2014
4CZY
DownloadVisualize
BU of 4czy by Molmil
Complex of Neurospora crassa PAN2 (WD40-CS1) with PAN3 (pseudokinase and C-term)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, PAB-DEPENDENT POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN2, ...
Authors:Jonas, S, Izaurralde, E, Weichenrieder, O.
Deposit date:2014-04-22
Release date:2014-06-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:An Asymmetric Pan3 Dimer Recruits a Single Pan2 Exonuclease to Mediate Mrna Deadenylation and Decay.
Nat.Struct.Mol.Biol., 21, 2014
4CZB
DownloadVisualize
BU of 4czb by Molmil
Structure of the sodium proton antiporter MjNhaP1 from Methanocaldococcus jannaschii at pH 8.
Descriptor: NA(+)/H(+) ANTIPORTER 1, POTASSIUM ION, TRIS(HYDROXYETHYL)AMINOMETHANE
Authors:Woehlert, D, Paulino, C, Kapotova, E, Kuhlbrandt, W, Yildiz, O.
Deposit date:2014-04-16
Release date:2014-12-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:3D Em Map of the Sodium Proton Antiporter Mjnhap1 from Methanocaldococcus Jannaschii
Elife, 3, 2014
4D0M
DownloadVisualize
BU of 4d0m by Molmil
Phosphatidylinositol 4-kinase III beta in a complex with Rab11a-GTP- gamma-S and the Rab-binding domain of FIP3
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, N-(5-(4-CHLORO-3-(2-HYDROXY-ETHYLSULFAMOYL)- PHENYLTHIAZOLE-2-YL)-ACETAMIDE, ...
Authors:Burke, J.E, Inglis, A.J, Perisic, O, Masson, G.R, McLaughlin, S.H, Rutaganira, F, Shokat, K.M, Williams, R.L.
Deposit date:2014-04-29
Release date:2014-05-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (6 Å)
Cite:Structures of Pi4Kiiibeta Complexes Show Simultaneous Recruitment of Rab11 and its Effectors.
Science, 344, 2014
4D0K
DownloadVisualize
BU of 4d0k by Molmil
Complex of Chaetomium thermophilum PAN2 (WD40-CS1) with PAN3 (C-term)
Descriptor: A-SPECIFIC RIBONUCLEASE SUBUNIT PAN2, PAB-DEPENDENT POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3-LIKE PROTEIN
Authors:Jonas, S, Izaurralde, E, Weichenrieder, O.
Deposit date:2014-04-28
Release date:2014-06-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:An Asymmetric Pan3 Dimer Recruits a Single Pan2 Exonuclease to Mediate Mrna Deadenylation and Decay.
Nat.Struct.Mol.Biol., 21, 2014
4D1T
DownloadVisualize
BU of 4d1t by Molmil
High resolution structure of native tVIM-7 from Pseudomonas aeruginosa
Descriptor: METALLO-B-LACTAMASE, ZINC ION
Authors:Leiros, H.-K.S, Skagseth, S, Edvardsen, K.S.W, Lorentzen, M.S, Bjerga, G.E.K, Leiros, I, Samuelsen, O.
Deposit date:2014-05-05
Release date:2014-06-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:His224 Alters the R2 Drug Binding Site and Phe218 Influences the Catalytic Efficiency in the Metallo-Beta-Lactamase Vim-7.
Antimicrob.Agents Chemother., 58, 2014
4D1V
DownloadVisualize
BU of 4d1v by Molmil
A F218Y mutant of VIM-7 from Pseudomonas aeruginosa
Descriptor: METALLO-B-LACTAMASE, ZINC ION
Authors:Leiros, H.-K.S, Skagseth, S, Edvardsen, K.S.W, Lorentzen, M.S, Bjerga, G.E.K, Leiros, I, Samuelsen, O.
Deposit date:2014-05-05
Release date:2014-06-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:His224 Alters the R2 Drug Binding Site and Phe218 Influences the Catalytic Efficiency in the Metallo-Beta-Lactamase Vim-7.
Antimicrob.Agents Chemother., 58, 2014
4CB7
DownloadVisualize
BU of 4cb7 by Molmil
Structure of Influenza A H5N1 PB2 cap-binding domain with bound cap analogue (compound 8e)
Descriptor: 5-[2-(2-azanyl-7-methyl-6-oxidanylidene-1H-purin-9-ium-9-yl)ethanoyl]-2-oxidanyl-benzoic acid, GLYCEROL, POLYMERASE BASIC SUBUNIT 2
Authors:Pautus, S, Sehr, P, Lewis, J, Fortune, A, Wolkerstorfer, A, Szolar, O, Gulligay, D, Lunardi, T, Decout, J.L, Cusack, S.
Deposit date:2013-10-10
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:New 7-Methyl-Guanosine Derivatives Targeting the Influenza Polymerase Pb2 CAP-Binding Domain
J.Med.Chem., 56, 2013
4CBK
DownloadVisualize
BU of 4cbk by Molmil
The c-ring ion binding site of the ATP synthase from Bacillus pseudofirmus OF4 is adapted to alkaliphilic cell physiology
Descriptor: ATP SYNTHASE SUBUNIT C, DODECYL-BETA-D-MALTOSIDE, SODIUM ION, ...
Authors:Preiss, L, Yildiz, O, Meier, T.
Deposit date:2013-10-14
Release date:2014-04-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:The C-Ring Ion-Binding Site of the ATP Synthase from Bacillus Pseudofirmus of4 is Adapted to Alkaliphilic Lifestyle.
Mol.Microbiol., 92, 2014
4C8Z
DownloadVisualize
BU of 4c8z by Molmil
Cas6 (TTHA0078) product complex
Descriptor: CAS6A, POTASSIUM ION, R1 REPEAT RNA CLEAVAGE PRODUCT, ...
Authors:Jinek, M, Niewoehner, O, Doudna, J.A.
Deposit date:2013-10-02
Release date:2013-11-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Evolution of Crispr RNA Recognition and Processing by Cas6 Endonucleases.
Nucleic Acids Res., 42, 2014
4BLJ
DownloadVisualize
BU of 4blj by Molmil
Galectin-3c in complex with Bisamido-thiogalactoside derivate 2
Descriptor: Bis-(3-deoxy-3-(3-methoxy-benzamido)-b-D-galactopyranosyl)-sulfide, GALECTIN-3
Authors:Noresson, A.L, Oberg, C.T, Engstrom, O, Hakansson, M, Logan, D.T, Leffler, H, Nilsson, U.J.
Deposit date:2013-05-03
Release date:2014-05-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Controlling Protein Conformation Through Electronic Fine-Tuning of Arginine-Arene Interactions: Synthetic, Structural, and Biological Studies
To be Published
4AYW
DownloadVisualize
BU of 4ayw by Molmil
STRUCTURE OF THE HUMAN MITOCHONDRIAL ABC TRANSPORTER, ABCB10 (PLATE FORM)
Descriptor: ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10, CHOLESTEROL HEMISUCCINATE, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Pike, A.C.W, Shintre, C.A, Li, Q, Kim, J, von Delft, F, Barr, A.J, Das, S, Chaikuad, A, Xia, X, Quigley, A, Dong, Y, Dong, L, Krojer, T, Vollmar, M, Muniz, J.R.C, Bray, J.E, Berridge, G, Chalk, R, Gileadi, O, Burgess-Brown, N, Shrestha, L, Goubin, S, Yang, J, Mahajan, P, Mukhopadhyay, S, Bullock, A.N, Arrowsmith, C.H, Weigelt, J, Bountra, C, Edwards, A.M, Carpenter, E.P.
Deposit date:2012-06-22
Release date:2012-07-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structures of Abcb10, a Human ATP-Binding Cassette Transporter in Apo- and Nucleotide-Bound States
Proc.Natl.Acad.Sci.USA, 110, 2013
4B96
DownloadVisualize
BU of 4b96 by Molmil
Family 3b carbohydrate-binding module from the biomass sensoring system of Clostridium clariflavum
Descriptor: CALCIUM ION, CELLULOSE BINDING DOMAIN-CONTAINING PROTEIN, CHLORIDE ION
Authors:Yaniv, O, Reddy, Y.H.K, Yoffe, H, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
Deposit date:2012-09-02
Release date:2013-09-18
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.911 Å)
Cite:Structure of Cbm3B from the Biomass Sensoring System of Clostridium Clarifalvum
To be Published
4BBQ
DownloadVisualize
BU of 4bbq by Molmil
Crystal structure of the CXXC and PHD domain of Human Lysine-specific Demethylase 2A (KDM2A)(FBXL11)
Descriptor: 1,2-ETHANEDIOL, LYSINE-SPECIFIC DEMETHYLASE 2A, ZINC ION
Authors:Allerston, C.K, Watson, A.A, Edlich, C, Li, B, Chen, Y, Ball, L, Krojer, T, Arrowsmith, C.H, Edwards, A, Bountra, C, von Delft, F, Laue, E.D, Gileadi, O.
Deposit date:2012-09-27
Release date:2012-10-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal Structure of the Cxxc and Phd Domain of Human Lysine-Specific Demethylase 2A (Kdm2A)(Fbxl11)
To be Published
4D49
DownloadVisualize
BU of 4d49 by Molmil
Crystal structure of computationally designed armadillo repeat proteins for modular peptide recognition.
Descriptor: ARGININE, ARMADILLO REPEAT PROTEIN ARM00027, POLY ARG DECAPEPTIDE
Authors:Reichen, C, Forzani, C, Zhou, T, Parmeggiani, F, Fleishman, S.J, Mittl, P.R.E, Madhurantakam, C, Honegger, A, Ewald, C, Zerbe, O, Baker, D, Caflisch, A, Pluckthun, A.
Deposit date:2014-10-27
Release date:2016-01-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Computationally Designed Armadillo Repeat Proteins for Modular Peptide Recognition.
J.Mol.Biol., 428, 2016
4D4E
DownloadVisualize
BU of 4d4e by Molmil
Crystal structure of computationally designed armadillo repeat proteins for modular peptide recognition.
Descriptor: ARMADILLO REPEAT PROTEIN ARM00016, GLYCEROL
Authors:Reichen, C, Forzani, C, Zhou, T, Parmeggiani, F, Fleishman, S.J, Mittl, P.R.E, Madhurantakam, C, Honegger, A, Ewald, C, Zerbe, O, Baker, D, Caflisch, A, Pluckthun, A.
Deposit date:2014-10-28
Release date:2016-01-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Computationally Designed Armadillo Repeat Proteins for Modular Peptide Recognition.
J.Mol.Biol., 428, 2016
4DBR
DownloadVisualize
BU of 4dbr by Molmil
Myosin VI D179Y (MD) pre-powerstroke state
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Pylypenko, O, Sweeney, H.L, Houdusse, A.
Deposit date:2012-01-16
Release date:2013-01-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mutations in myosin VI that cause a loss of coordination between heads provide insights into the structural changes underlying force generation and the importance of gating
To be Published
4E0B
DownloadVisualize
BU of 4e0b by Molmil
2.17 Angstrom resolution crystal structure of malate dehydrogenase from Vibrio vulnificus CMCP6
Descriptor: ACETATE ION, Malate dehydrogenase
Authors:Halavaty, A.S, Wawrzak, Z, Onopriyenko, O, Kwon, K, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-03-02
Release date:2012-03-21
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:2.17 Angstrom resolution crystal structure of malate dehydrogenase from Vibrio vulnificus CMCP6
To be Published

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon