5EGE
| Structure of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase | 分子名称: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Morita, J, Kano, K, Kato, K, Takita, H, Ishitani, R, Nishimasu, H, Nureki, O, Aoki, J. | 登録日 | 2015-10-27 | 公開日 | 2016-03-09 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure and biological function of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase Sci Rep, 6, 2016
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5F1C
| Crystal structure of an invertebrate P2X receptor from the Gulf Coast tick in the presence of ATP and Zn2+ ion at 2.9 Angstroms | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, Putative uncharacterized protein, ... | 著者 | Kasuya, G, Hattori, M, Ishitani, R, Nureki, O. | 登録日 | 2015-11-30 | 公開日 | 2016-03-16 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Structural Insights into Divalent Cation Modulations of ATP-Gated P2X Receptor Channels Cell Rep, 14, 2016
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5F7A
| Nitrite complex structure of copper nitrite reductase from Alcaligenes faecalis determined at 293 K | 分子名称: | COPPER (II) ION, Copper-containing nitrite reductase, NITRITE ION | 著者 | Fukuda, Y, Tse, K.M, Nakane, T, Nakatsu, T, Suzuki, M, Sugahara, M, Inoue, S, Masuda, T, Yumoto, F, Matsugaki, N, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Murphy, M.E.P, Inoue, T, Iwata, S, Mizohata, E. | 登録日 | 2015-12-07 | 公開日 | 2016-03-16 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.54 Å) | 主引用文献 | Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography Proc.Natl.Acad.Sci.USA, 113, 2016
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5F7B
| Resting state structure of CuNiR form Alcaligenes faecalis determined at 293 K | 分子名称: | COPPER (II) ION, Copper-containing nitrite reductase | 著者 | Fukuda, Y, Tse, K.M, Nakane, T, Nakatsu, T, Suzuki, M, Sugahara, M, Inoue, S, Masuda, T, Yumoto, F, Matsugaki, N, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Murphy, M.E.P, Inoue, T, Iwata, S, Mizohata, E. | 登録日 | 2015-12-07 | 公開日 | 2016-03-16 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.56 Å) | 主引用文献 | Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography Proc.Natl.Acad.Sci.USA, 113, 2016
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5GUH
| Crystal structure of silkworm PIWI-clade Argonaute Siwi bound to piRNA | 分子名称: | MAGNESIUM ION, PIWI, RNA (28-MER) | 著者 | Matsumoto, N, Nishimasu, H, Ishitani, R, Nureki, O. | 登録日 | 2016-08-29 | 公開日 | 2016-10-19 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal Structure of Silkworm PIWI-Clade Argonaute Siwi Bound to piRNA Cell, 167, 2016
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5GLH
| Human endothelin receptor type-B in complex with ET-1 | 分子名称: | Endothelin Receptor Subtype-B, Peptide from Endothelin-1 | 著者 | Shihoya, W, Nishizawa, T, Okuta, A, Tani, K, Fujiyoshi, Y, Dohmae, N, Nureki, O, Doi, T. | 登録日 | 2016-07-11 | 公開日 | 2016-09-07 | 最終更新日 | 2020-02-26 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Activation mechanism of endothelin ETB receptor by endothelin-1. Nature, 537, 2016
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5H36
| Crystal structures of the TRIC trimeric intracellular cation channel orthologue from Rhodobacter sphaeroides | 分子名称: | 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Uncharacterized protein TRIC | 著者 | Kasuya, G, Hiraizumi, M, Hattori, M, Nureki, O. | 登録日 | 2016-10-20 | 公開日 | 2017-01-11 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (3.409 Å) | 主引用文献 | Crystal structures of the TRIC trimeric intracellular cation channel orthologues Cell Res., 26, 2016
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5GVS
| Crystal structure of the DDX41 DEAD domain in an apo open form | 分子名称: | Probable ATP-dependent RNA helicase DDX41 | 著者 | Omura, H, Oikawa, D, Nakane, T, Kato, M, Ishii, R, Goto, Y, Suga, H, Ishitani, R, Tokunaga, F, Nureki, O. | 登録日 | 2016-09-06 | 公開日 | 2016-10-19 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural and Functional Analysis of DDX41: a bispecific immune receptor for DNA and cyclic dinucleotide Sci Rep, 6, 2016
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5GIJ
| Crystal structure of TDR-TDIF complex | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeat receptor-like protein kinase TDR, ... | 著者 | Morita, J, Kato, K, Ishitani, R, Nishimasu, H, Nureki, O. | 登録日 | 2016-06-23 | 公開日 | 2016-08-24 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Crystal structure of the plant receptor-like kinase TDR in complex with the TDIF peptide Nat Commun, 7, 2016
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5GVR
| Crystal structure of the DDX41 DEAD domain in an apo closed form | 分子名称: | (2S)-2-hydroxybutanedioic acid, Probable ATP-dependent RNA helicase DDX41 | 著者 | Omura, H, Oikawa, D, Nakane, T, Kato, M, Ishii, R, Goto, Y, Suga, H, Ishitani, R, Tokunaga, F, Nureki, O. | 登録日 | 2016-09-06 | 公開日 | 2016-10-19 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Structural and Functional Analysis of DDX41: a bispecific immune receptor for DNA and cyclic dinucleotide Sci Rep, 6, 2016
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5GLI
| Human endothelin receptor type-B in the ligand-free form | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Endothelin Receptor Subtype-B, OLEIC ACID, ... | 著者 | Shihoya, W, Nishizawa, T, Okuta, A, Tani, K, Fujiyoshi, Y, Dohmae, N, Nureki, O, Doi, T. | 登録日 | 2016-07-11 | 公開日 | 2016-09-07 | 最終更新日 | 2020-02-26 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Activation mechanism of endothelin ETB receptor by endothelin-1. Nature, 537, 2016
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5H35
| Crystal structures of the TRIC trimeric intracellular cation channel orthologue from Sulfolobus solfataricus | 分子名称: | 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Fab Heavy Chain, Fab Light Chain, ... | 著者 | Kasuya, G, Hiraizumi, M, Hattori, M, Nureki, O. | 登録日 | 2016-10-20 | 公開日 | 2017-01-11 | 最終更新日 | 2020-02-26 | 実験手法 | X-RAY DIFFRACTION (2.642 Å) | 主引用文献 | Crystal structures of the TRIC trimeric intracellular cation channel orthologues Cell Res., 26, 2016
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5HRT
| Crystal structure of mouse autotaxin in complex with a DNA aptamer | 分子名称: | CALCIUM ION, CHLORIDE ION, Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, ... | 著者 | Kato, K, Nishimasu, H, Morita, J, Ishitani, R, Nureki, O. | 登録日 | 2016-01-24 | 公開日 | 2016-04-06 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (1.997 Å) | 主引用文献 | Structural basis for specific inhibition of Autotaxin by a DNA aptamer Nat.Struct.Mol.Biol., 23, 2016
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5I20
| Crystal structure of protein | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, SULFATE ION, Uncharacterized protein | 著者 | Ishitani, R, Nureki, O. | 登録日 | 2016-02-08 | 公開日 | 2016-06-01 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural basis for amino acid export by DMT superfamily transporter YddG. Nature, 534, 2016
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3UG0
| Crystal structure of a Trp-less green fluorescent protein translated by the simplified genetic code | 分子名称: | Green fluorescent protein | 著者 | Kawahara-Kobayashi, A, Araiso, Y, Matsuda, T, Yokoyama, S, Kigawa, T, Nureki, O, Kiga, D. | 登録日 | 2011-11-02 | 公開日 | 2012-10-17 | 最終更新日 | 2023-12-06 | 実験手法 | X-RAY DIFFRACTION (2.093 Å) | 主引用文献 | Simplification of the genetic code: restricted diversity of genetically encoded amino acids. Nucleic Acids Res., 40, 2012
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3UFZ
| Crystal structure of a Trp-less green fluorescent protein translated by the universal genetic code | 分子名称: | Green fluorescent protein | 著者 | Kawahara-Kobayashi, A, Araiso, Y, Matsuda, T, Yokoyama, S, Kigawa, T, Nureki, O, Kiga, D. | 登録日 | 2011-11-02 | 公開日 | 2012-10-17 | 最終更新日 | 2023-12-06 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Simplification of the genetic code: restricted diversity of genetically encoded amino acids. Nucleic Acids Res., 40, 2012
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3VUY
| Crystal structure of A20 ZF7 in complex with linear tetraubiquitin | 分子名称: | POTASSIUM ION, Polyubiquitin-C, Tumor necrosis factor alpha-induced protein 3, ... | 著者 | Nishimasu, H, Ishitani, R, Nureki, O. | 登録日 | 2012-07-09 | 公開日 | 2013-02-13 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.981 Å) | 主引用文献 | Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation Embo J., 31, 2012
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3VVP
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3VUW
| Crystal structure of A20 ZF7 in complex with linear ubiquitin, form I | 分子名称: | POTASSIUM ION, Polyubiquitin-C, Tumor necrosis factor alpha-induced protein 3, ... | 著者 | Nishimasu, H, Ishitani, R, Nureki, O. | 登録日 | 2012-07-09 | 公開日 | 2013-02-13 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation Embo J., 31, 2012
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3VVR
| Crystal structure of MATE in complex with MaD5 | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein, macrocyclic peptide | 著者 | Tanaka, Y, Ishitani, R, Nureki, O. | 登録日 | 2012-07-27 | 公開日 | 2013-04-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Structural basis for the drug extrusion mechanism by a MATE multidrug transporter. Nature, 496, 2013
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3W1W
| Protein-drug complex | 分子名称: | 1,2-ETHANEDIOL, 2-HYDROXYBENZOIC ACID, CHOLIC ACID, ... | 著者 | Ishii, R, Gupta, V, Yamaguchi, Y, Handa, H, Nureki, O. | 登録日 | 2012-11-21 | 公開日 | 2013-10-09 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.006 Å) | 主引用文献 | Salicylic Acid induces mitochondrial injury by inhibiting ferrochelatase heme biosynthesis activity Mol.Pharmacol., 84, 2013
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3VMF
| Archaeal protein | 分子名称: | Elongation factor 1-alpha, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | 著者 | Kobayashi, K, Saito, K, Ishitani, R, Ito, K, Nureki, O. | 登録日 | 2011-12-12 | 公開日 | 2012-07-25 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural basis for translation termination by archaeal RF1 and GTP-bound EF1alpha complex Nucleic Acids Res., 40, 2012
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3VWA
| Crystal structure of Cex1p | 分子名称: | Cytoplasmic export protein 1 | 著者 | Nozawa, K, Ishitani, R, Nureki, O. | 登録日 | 2012-08-13 | 公開日 | 2013-06-05 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of Cex1p reveals the mechanism of tRNA trafficking between nucleus and cytoplasm Nucleic Acids Res., 41, 2013
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3VVS
| Crystal structure of MATE in complex with MaD3S | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein, macrocyclic peptide | 著者 | Tanaka, Y, Ishitani, R, Nureki, O. | 登録日 | 2012-07-27 | 公開日 | 2013-04-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Structural basis for the drug extrusion mechanism by a MATE multidrug transporter. Nature, 496, 2013
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3VVO
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