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PDB: 150 results

7ZGO
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BU of 7zgo by Molmil
Cryo-EM structure of human NKCC1 (TM domain)
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CHLORIDE ION, CHOLESTEROL HEMISUCCINATE, ...
Authors:Nissen, P, Fenton, R, Neumann, C, Lindtoft Rosenbaek, L, Kock Flygaard, R, Habeck, M, Lykkegaard Karlsen, J, Wang, Y, Lindorff-Larsen, K, Gad, H, Hartmann, R, Lyons, J.
Deposit date:2022-04-04
Release date:2022-10-05
Last modified:2023-04-19
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Cryo-EM structure of the human NKCC1 transporter reveals mechanisms of ion coupling and specificity.
Embo J., 41, 2022
1FG0
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LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND
Descriptor: 23S RIBOSOMAL RNA, 5'-R(CCGGCGGGCUGGUUCAAACCGGCCCGCCGGACC)-3'-5'-R(P-PUROMYCIN)-3'
Authors:Nissen, P, Hansen, J, Ban, N, Moore, P.B, Steitz, T.A.
Deposit date:2000-07-26
Release date:2000-08-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structural basis of ribosome activity in peptide bond synthesis.
Science, 289, 2000
1FFZ
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LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH R(CC)-DA-PUROMYCIN
Descriptor: 23S RIBOSOMAL RNA, R(P*CP*C*)-D(P*A)-R(P*(PU))
Authors:Nissen, P, Hansen, J, Ban, N, Moore, P.B, Steitz, T.A.
Deposit date:2000-07-26
Release date:2000-08-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The structural basis of ribosome activity in peptide bond synthesis.
Science, 289, 2000
1TTT
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BU of 1ttt by Molmil
Phe-tRNA, elongation factoR EF-TU:GDPNP ternary complex
Descriptor: MAGNESIUM ION, OF ELONGATION FACTOR TU (EF-TU), PHENYLALANINE, ...
Authors:Nissen, P, Kjeldgaard, M, Thirup, S, Polekhina, G, Reshetnikova, L, Clark, B.F.C, Nyborg, J.
Deposit date:1995-11-16
Release date:1996-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and a GTP analog.
Science, 270, 1995
1B23
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BU of 1b23 by Molmil
E. coli cysteinyl-tRNA and T. aquaticus elongation factor EF-TU:GTP ternary complex
Descriptor: CYSTEINE, CYSTEINYL TRNA, ELONGATION FACTOR TU, ...
Authors:Nissen, P, Kjeldgaard, M, Thirup, S, Nyborg, J.
Deposit date:1998-12-04
Release date:1998-12-07
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of Cys-tRNACys-EF-Tu-GDPNP reveals general and specific features in the ternary complex and in tRNA.
Structure Fold.Des., 7, 1999
3DWU
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BU of 3dwu by Molmil
Transition-state model conformation of the switch I region fitted into the cryo-EM map of the eEF2.80S.AlF4.GDP complex
Descriptor: Elongation factor Tu-B
Authors:Nissen, P, Nyborg, J, Kjeldgaard, M.
Deposit date:2008-07-23
Release date:2008-08-12
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (12.6 Å)
Cite:Visualization of the eEF2-80S ribosome transition-state complex by cryo-electron microscopy.
J.Mol.Biol., 382, 2008
5I32
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BU of 5i32 by Molmil
Ammonia permeable aquaporin AtTIP2;1
Descriptor: Aquaporin TIP2-1
Authors:Kirscht, A, Nissen, P, Kjellbom, P, Gourdon, P, Johanson, U.
Deposit date:2016-02-09
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Crystal Structure of an Ammonia-Permeable Aquaporin.
Plos Biol., 14, 2016
1N0V
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Crystal structure of elongation factor 2
Descriptor: Elongation factor 2
Authors:Joergensen, R, Ortiz, P.A, Carr-Schmid, A, Nissen, P, Kinzy, T.G, Andersen, G.R.
Deposit date:2002-10-15
Release date:2002-11-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Two crystal structures demonstrate large conformational changes in the eukaryotic ribosomal translocase.
Nat.Struct.Biol., 10, 2003
4H1W
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BU of 4h1w by Molmil
E1 structure of the (SR) Ca2+-ATPase in complex with Sarcolipin
Descriptor: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
Authors:Bublitz, M, Winther, A.-M.L, Karlsen, J, Moller, J.V, Hansen, J.B, Buch-Pedersen, M.J, Nissen, P.
Deposit date:2012-09-11
Release date:2013-03-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The sarcolipin-bound calcium pump stabilizes calcium sites exposed to the cytoplasm.
Nature, 495, 2013
6RB2
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Structure of the (SR)Ca2+-ATPase mutant E340A in the Ca2-E1-CaAMPPCP form
Descriptor: CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
Authors:Clausen, J.D, Montigny, C, Lenoir, G, Arnou, B, Jaxel, C, Moller, J.V, Nissen, P, Andersen, J.P, Le Maire, M, Bublitz, M.
Deposit date:2019-04-09
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.20001125 Å)
Cite:The SERCA residue Glu340 mediates interdomain communication that guides Ca 2+ transport.
Proc.Natl.Acad.Sci.USA, 117, 2020
9ERX
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BU of 9erx by Molmil
Structural basis of D9-THC analog activity at the Cannabinoid 1 receptor
Descriptor: (6aR,10aR)-9-(hydroxymethyl)-6,6-dimethyl-3-(2-methyloctan-2-yl)-6a,7,10,10a-tetrahydrobenzo[c]chromen-1-ol, Antibody ScFv16 Fab fragment, Cannabinoid receptor 1, ...
Authors:Thorsen, T.S, Kulkarni, Y, Boggild, A, Drace, T, Nissen, P, Gajhede, M, Boesen, T, Kastrup, J.S, Gloriam, D.
Deposit date:2024-03-25
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of Delta 9 -THC analog activity at the Cannabinoid 1 receptor.
Res Sq, 2024
7Z04
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BU of 7z04 by Molmil
10 mM Rb+ soak of beryllium fluoride inhibited Na+,K+-ATPase, E2-BeFx (rigid body model)
Descriptor: BERYLLIUM TRIFLUORIDE ION, FXYD domain-containing ion transport regulator, MAGNESIUM ION, ...
Authors:Fruergaard, M.U, Dach, I, Andersen, J.L, Ozol, M, Shasavar, A, Quistgaard, E.M, Poulsen, H, Fedosova, N.U, Nissen, P.
Deposit date:2022-02-22
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (7.5 Å)
Cite:The Na + ,K + -ATPase in complex with beryllium fluoride mimics an ATPase phosphorylated state.
J.Biol.Chem., 298, 2022
7YZR
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50 mM Rb+ soak of beryllium fluoride inhibited Na+,K+-ATPase, E2-BeFx (rigid body model)
Descriptor: BERYLLIUM TRIFLUORIDE ION, FXYD domain-containing ion transport regulator, MAGNESIUM ION, ...
Authors:Fruergaard, M.U, Dach, I, Andersen, J.L, Ozol, M, Shasavar, A, Quistgaard, E.M, Poulsen, H, Fedosova, N.U, Nissen, P.
Deposit date:2022-02-21
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (6.92 Å)
Cite:The Na + ,K + -ATPase in complex with beryllium fluoride mimics an ATPase phosphorylated state.
J.Biol.Chem., 298, 2022
4UU1
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CRYSTAL STRUCTURE OF (SR) CALCIUM-ATPASE E2(TG) IN THE PRESENCE OF DOPC
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, GLYCEROL, MAGNESIUM ION, ...
Authors:Drachmann, N.D, Olesen, C, Moeller, J.V, Guo, Z, Nissen, P, Bublitz, M.
Deposit date:2014-07-24
Release date:2014-10-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Comparing Crystal Structures of Ca(2+) -ATPase in the Presence of Different Lipids.
FEBS J., 281, 2014
4V69
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Ternary complex-bound E.coli 70S ribosome.
Descriptor: 16S rRNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Villa, E, Sengupta, J, Trabuco, L.G, LeBarron, J, Baxter, W.T, Shaikh, T.R, Grassucci, R.A, Nissen, P, Ehrenberg, M, Schulten, K, Frank, J.
Deposit date:2008-12-11
Release date:2014-07-09
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Ribosome-induced changes in elongation factor Tu conformation control GTP hydrolysis
Proc.Natl.Acad.Sci.USA, 106, 2009
5A3Q
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Crystal structure of the (SR) Calcium ATPase E2-vanadate complex bound to thapsigargin and TNP-AMPPCP
Descriptor: CHLORIDE ION, MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
Authors:Clausen, J.D, Bublitz, M, Arnou, B, Olesen, C, Andersen, J.P, Moller, J.V, Nissen, P.
Deposit date:2015-06-02
Release date:2016-04-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Crystal Structure of the Vanadate-Inhibited Ca(2+)-ATPase.
Structure, 24, 2016
5A3R
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BU of 5a3r by Molmil
Crystal structure of the (SR) Calcium ATPase E2.BeF3- complex bound to TNP-AMPPCP
Descriptor: MAGNESIUM ION, POTASSIUM ION, SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 1, ...
Authors:Clausen, J.D, Bublitz, M, Arnou, B, Olesen, C, Andersen, J.P, Moller, J.V, Nissen, P.
Deposit date:2015-06-02
Release date:2016-04-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Crystal Structure of the Vanadate-Inhibited Ca(2+)-ATPase.
Structure, 24, 2016
5A3S
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BU of 5a3s by Molmil
Crystal structure of the (SR) Calcium ATPase E2-vanadate complex bound to thapsigargin and TNP-ATP
Descriptor: CHLORIDE ION, MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
Authors:Clausen, J.D, Bublitz, M, Arnou, B, Olesen, C, Andersen, J.P, Moller, J.V, Nissen, P.
Deposit date:2015-06-03
Release date:2016-04-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structure of the Vanadate-Inhibited Ca(2+)-ATPase.
Structure, 24, 2016
6ZPL
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BU of 6zpl by Molmil
Inward-open structure of human glycine transporter 1 in complex with a benzoylisoindoline inhibitor, sybody Sb_GlyT1#7 and bound Na and Cl ions.
Descriptor: CHLORIDE ION, Endoglucanase H, SODIUM ION, ...
Authors:Shahsavar, A, Stohler, P, Bourenkov, G, Zimmermann, I, Siegrist, M, Guba, W, Pinard, E, Sinning, S, Seeger, M.A, Schneider, T.R, Dawson, R.J.P, Nissen, P.
Deposit date:2020-07-08
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.945 Å)
Cite:Structural insights into the inhibition of glycine reuptake.
Nature, 591, 2021
4UMV
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CRYSTAL STRUCTURE OF A ZINC-TRANSPORTING PIB-TYPE ATPASE IN THE E2P STATE
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ZINC-TRANSPORTING ATPASE
Authors:Wang, K.T, Sitsel, O, Meloni, G, Autzen, H.E, Andersson, M, Klymchuk, T, Nielsen, A.M, Rees, D.C, Nissen, P, Gourdon, P.
Deposit date:2014-05-21
Release date:2014-08-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and Mechanism of Zn(2+)-Transporting P-Type Atpases.
Nature, 514, 2014
4UMW
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CRYSTAL STRUCTURE OF A ZINC-TRANSPORTING PIB-TYPE ATPASE IN E2.PI STATE
Descriptor: MAGNESIUM ION, TETRAFLUOROALUMINATE ION, ZINC-TRANSPORTING ATPASE
Authors:Wang, K.T, Sitsel, O, Meloni, G, Autzen, H.E, Andersson, M, Klymchuk, T, Nielsen, A.M, Rees, D.C, Nissen, P, Gourdon, P.
Deposit date:2014-05-21
Release date:2014-08-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.705 Å)
Cite:Structure and Mechanism of Zn(2+)-Transporting P-Type Atpases.
Nature, 514, 2014
1FFK
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CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION
Descriptor: 23S RRNA, 5S RRNA, CADMIUM ION, ...
Authors:Ban, N, Nissen, P, Hansen, J, Moore, P.B, Steitz, T.A.
Deposit date:2000-07-25
Release date:2000-08-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
Science, 289, 2000
6HXB
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BU of 6hxb by Molmil
SERCA2a from pig heart
Descriptor: CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
Authors:Sitsel, A, Andersen, J.L, Nissen, P, Olesen, C.
Deposit date:2018-10-16
Release date:2019-02-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structures of the heart specific SERCA2a Ca 2+ -ATPase.
Embo J., 38, 2019
5JAE
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BU of 5jae by Molmil
LeuT in the outward-oriented, Na+-free return state, P21 form at pH 6.5
Descriptor: Transporter, octyl beta-D-glucopyranoside
Authors:Malinauskaite, L, Sahin, C, Said, S, Grouleff, J, Shahsavar, A, Bjerregaard, H, Noer, P, Severinsen, K, Boesen, T, Schiott, B, Sinning, S, Nissen, P.
Deposit date:2016-04-12
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A conserved leucine occupies the empty substrate site of LeuT in the Na(+)-free return state.
Nat Commun, 7, 2016
5JAG
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LeuT T354H mutant in the outward-oriented, Na+-free Return State
Descriptor: Transporter, octyl beta-D-glucopyranoside
Authors:Malinauskaite, L, Sahin, C, Said, S, Grouleff, J, Shahsavar, A, Bjerregaard, H, Noer, P, Severinsen, K, Boesen, T, Schiott, B, Sinning, S, Nissen, P.
Deposit date:2016-04-12
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:A conserved leucine occupies the empty substrate site of LeuT in the Na(+)-free return state.
Nat Commun, 7, 2016

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