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PDB: 27 件

7Z2Z
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Structure of yeast RNA Polymerase III-DNA-Ty1 integrase complex (Pol III-DNA-IN1) at 3.1 A
分子名称: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ...
著者Nguyen, P.Q, Fernandez-Tornero, C.
登録日2022-03-01
公開日2023-04-05
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Structural basis of Ty1 integrase tethering to RNA polymerase III for targeted retrotransposon integration.
Nat Commun, 14, 2023
7Z0H
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Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.6 A (focus subunit AC40).
分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
著者Nguyen, P.Q, Huecas, S, Plaza-Pegueroles, A, Fernandez-Tornero, C.
登録日2022-02-22
公開日2023-04-05
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis of Ty1 integrase tethering to RNA polymerase III for targeted retrotransposon integration.
Nat Commun, 14, 2023
7Z31
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Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.7 A (focus subunit C11, no C11 C-terminal Zn-ribbon in the funnel pore).
分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
著者Nguyen, P.Q, Huecas, S, Plaza-Pegueroles, A, Fernandez-Tornero, C.
登録日2022-03-01
公開日2023-04-05
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Structural basis of Ty1 integrase tethering to RNA polymerase III for targeted retrotransposon integration.
Nat Commun, 14, 2023
7Z30
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Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.9 A (focus subunit C11 terminal Zn-ribbon in the funnel pore).
分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
著者Nguyen, P.Q, Fernandez-Tornero, C.
登録日2022-03-01
公開日2023-04-05
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of Ty1 integrase tethering to RNA polymerase III for targeted retrotransposon integration.
Nat Commun, 14, 2023
6DZX
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Crystal structure of the N. meningitides methionine-binding protein in its D-methionine bound conformation.
分子名称: D-METHIONINE, Lipoprotein
著者Nguyen, P.T, Lai, J.Y, Kaiser, J.T, Rees, D.C.
登録日2018-07-05
公開日2019-07-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.678 Å)
主引用文献Structures of the Neisseria meningitides methionine-binding protein MetQ in substrate-free form and bound to l- and d-methionine isomers.
Protein Sci., 28, 2019
8BWS
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BU of 8bws by Molmil
Structure of yeast RNA Polymerase III elongation complex at 3.3 A
分子名称: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ...
著者Nguyen, P.Q, Fernandez-Tornero, C.
登録日2022-12-07
公開日2023-04-05
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis of Ty1 integrase tethering to RNA polymerase III for targeted retrotransposon integration.
Nat Commun, 14, 2023
8D3Y
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Human alpha3 Na+/K+-ATPase in its exoplasmic side-open state
分子名称: FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, Sodium/potassium-transporting ATPase subunit beta-1
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D3X
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Human alpha3 Na+/K+-ATPase in its K+-occluded state
分子名称: FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, Sodium/potassium-transporting ATPase subunit beta-1, ...
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D3U
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Human alpha3 Na+/K+-ATPase in its Na+-occluded state
分子名称: ADENOSINE-5'-DIPHOSPHATE, FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, ...
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D3W
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Human alpha3 Na+/K+-ATPase in its AMPPCP-bound cytoplasmic side-open state
分子名称: FXYD domain-containing ion transport regulator 6, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Sodium/potassium-transporting ATPase subunit alpha-3, ...
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D3V
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BU of 8d3v by Molmil
Human alpha3 Na+/K+-ATPase in its cytoplasmic side-open state
分子名称: FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, Sodium/potassium-transporting ATPase subunit beta-1
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
6OJA
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BU of 6oja by Molmil
Crystal structure of the N. meningitides methionine-binding protein in its L-methionine bound conformation
分子名称: Lipoprotein, METHIONINE
著者Nguyen, P.T, Lai, J.Y, Kaiser, J.T, Rees, D.C.
登録日2019-04-11
公開日2019-08-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structures of the Neisseria meningitides methionine-binding protein MetQ in substrate-free form and bound to l- and d-methionine isomers.
Protein Sci., 28, 2019
6CVA
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BU of 6cva by Molmil
Crystal structure of the N. meningitides methionine-binding protein in its substrate-free conformation
分子名称: Lipoprotein
著者Nguyen, P.T, Lai, J.Y, Kaiser, J.T, Rees, D.C.
登録日2018-03-27
公開日2019-04-03
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (1.559 Å)
主引用文献Structures of the Neisseria meningitides methionine-binding protein MetQ in substrate-free form and bound to l- and d-methionine isomers.
Protein Sci., 28, 2019
6CVL
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BU of 6cvl by Molmil
Crystal structure of the Escherichia coli ATPgS-bound MetNI methionine ABC transporter in complex with its MetQ binding protein
分子名称: IODIDE ION, MERCURY (II) ION, MetI transmembrane subunit, ...
著者Nguyen, P.T, Kaiser, J.T, Rees, D.C.
登録日2018-03-28
公開日2018-11-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.953 Å)
主引用文献Noncanonical role for the binding protein in substrate uptake by the MetNI methionine ATP Binding Cassette (ABC) transporter.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3CML
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BU of 3cml by Molmil
Crystal Structure of the DBL3x domain of the Plasmodium falcipurum VAR2CSA protein
分子名称: Erythrocyte membrane protein 1
著者Singh, K, Gittis, A.G, Nguyen, P, Gowda, D.C, Miller, L.H, Garboczi, D.N.
登録日2008-03-23
公開日2008-09-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the DBL3x domain of pregnancy-associated malaria protein VAR2CSA complexed with chondroitin sulfate A.
Nat.Struct.Mol.Biol., 15, 2008
4BFH
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BU of 4bfh by Molmil
Crystal structure of alpha-amylase inhibitor wrightide R1 (wR1) peptide from Wrightia religiosa
分子名称: WRIGHTIDE R1
著者Yap, L.J, Nguyen, P.Q.T, Tam, J.P, Lescar, J.
登録日2013-03-19
公開日2013-07-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Discovery and Characterization of Pseudocyclic Cystine-Knot Alpha-Amylase Inhibitors with High Resistance to Heat and Proteolytic Degradation.
FEBS J., 281, 2014
5OCJ
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BU of 5ocj by Molmil
Crystal structure of Ag85C bound to cyclophostin 8beta inhibitor
分子名称: DIMETHYL SULFOXIDE, Diacylglycerol acyltransferase/mycolyltransferase Ag85C, methoxy-[(3~{R})-3-[(2~{R})-1-methoxy-1,3-bis(oxidanylidene)butan-2-yl]pentadecyl]phosphinic acid
著者Viljoen, A, Richard, M, Nguyen, P.C, Spilling, C.D, Canaan, S, Cavalier, J.F, Blaise, M, Kremer, L.
登録日2017-07-03
公開日2018-01-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Cyclipostins and cyclophostin analogs inhibit the antigen 85C from
J. Biol. Chem., 293, 2018
2N5Q
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BU of 2n5q by Molmil
Solution structure of cystein-rich peptide jS1 from Jasminum sambac
分子名称: cysteine-rich peptide jS1
著者Shin, J, Kumari, G, Serra, A, Nguyen, P.Q.T, Yoon, H, Tam, J.P.
登録日2015-07-24
公開日2016-07-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Identification of a cysteine-rich peptide family with unusual disulfide connectivity from Jasminum sambac
To be Published
1T5Z
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BU of 1t5z by Molmil
Crystal Structure of the Androgen Receptor Ligand Binding Domain (LBD) with DHT and a peptide derived from its physiological coactivator ARA70
分子名称: 5-ALPHA-DIHYDROTESTOSTERONE, Androgen receptor, Nuclear receptor coactivator 4
著者Estebanez-Perpina, E, Moore, J.M.R, Mar, E, Nguyen, P, Delgado-Rodrigues, E, Baxter, J.D, Webb, P, Fletterick, R.J, Guy, R.K.
登録日2004-05-05
公開日2005-01-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Molecular Mechanisms of Coactivator Utilization in Ligand-dependent Transactivation by the Androgen Receptor.
J.Biol.Chem., 280, 2005
1T63
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Crystal Structure of the Androgen Receptor Ligand Binding Domain with DHT and a peptide derived from its physiological coactivator GRIP1 NR box3
分子名称: 5-ALPHA-DIHYDROTESTOSTERONE, Androgen receptor, Nuclear receptor coactivator 2
著者Estebanez-Perpina, E, Moore, J.M.R, Mar, E, Nguyen, P, Delgado-Rodrigues, E, Baxter, J.D, Webb, P, Fletterick, R.J, Guy, R.K.
登録日2004-05-05
公開日2005-01-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献The Molecular Mechanisms of Coactivator Utilization in Ligand-dependent Transactivation by the Androgen Receptor.
J.Biol.Chem., 280, 2005
1T65
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Crystal structure of the androgen receptor ligand binding domain with DHT and a peptide derived form its physiological coactivator GRIP1 NR box 2 bound in a non-helical conformation
分子名称: 5-ALPHA-DIHYDROTESTOSTERONE, Androgen receptor, Nuclear receptor coactivator 2
著者Estebanez-Perpina, E, Moore, J.M.R, Mar, E, Nguyen, P, Delgado-Rodrigues, E, Baxter, J.D, Webb, P, Fletterick, R.J, Guy, R.K.
登録日2004-05-05
公開日2005-01-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献The Molecular Mechanisms of Coactivator Utilization in Ligand-dependent Transactivation by the Androgen Receptor.
J.Biol.Chem., 280, 2005
3TUZ
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Inward facing conformations of the MetNI methionine ABC transporter: CY5 SeMet soak crystal form
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-methionine transport system permease protein metI, Methionine import ATP-binding protein MetN, ...
著者Johnson, E, Nguyen, P, Rees, D.C.
登録日2011-09-19
公開日2011-11-30
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Inward facing conformations of the MetNI methionine ABC transporter: Implications for the mechanism of transinhibition.
Protein Sci., 21, 2012
1XJ7
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Complex Androgen Receptor LBD and RAC3 peptide
分子名称: 5-ALPHA-DIHYDROTESTOSTERONE, Androgen receptor, RAC3 derived peptide
著者Estebanez-Perpina, E, Moore, J.M.R, Mar, E, Nguyen, P, Delgado-Rodrigues, E, Baxter, J.D, Buehrer, B.M, Webb, P, Fletterick, R.J, Guy, R.K.
登録日2004-09-22
公開日2005-01-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The Molecular Mechanisms of Coactivator Utilization in Ligand-dependent Transactivation by the Androgen Receptor
J.Biol.Chem., 280, 2005
3CPZ
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Crystal structure of VAR2CSA DBL3x domain in the presence of dodecasaccharide of CSA
分子名称: Erythrocyte membrane protein 1, SULFATE ION
著者Singh, K, Gittis, A.G, Nguyen, P, Gowda, D.C, Miller, L.H, Garboczi, D.N.
登録日2008-04-01
公開日2008-09-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the DBL3x domain of pregnancy-associated malaria protein VAR2CSA complexed with chondroitin sulfate A.
Nat.Struct.Mol.Biol., 15, 2008
3TUJ
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Inward facing conformations of the MetNI methionine ABC transporter: DM crystal form
分子名称: D-methionine transport system permease protein metI, Methionine import ATP-binding protein MetN
著者Johnson, E, Nguyen, P, Rees, D.C.
登録日2011-09-16
公開日2011-11-30
最終更新日2011-12-28
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Inward facing conformations of the MetNI methionine ABC transporter: Implications for the mechanism of transinhibition.
Protein Sci., 21, 2012

 

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