Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 491 件

4MTB
DownloadVisualize
BU of 4mtb by Molmil
Bovine trypsin in complex with small molecule inhibitor
分子名称: (2R)-2-amino-N-{(2S)-1-[(4-carbamimidoylbenzyl)amino]-1-oxopropan-2-yl}-4-(4-hydroxyphenyl)butanamide, CALCIUM ION, Cationic trypsin, ...
著者Wagner, S, Heine, A, Steinmetzer, T.
登録日2013-09-19
公開日2014-12-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献X-ray structure of trypsin-inhibitor-complex
To be Published
4B3A
DownloadVisualize
BU of 4b3a by Molmil
Tetracycline repressor class D mutant H100A in complex with tetracycline
分子名称: CHLORIDE ION, MAGNESIUM ION, TETRACYCLINE, ...
著者Eltschkner, S, Schindler, S, Palm, G.J, Schneider, J, Hinrichs, W.
登録日2012-07-23
公開日2013-06-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
4NSL
DownloadVisualize
BU of 4nsl by Molmil
X-ray Crystal structure of Adenylosuccinate Lyase from Salmonella typhimurium
分子名称: Adenylosuccinate lyase, PENTANE-1,5-DIAMINE
著者Banerjee, S, Agrawal, M.J, Murthy, M.R.N.
登録日2013-11-28
公開日2014-12-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystallographic and kinetic studies on Adenylosuccinate Lyase from Salmonella typhimurium
To be Published
1NR7
DownloadVisualize
BU of 1nr7 by Molmil
Crystal structure of apo bovine glutamate dehydrogenase
分子名称: Glutamate dehydrogenase 1
著者Banerjee, S, Schmidt, T, Fang, J, Stanley, C.A, Smith, T.J.
登録日2003-01-23
公開日2003-05-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural studies on ADP activation of mammalian glutamate dehydrogenase and the evolution of regulation
Biochemistry, 42, 2003
3ZOA
DownloadVisualize
BU of 3zoa by Molmil
The structure of Trehalose Synthase (TreS) of Mycobacterium smegmatis in complex with acarbose
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
著者Caner, S, Nguyen, N, Aguda, A, Zhang, R, Pan, Y.T, Withers, S.G, Brayer, G.D.
登録日2013-02-21
公開日2013-07-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The Structure of the Mycobacterium Smegmatis Trehalose Synthase Reveals an Unusual Active Site Configuration and Acarbose-Binding Mode.
Glycobiology, 23, 2013
4AJM
DownloadVisualize
BU of 4ajm by Molmil
Development of a plate-based optical biosensor methodology to identify PDE10 fragment inhibitors
分子名称: 3-AMINO-6-FLUORO-2-[4-(2-METHYLPYRIDIN-4-YL)PHENYL]-N-(METHYLSULFONYL)QUINOLINE-4-CARBOXAMIDE, CAMP AND CAMP-INHIBITED CGMP 3', 5'-CYCLIC PHOSPHODIESTERASE 10A, ...
著者Geschwindner, S, Johansson, P, Spadola, L, Akerud, T, Back, E, Hillertz, P, Horsefeld, R, Scott, C, Spear, N, Tian, G, Tigerstrom, A, Aharony, D, Albert, J.S.
登録日2012-02-16
公開日2013-03-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Development of a Plate-Based Optical Biosensor Methodology to Identify Pde10 Fragment Inhibitors
To be Published
4B1R
DownloadVisualize
BU of 4b1r by Molmil
Tetracycline repressor class D mutant H100A in complex with iso-7- Chlortetracycline
分子名称: CHLORIDE ION, ISO-7-CHLORTETRACYCLINE, TETRACYCLINE REPRESSOR PROTEIN CLASS D
著者Eltschkner, S, Palm, G.J, Schneider, J, Hinrichs, W.
登録日2012-07-12
公開日2013-07-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Tetracycline Repressor Class D Mutant H100A in Complex with Iso-7-Chlortetracycline
To be Published
3ZO9
DownloadVisualize
BU of 3zo9 by Molmil
The structure of Trehalose Synthase (TreS) of Mycobacterium smegmatis
分子名称: CALCIUM ION, CHLORIDE ION, MAGNESIUM ION, ...
著者Caner, S, Nguyen, N, Aguda, A, Zhang, R, Pan, Y.T, Withers, S.G, Brayer, G.D.
登録日2013-02-21
公開日2013-07-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献The Structure of the Mycobacterium Smegmatis Trehalose Synthase Reveals an Unusual Active Site Configuration and Acarbose-Binding Mode.
Glycobiology, 23, 2013
4BMW
DownloadVisualize
BU of 4bmw by Molmil
Crystal structure of the Streptomyces reticuli HbpS E78D, E81D double mutant
分子名称: EXTRACELLULAR HAEM-BINDING PROTEIN
著者Wagener, S, Kursula, I, Wedderhoff, I, Groves, M.R, Ortiz de Orue Lucana, D.
登録日2013-05-11
公開日2013-09-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Iron Binding at Specific Sites within the Octameric Hbps Protects Streptomycetes from Iron-Mediated Oxidative Stress.
Plos One, 8, 2013
5MTQ
DownloadVisualize
BU of 5mtq by Molmil
Crystal structure of M. tuberculosis InhA inhibited by PT511
分子名称: 2-[4-[(4-cyclohexyl-1,2,3-triazol-1-yl)methyl]-2-oxidanyl-phenoxy]benzenecarbonitrile, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Eltschkner, S, Pschibul, A, Spagnuolo, L.A, Yu, W, Tonge, P.J, Kisker, C.
登録日2017-01-10
公開日2017-02-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Evaluating the Contribution of Transition-State Destabilization to Changes in the Residence Time of Triazole-Based InhA Inhibitors.
J. Am. Chem. Soc., 139, 2017
5MTR
DownloadVisualize
BU of 5mtr by Molmil
Crystal structure of M. tuberculosis InhA inhibited by PT512
分子名称: 2-[4-[(4-cyclopentyl-1,2,3-triazol-1-yl)methyl]-2-oxidanyl-phenoxy]benzenecarbonitrile, CHLORIDE ION, Enoyl-[acyl-carrier-protein] reductase [NADH], ...
著者Eltschkner, S, Pschibul, A, Spagnuolo, L.A, Yu, W, Tonge, P.J, Kisker, C.
登録日2017-01-10
公開日2017-02-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Evaluating the Contribution of Transition-State Destabilization to Changes in the Residence Time of Triazole-Based InhA Inhibitors.
J. Am. Chem. Soc., 139, 2017
5MTP
DownloadVisualize
BU of 5mtp by Molmil
Crystal structure of M. tuberculosis InhA inhibited by PT514
分子名称: 2-(2-methylphenoxy)-5-[(4-phenyl-1H-1,2,3-triazol-1-yl)methyl]phenol, CHLORIDE ION, Enoyl-[acyl-carrier-protein] reductase [NADH], ...
著者Eltschkner, S, Pschibul, A, Spagnuolo, L.A, Yu, W, Tonge, P.J, Kisker, C.
登録日2017-01-10
公開日2017-02-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Evaluating the Contribution of Transition-State Destabilization to Changes in the Residence Time of Triazole-Based InhA Inhibitors.
J. Am. Chem. Soc., 139, 2017
5MIH
DownloadVisualize
BU of 5mih by Molmil
Crystal structure of the lectin LecA from Pseudomonas aeruginosa in complex with a phenyl-epoxy-galactopyranoside
分子名称: 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CALCIUM ION, PA-I galactophilic lectin, ...
著者Wagner, S, Hauk, D, Hofmann, M, Joachim, I, Sommer, R, Muller, R, Imberty, A, Varrot, A, Titz, A.
登録日2016-11-28
公開日2017-10-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Covalent Lectin Inhibition and Application in Bacterial Biofilm Imaging.
Angew. Chem. Int. Ed. Engl., 56, 2017
1HMA
DownloadVisualize
BU of 1hma by Molmil
THE SOLUTION STRUCTURE AND DYNAMICS OF THE DNA BINDING DOMAIN OF HMG-D FROM DROSOPHILA MELANOGASTER
分子名称: HMG-D
著者Jones, D.N.M, Searles, M.A, Shaw, G.L, Churchill, M.E.A, Ner, S.S, Keeler, J, Travers, A.A, Neuhaus, D.
登録日1994-05-12
公開日1994-07-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The solution structure and dynamics of the DNA-binding domain of HMG-D from Drosophila melanogaster.
Structure, 2, 1994
7RY6
DownloadVisualize
BU of 7ry6 by Molmil
Solution NMR structural bundle of the first cyclization domain from yersiniabactin synthetase (Cy1) impacted by dynamics
分子名称: HMWP2 nonribosomal peptide synthetase
著者Kancherla, A.K, Mishra, S.H, Marincin, K.A, Nerli, S, Sgourakis, N.G, Dowling, D.P, Bouvignies, G, Frueh, D.P.
登録日2021-08-24
公開日2022-07-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Global protein dynamics as communication sensors in peptide synthetase domains.
Sci Adv, 8, 2022
6O0I
DownloadVisualize
BU of 6o0i by Molmil
NMR ensemble of computationally designed protein XAA
分子名称: Design construct XAA
著者Wei, K.Y, Moschidi, D, Nerli, S, Sgourakis, N, Baker, D.
登録日2019-02-16
公開日2020-04-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Computational design of closely related proteins that adopt two well-defined but structurally divergent folds.
Proc.Natl.Acad.Sci.USA, 117, 2020
6O0C
DownloadVisualize
BU of 6o0c by Molmil
NMR ensemble of computationally designed protein XAA_GVDQ mutant M4L
分子名称: Design construct XAA_GVDQ mutant M4L
著者Wei, K.Y, Moschidi, D, Nerli, S, Sgourakis, N, Baker, D.
登録日2019-02-15
公開日2020-04-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Computational design of closely related proteins that adopt two well-defined but structurally divergent folds.
Proc.Natl.Acad.Sci.USA, 117, 2020
5WOT
DownloadVisualize
BU of 5wot by Molmil
NMR solution structure of a-lytic protease using two 4D-spectra
分子名称: Alpha-lytic protease
著者Evangelidis, T, Nerli, S, Sgourakis, N.G, Tripsianes, K.
登録日2017-08-03
公開日2018-02-07
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Automated NMR resonance assignments and structure determination using a minimal set of 4D spectra.
Nat Commun, 9, 2018
5WOY
DownloadVisualize
BU of 5woy by Molmil
NMR solution structure of Enzyme I (nEIt) protein using two 4D-spectra
分子名称: Phosphoenolpyruvate-protein phosphotransferase
著者Evangelidis, T, Nerli, S, Sgourakis, N.G, Tripsianes, K.
登録日2017-08-03
公開日2018-02-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Automated NMR resonance assignments and structure determination using a minimal set of 4D spectra.
Nat Commun, 9, 2018
5WOX
DownloadVisualize
BU of 5wox by Molmil
NMR solution structure of KanY protein (ms6282) using two 4D-spectra
分子名称: Uncharacterized protein
著者Evangelidis, T, Nerli, S, Sgourakis, N.G, Tripsianes, K.
登録日2017-08-03
公開日2018-02-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Automated NMR resonance assignments and structure determination using a minimal set of 4D spectra.
Nat Commun, 9, 2018
5WOZ
DownloadVisualize
BU of 5woz by Molmil
NMR solution structure of Rtt103 (RTT) protein using two 4D-spectra
分子名称: Regulator of Ty1 transposition protein 103
著者Evangelidis, T, Nerli, S, Sgourakis, N.G, Tripsianes, K.
登録日2017-08-03
公開日2018-02-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Automated NMR resonance assignments and structure determination using a minimal set of 4D spectra.
Nat Commun, 9, 2018
4W93
DownloadVisualize
BU of 4w93 by Molmil
Human pancreatic alpha-amylase in complex with montbretin A
分子名称: CALCIUM ION, CHLORIDE ION, Montbretin A, ...
著者Williams, L.K, Caner, S, Brayer, G.D.
登録日2014-08-27
公開日2015-07-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.352 Å)
主引用文献The amylase inhibitor montbretin A reveals a new glycosidase inhibition motif.
Nat.Chem.Biol., 11, 2015
4PZF
DownloadVisualize
BU of 4pzf by Molmil
Berberine bridge enzyme G164A variant, a reticuline dehydrogenase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DODECAETHYLENE GLYCOL, ...
著者Zafred, D, Wallner, S, Steiner, B, Macheroux, P.
登録日2014-03-30
公開日2014-04-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Rationally engineered flavin-dependent oxidase reveals steric control of dioxygen reduction.
Febs J., 282, 2015
6OSW
DownloadVisualize
BU of 6osw by Molmil
An order-to-disorder structural switch activates the FoxM1 transcription factor
分子名称: Forkhead box M1
著者Marceau, A.H, Rubin, S.M, Nerli, S, McShane, A.C, Sgourakis, N.G.
登録日2019-05-02
公開日2019-05-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献An order-to-disorder structural switch activates the FoxM1 transcription factor.
Elife, 8, 2019
2HZS
DownloadVisualize
BU of 2hzs by Molmil
Structure of the Mediator head submodule Med8C/18/20
分子名称: RNA polymerase II mediator complex subunit 18, RNA polymerase II mediator complex subunit 20, RNA polymerase II mediator complex subunit 8
著者Lariviere, L, Geiger, S, Hoeppner, S, Rother, S, Straesser, K, Cramer, P.
登録日2006-08-09
公開日2006-09-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure and TBP binding of the Mediator head subcomplex Med8-Med18-Med20.
Nat.Struct.Mol.Biol., 13, 2006

221371

件を2024-06-19に公開中

PDB statisticsPDBj update infoContact PDBjnumon