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PDB: 262 results

6KCF
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BU of 6kcf by Molmil
Structure of Inosine 5'-monophosphate Dehydrogenase from Candidatus Liberibacter asiaticus str. psy62
Descriptor: Inosine-5'-monophosphate dehydrogenase
Authors:Nan, J, Zhang, S.R, Jiang, L.
Deposit date:2019-06-28
Release date:2019-08-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Evaluation of Bronopol and Disulfiram as Potential Candidatus Liberibacter asiaticus Inosine 5'-Monophosphate Dehydrogenase Inhibitors by Using Molecular Docking and Enzyme Kinetic.
Molecules, 25, 2020
6LWT
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BU of 6lwt by Molmil
Crystal structure of Staphylococcal Superantigen-Like protein 10
Descriptor: Superantigen-like protein SSL10
Authors:Nan, J, Chengliang, W, Tianrong, H.
Deposit date:2020-02-08
Release date:2021-02-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Staphylococcal Superantigen-Like protein 10
To Be Published
3FYS
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BU of 3fys by Molmil
Crystal Structure of DegV, a fatty acid binding protein from Bacillus subtilis
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, PALMITIC ACID, ...
Authors:Nan, J, Zhou, Y.F, Yang, C.
Deposit date:2009-01-23
Release date:2009-05-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a fatty acid-binding protein from Bacillus subtilis determined by sulfur-SAD phasing using in-house chromium radiation
Acta Crystallogr.,Sect.D, 65, 2009
3IJT
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BU of 3ijt by Molmil
Structural Characterization of SMU.440, a Hypothetical Protein from Streptococcus mutans
Descriptor: Putative uncharacterized protein
Authors:Nan, J, Brostromer, E, Kristensen, O, Su, X.-D.
Deposit date:2009-08-05
Release date:2009-08-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.377 Å)
Cite:Bioinformatics and structural characterization of a hypothetical protein from Streptococcus mutans: implication of antibiotic resistance
Plos One, 4, 2009
8P1B
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BU of 8p1b by Molmil
Lysozyme structure solved from serial crystallography data collected at 2 kHz with JUNGFRAU detector at MAXIV
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C
Authors:Nan, J, Leonarski, F, Furrer, A, Dworkowski, F.
Deposit date:2023-05-11
Release date:2023-10-18
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Kilohertz serial crystallography with the JUNGFRAU detector at a fourth-generation synchrotron source.
Iucrj, 10, 2023
8P1C
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BU of 8p1c by Molmil
Lysozyme structure solved from serial crystallography data collected at 1 kHz with JUNGFRAU detector at MAXIV
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Nan, J, Leonarski, F, Furrer, A, Dworkowski, F.
Deposit date:2023-05-11
Release date:2023-10-18
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Kilohertz serial crystallography with the JUNGFRAU detector at a fourth-generation synchrotron source.
Iucrj, 10, 2023
8P1A
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BU of 8p1a by Molmil
Lysozyme structure solved from serial crystallography data collected at 2 kHz for 5 seconds with JUNGFRAU detector at MAXIV
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C
Authors:Nan, J, Leonarski, F, Furrer, A, Dworkowski, F.
Deposit date:2023-05-11
Release date:2023-10-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Kilohertz serial crystallography with the JUNGFRAU detector at a fourth-generation synchrotron source.
Iucrj, 10, 2023
8P1D
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BU of 8p1d by Molmil
Lysozyme structure solved from serial crystallography data collected at 100 Hz with JUNGFRAU detector at MAXIV
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Nan, J, Leonarski, F, Furrer, A, Dworkowski, F.
Deposit date:2023-05-11
Release date:2023-10-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Kilohertz serial crystallography with the JUNGFRAU detector at a fourth-generation synchrotron source.
Iucrj, 10, 2023
7YG1
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BU of 7yg1 by Molmil
Cryo-EM structure of the C-terminal domain of the human sodium-chloride cotransporter
Descriptor: Solute carrier family 12 member 3
Authors:Nan, J, Yang, X.M, Shan, Z.Y, Yuan, Y.F, Zhang, Y.Q.
Deposit date:2022-07-09
Release date:2022-11-23
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Cryo-EM structure of the human sodium-chloride cotransporter NCC.
Sci Adv, 8, 2022
7Y6I
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BU of 7y6i by Molmil
Cryo-EM structure of human sodium-chloride cotransporter
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Nan, J, Yang, X, Shan, Z, Yuan, Y, Zhang, Y.Q.
Deposit date:2022-06-20
Release date:2022-11-23
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Cryo-EM structure of the human sodium-chloride cotransporter NCC.
Sci Adv, 8, 2022
7YG0
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BU of 7yg0 by Molmil
Cryo-EM structure of human sodium-chloride cotransporter
Descriptor: Solute carrier family 12 member 3
Authors:Nan, J, Yang, X.M, Shan, Z.Y, Yuan, Y.F, Zhang, Y.Q.
Deposit date:2022-07-09
Release date:2022-11-23
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Cryo-EM structure of the human sodium-chloride cotransporter NCC.
Sci Adv, 8, 2022
2B78
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BU of 2b78 by Molmil
A putative sam-dependent methyltransferase from Streptococcus mutans
Descriptor: hypothetical protein SMU.776
Authors:Nan, J, Wang, K.T, Su, X.D.
Deposit date:2005-10-03
Release date:2006-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A putative sam-dependent methyltransferase from Streptococcus mutans
To be Published
8JFC
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BU of 8jfc by Molmil
V1/S quadruple mutant Plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS) complexed with compound 6 (B21591), NADPH and dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 4-[3-[[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]methyl]phenyl]benzoic acid, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
Authors:Vanichtanankul, J, Saeyang, T, Vitsupakorn, D, Saepua, S, Thongpanchang, C, Yuthavong, Y, Kamchonwongpaisan, S, Hoarau, M.
Deposit date:2023-05-17
Release date:2023-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of rigid biphenyl Plasmodium falciparum DHFR inhibitors using a fragment linking strategy.
Rsc Med Chem, 14, 2023
8JFB
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BU of 8jfb by Molmil
V1/S quadruple mutant Plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS) complexed with compound 4 (B21588), NADPH and dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 3-[4-[[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]methyl]phenyl]benzoic acid, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
Authors:Vanichtanankul, J, Saeyang, T, Vitsupakorn, D, Saepua, S, Thongpanchang, C, Yuthavong, Y, Kamchonwongpaisan, S, Hoarau, M.
Deposit date:2023-05-17
Release date:2023-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Discovery of rigid biphenyl Plasmodium falciparum DHFR inhibitors using a fragment linking strategy.
Rsc Med Chem, 14, 2023
8JFD
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BU of 8jfd by Molmil
V1/S quadruple mutant Plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS) complexed with compound 8 (B21594), NADPH and dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 3-[3-[[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]methyl]phenyl]benzoic acid, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
Authors:Vanichtanankul, J, Saeyang, T, Vitsupakorn, D, Saepua, S, Thongpanchang, C, Yuthavong, Y, Kamchonwongpaisan, S, Hoarau, M.
Deposit date:2023-05-17
Release date:2023-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of rigid biphenyl Plasmodium falciparum DHFR inhibitors using a fragment linking strategy.
Rsc Med Chem, 14, 2023
3KJP
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BU of 3kjp by Molmil
Crystal Structure of hPOT1V2-GGTTAGGGTTAG
Descriptor: 5'-D(*G*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*G)-3', Protection of telomeres protein 1
Authors:Nandakumar, J, Cech, T.R, Podell, E.R.
Deposit date:2009-11-03
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:How telomeric protein POT1 avoids RNA to achieve specificity for single-stranded DNA.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KJO
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BU of 3kjo by Molmil
Crystal Structure of hPOT1V2-dTrUd(AGGGTTAG)
Descriptor: DNA/RNA (5'-D(*T)-R(P*U)-D(P*AP*GP*GP*GP*TP*TP*AP*G)-3'), Protection of telomeres protein 1
Authors:Nandakumar, J, Cech, T.R, Podell, E.R.
Deposit date:2009-11-03
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:How telomeric protein POT1 avoids RNA to achieve specificity for single-stranded DNA.
Proc.Natl.Acad.Sci.USA, 107, 2010
5ZMA
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BU of 5zma by Molmil
Structural basis for an allosteric Eya2 phosphatase inhibitor
Descriptor: 3-fluoro-N'-[(E)-{5-[(pyrimidin-2-yl)sulfanyl]furan-2-yl}methylidene]benzohydrazide, Eyes absent homolog 2
Authors:Anantharajan, J, Jansson, A.E, Kang, C.
Deposit date:2018-04-02
Release date:2019-06-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.175 Å)
Cite:Structural and Functional Analyses of an Allosteric EYA2 Phosphatase Inhibitor That Has On-Target Effects in Human Lung Cancer Cells.
Mol.Cancer Ther., 18, 2019
8U8L
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BU of 8u8l by Molmil
X-ray crystal structure of TEBP-2 MCD3 with ds DNA
Descriptor: CESIUM ION, DNA (5'-D(*CP*TP*GP*TP*TP*AP*GP*GP*CP*TP*TP*AP*GP*GP*CP*TP*TP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*GP*CP*CP*TP*AP*AP*GP*CP*CP*TP*AP*AP*CP*A)-3'), ...
Authors:Nandakumar, J, Padmanaban, S.
Deposit date:2023-09-18
Release date:2024-04-03
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Caenorhabditis elegans telomere-binding proteins TEBP-1 and TEBP-2 adapt the Myb module to dimerize and bind telomeric DNA.
Proc.Natl.Acad.Sci.USA, 121, 2024
8U8M
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BU of 8u8m by Molmil
X-ray crystal structure of TEBP-1 MCD2 homodimer
Descriptor: COBALT (II) ION, Double-strand telomeric DNA-binding proteins 1
Authors:Nandakumar, J, Padmanaban, S.
Deposit date:2023-09-18
Release date:2024-04-03
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Caenorhabditis elegans telomere-binding proteins TEBP-1 and TEBP-2 adapt the Myb module to dimerize and bind telomeric DNA.
Proc.Natl.Acad.Sci.USA, 121, 2024
7XI7
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BU of 7xi7 by Molmil
Human dihydrofolate reductase complexed with P39
Descriptor: 6-hexyl-5-phenyl-pyrimidine-2,4-diamine, Dihydrofolate reductase, SULFATE ION
Authors:Vanichtanankul, J, Saeyang, T, Kamchonwongpaisan, S, Yuvaniyama, J, Yuthavong, Y.
Deposit date:2022-04-12
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Insight into Effective Inhibitors' Binding to Toxoplasma gondii Dihydrofolate Reductase Thymidylate Synthase.
Acs Chem.Biol., 17, 2022
7S3L
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BU of 7s3l by Molmil
Structure of Bacillus subtilis CcrZ (previously called YtmP)
Descriptor: Aminoglycoside phosphotransferase family protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Nandakumar, J, Wozniak, K.J.
Deposit date:2021-09-07
Release date:2022-05-11
Last modified:2022-06-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and kinase activity of bacterial cell cycle regulator CcrZ.
Plos Genet., 18, 2022
8WGN
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BU of 8wgn by Molmil
Human dihydrofolate reductase (HsDHFR) complexed with NADPH and LA1
Descriptor: (3~{E})-3-[[2-[3-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]oxypropoxy]phenyl]methylidene]oxolan-2-one, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Vanichtanankul, J, Saeyang, T, Vitsupakorn, D, Decharuangsilp, S, Arwon, U, Yuthavong, Y, Kamchonwongpaisan, S.
Deposit date:2023-09-22
Release date:2024-09-11
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Flexible 2,4-diaminopyrimidine bearing a butyrolactone as Plasmodium falciparum dihydrofolate reductase inhibitors.
Bioorg.Chem., 153, 2024
8WGM
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BU of 8wgm by Molmil
Quadruple mutant Plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS V1/S, N51I+C59R+S108N+I164L) complexed with LA1, NADPH and dUMP
Descriptor: (3~{E})-3-[[2-[3-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]oxypropoxy]phenyl]methylidene]oxolan-2-one, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
Authors:Vanichtanankul, J, Saeyang, T, Vitsupakorn, D, Arwon, U, Decharuangsilp, S, Yuthavong, Y, Kamchonwongpaisan, S.
Deposit date:2023-09-22
Release date:2024-09-11
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Flexible 2,4-diaminopyrimidine bearing a butyrolactone as Plasmodium falciparum dihydrofolate reductase inhibitors.
Bioorg.Chem., 153, 2024
3QFX
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Trypanosoma brucei dihydrofolate reductase pyrimethamine complex
Descriptor: 5-(4-CHLORO-PHENYL)-6-ETHYL-PYRIMIDINE-2,4-DIAMINE, Bifunctional dihydrofolate reductase-thymidylate synthase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Vanichtanankul, J, Yuvaniyama, J, Taweechai, S, Chitnumsub, P, Kamchonwongpaisan, S, Yuthavong, Y.
Deposit date:2011-01-24
Release date:2011-06-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Trypanosomal dihydrofolate reductase reveals natural antifolate resistance
Acs Chem.Biol., 6, 2011

227561

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