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PDB: 17122 results

6MV6
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BU of 6mv6 by Molmil
Crystal structure of RNAse 6
Descriptor: PHOSPHATE ION, Ribonuclease K6
Authors:Couture, J.-F, Doucet, N.
Deposit date:2018-10-24
Release date:2019-11-13
Last modified:2020-05-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Insights into Structural and Dynamical Changes Experienced by Human RNase 6 upon Ligand Binding.
Biochemistry, 59, 2020
1JG4
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BU of 1jg4 by Molmil
Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with S-adenosylmethionine
Descriptor: S-ADENOSYLMETHIONINE, protein-L-isoaspartate O-methyltransferase
Authors:Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O.
Deposit date:2001-06-22
Release date:2001-11-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate.
J.Mol.Biol., 313, 2001
1J9I
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BU of 1j9i by Molmil
STRUCTURE OF THE DNA BINDING DOMAIN OF THE GPNU1 SUBUNIT OF LAMBDA TERMINASE
Descriptor: TERMINASE SMALL SUBUNIT
Authors:De Beer, T, Meyer, J, Ortega, M, Yang, Q, Maes, L, Duffy, C, Berton, N, Sippy, J, Overduin, M, Feiss, M, Catalano, C.
Deposit date:2001-05-25
Release date:2002-08-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Insights into specific DNA recognition during the assembly of a viral genome packaging machine.
Mol.Cell, 9, 2002
1JCH
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BU of 1jch by Molmil
Crystal Structure of Colicin E3 in Complex with its Immunity Protein
Descriptor: CITRIC ACID, COLICIN E3, COLICIN E3 IMMUNITY PROTEIN, ...
Authors:Soelaiman, S, Jakes, K, Wu, N, Li, C, Shoham, M.
Deposit date:2001-06-09
Release date:2001-11-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Crystal structure of colicin E3: implications for cell entry and ribosome inactivation.
Mol.Cell, 8, 2001
1JLT
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BU of 1jlt by Molmil
Vipoxin Complex
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, PHOSPHOLIPASE A2, ...
Authors:Banumathi, S, Rajashankar, K.R, Notzel, C, Aleksiev, B, Singh, T.P, Genov, N, Betzel, C.
Deposit date:2001-07-16
Release date:2001-10-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of the neurotoxic complex vipoxin at 1.4 A resolution.
Acta Crystallogr.,Sect.D, 57, 2001
6QD0
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BU of 6qd0 by Molmil
MloK1 model from single particle analysis of 2D crystals, class 4 (compact/open conformation)
Descriptor: Cyclic nucleotide-gated potassium channel mll3241, POTASSIUM ION
Authors:Righetto, R, Biyani, N, Kowal, J, Chami, M, Stahlberg, H.
Deposit date:2018-12-31
Release date:2019-04-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Retrieving high-resolution information from disordered 2D crystals by single-particle cryo-EM.
Nat Commun, 10, 2019
5IBO
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BU of 5ibo by Molmil
1.95A resolution structure of NanoLuc luciferase
Descriptor: DECANOIC ACID, Oplophorus-luciferin 2-monooxygenase catalytic subunit
Authors:Lovell, S, Mehzabeen, N, Battaile, K.P, Wood, M.G, Encell, L.P, Wood, K.V.
Deposit date:2016-02-22
Release date:2016-04-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:To be determined
To be published
6QEL
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BU of 6qel by Molmil
E. coli DnaBC apo complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA replication protein dnaC, MAGNESIUM ION, ...
Authors:Arias-Palomo, E, Puri, N, O'Shea Murray, V.L, Yan, Q, Berger, J.M.
Deposit date:2019-01-08
Release date:2019-03-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Physical Basis for the Loading of a Bacterial Replicative Helicase onto DNA.
Mol.Cell, 74, 2019
1JA3
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BU of 1ja3 by Molmil
Crystal Structure of the Murine NK Cell Inhibitory Receptor Ly-49I
Descriptor: MHC class I recognition receptor Ly49I
Authors:Dimasi, N, Sawicki, W.M, Reineck, L.A, Li, Y, Natarajan, K, Murgulies, D.H, Mariuzza, A.R.
Deposit date:2001-05-29
Release date:2002-07-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the Ly49I natural killer cell receptor reveals variability in dimerization mode within the Ly49 family.
J.Mol.Biol., 320, 2002
6N4T
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BU of 6n4t by Molmil
Crystal structure of Matriptase1 in complex with a peptidomimetic benzothiazole
Descriptor: ETHANOL, GLUTATHIONE, MAGNESIUM ION, ...
Authors:Campobasso, N.
Deposit date:2018-11-20
Release date:2019-10-02
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.945 Å)
Cite:Discovery and Development of TMPRSS6 Inhibitors Modulating Hepcidin Levels in Human Hepatocytes.
Cell Chem Biol, 26, 2019
6MUS
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BU of 6mus by Molmil
Cryo-EM structure of larger Csm-crRNA-target RNA ternary complex in type III-A CRISPR-Cas system
Descriptor: RNA (25-MER), RNA (33-MER), Uncharacterized protein Csm1, ...
Authors:Jia, N, Wang, C, Eng, E.T.
Deposit date:2018-10-23
Release date:2018-12-12
Last modified:2019-01-30
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity.
Mol. Cell, 73, 2019
6MV7
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BU of 6mv7 by Molmil
Crystal structure of RNAse 6
Descriptor: ADENOSINE MONOPHOSPHATE, Ribonuclease K6
Authors:Couture, J.-F, Doucet, N.
Deposit date:2018-10-24
Release date:2019-11-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Insights into Structural and Dynamical Changes Experienced by Human RNase 6 upon Ligand Binding.
Biochemistry, 59, 2020
1JLJ
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BU of 1jlj by Molmil
1.6 Angstrom crystal structure of the human neuroreceptor anchoring and molybdenum cofactor biosynthesis protein gephyrin
Descriptor: FORMIC ACID, SODIUM ION, gephyrin
Authors:Schwarz, G, Schrader, N, Mendel, R.R, Hecht, H.-J, Schindelin, H.
Deposit date:2001-07-16
Release date:2001-09-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of human gephyrin and plant Cnx1 G domains: comparative analysis and functional implications.
J.Mol.Biol., 312, 2001
6N7K
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BU of 6n7k by Molmil
Cryo-EM structure of tetrameric Ptch1 in complex with ShhNp (form II)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Yan, N, Gong, X, Qian, H.W.
Deposit date:2018-11-27
Release date:2019-05-29
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Inhibition of tetrameric Patched1 by Sonic Hedgehog through an asymmetric paradigm.
Nat Commun, 10, 2019
6N8Z
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BU of 6n8z by Molmil
HSP104DWB extended conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein 104
Authors:Lee, S, Rho, S.H, Lee, J, Sung, N, Liu, J, Tsai, F.T.F.
Deposit date:2018-11-30
Release date:2019-01-02
Last modified:2019-01-16
Method:ELECTRON MICROSCOPY (9.3 Å)
Cite:Cryo-EM Structures of the Hsp104 Protein Disaggregase Captured in the ATP Conformation.
Cell Rep, 26, 2019
6PWA
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BU of 6pwa by Molmil
AAV8 human HEK293-produced, full capsid
Descriptor: Capsid protein
Authors:Paulk, N.K, Poweleit, N.
Deposit date:2019-07-22
Release date:2020-06-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Methods Matter: Standard Production Platforms for Recombinant AAV Produce Chemically and Functionally Distinct Vectors.
Mol Ther Methods Clin Dev, 18, 2020
6N20
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BU of 6n20 by Molmil
Structure of L509V CAO1 - growth condition 2
Descriptor: CHLORIDE ION, Carotenoid oxygenase, FE (II) ION
Authors:Khadka, N, Shi, W, Kiser, P.D.
Deposit date:2018-11-12
Release date:2019-06-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Evidence for distinct rate-limiting steps in the cleavage of alkenes by carotenoid cleavage dioxygenases.
J.Biol.Chem., 294, 2019
7CK5
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BU of 7ck5 by Molmil
Solution structure of 28 amino acid polypeptide (354-381) in Plantago asiatica mosaic virus replicase bound to SDS micelle
Descriptor: PlAMV replicase peptide from RNA-dependent RNA polymerase
Authors:Komatsu, K, Sasaki, N, Yoshida, T, Suzuki, K, Masujima, Y, Hashimoto, M, Watanabe, S, Tochio, N, Kigawa, T, Yamaji, Y, Oshima, K, Namba, S, Nelson, R, Arie, T.
Deposit date:2020-07-15
Release date:2021-07-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Identification of a Proline-Kinked Amphipathic alpha-Helix Downstream from the Methyltransferase Domain of a Potexvirus Replicase and Its Role in Virus Replication and Perinuclear Complex Formation.
J.Virol., 95, 2021
6MON
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BU of 6mon by Molmil
Crystal structure of human SMYD2 in complex with Nle-peptide inhibitor
Descriptor: GLYCEROL, LYS-LEU-NLE-SER-LYS-ARG-GLY, N-lysine methyltransferase SMYD2, ...
Authors:Spellmon, N, Cornett, E, Brunzelle, J, Rothbart, S, Yang, Z.
Deposit date:2018-10-04
Release date:2018-12-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.711 Å)
Cite:A functional proteomics platform to reveal the sequence determinants of lysine methyltransferase substrate selectivity.
Sci Adv, 4, 2018
1GR7
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BU of 1gr7 by Molmil
Crystal structure of the double mutant Cys3Ser/Ser100Pro from Pseudomonas Aeruginosa at 1.8 A resolution
Descriptor: AZURIN, COPPER (II) ION
Authors:Okvist, M, Bonander, N, Sandberg, A, Karlsson, B.G, Krengel, U, Xue, Y, Sjolin, L.
Deposit date:2001-12-14
Release date:2002-05-16
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the double azurin mutant Cys3Ser/Ser100Pro from Pseudomonas aeruginosa at 1.8 A resolution: its folding-unfolding energy and unfolding kinetics.
Biochim.Biophys.Acta, 1596, 2002
6Q72
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BU of 6q72 by Molmil
Crystal structure of the alanine racemase from Bacillus subtilis in the presence of only PEG 4000 and Magnesium chloride in the crystallization condition
Descriptor: Alanine racemase 2, CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Bernardo-Garcia, N, Gago, F, Hermoso, J.A.
Deposit date:2018-12-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Cold-induced aldimine bond cleavage by Tris in Bacillus subtilis alanine racemase.
Org.Biomol.Chem., 17, 2019
5I38
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BU of 5i38 by Molmil
Crystal Structure of tyrosinase from Bacillus megaterium with inhibitor kojic acid in the active site
Descriptor: 5-HYDROXY-2-(HYDROXYMETHYL)-4H-PYRAN-4-ONE, COPPER (II) ION, Tyrosinase
Authors:Kanteev, M, Goldfeder, M, Deri, B, Adir, N, Fishman, A.
Deposit date:2016-02-10
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The unravelling of the complex pattern of tyrosinase inhibition.
Sci Rep, 6, 2016
5ISK
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BU of 5isk by Molmil
Endothiapepsin in complex with fluorinated primary amine fragment
Descriptor: 2-amino-1-(4-fluorophenyl)ethan-1-one, ACETATE ION, DIMETHYL SULFOXIDE, ...
Authors:Radeva, N, Heine, A, Klebe, G.
Deposit date:2016-03-15
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Crystallographic Fragment Screening of an Entire Library
to be published
6Q8T
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Cryo structure of HEWL at 81 kGy
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Lysozyme C
Authors:de la Mora, E, Coquelle, N, Bury, C.S, Rosenthal, M, Garman, E.F, Burghammer, M, Colletier, J.P, Weik, M.
Deposit date:2018-12-16
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.74008667 Å)
Cite:Radiation damage and dose limits in serial synchrotron crystallography at cryo- and room temperatures.
Proc.Natl.Acad.Sci.USA, 117, 2020
6MUA
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BU of 6mua by Molmil
Crystal structure of Csm1-Csm4 subcomplex in the type III-A CRISPR-Csm interference complex
Descriptor: Uncharacterized protein Csm1, Uncharacterized protein Csm4
Authors:Jia, N, Patel, D.J.
Deposit date:2018-10-22
Release date:2019-01-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity.
Mol. Cell, 73, 2019

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