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PDB: 17170 results

7PBQ
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BU of 7pbq by Molmil
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0+A [t2 dataset]
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ...
Authors:Goessweiner-Mohr, N, Fahrenkamp, D, Wald, J, Marlovits, T.C.
Deposit date:2021-08-02
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration.
Nature, 609, 2022
1BGK
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BU of 1bgk by Molmil
SEA ANEMONE TOXIN (BGK) WITH HIGH AFFINITY FOR VOLTAGE DEPENDENT POTASSIUM CHANNEL, NMR, 15 STRUCTURES
Descriptor: BGK
Authors:Dauplais, M, Lecoq, A, Song, J, Cotton, J, Jamin, N, Gilquin, B, Roumestand, C, Vita, C, Harvey, A, Menez, A.
Deposit date:1996-05-08
Release date:1997-01-27
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:On the convergent evolution of animal toxins. Conservation of a diad of functional residues in potassium channel-blocking toxins with unrelated structures.
J.Biol.Chem., 272, 1997
7PBS
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BU of 7pbs by Molmil
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0+A [t1 dataset]
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ...
Authors:Goessweiner-Mohr, N, Fahrenkamp, D, Wald, J, Marlovits, T.C.
Deposit date:2021-08-02
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration.
Nature, 609, 2022
8ERE
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BU of 8ere by Molmil
HTLV-1 capsid protein N-terminal domain triclinic crystal form
Descriptor: capsid protein p24
Authors:Yu, R.J, Li, N, Jacques, D.A.
Deposit date:2022-10-11
Release date:2023-10-18
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:HTLV-1 capsid protein N-terminal domain triclinic crystal form
To Be Published
8ERG
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BU of 8erg by Molmil
HTLV-1 capsid protein N-terminal domain hexagonal crystal form
Descriptor: SULFATE ION, capsid protein p24
Authors:Yu, R.J, Li, N, Jacques, D.A.
Deposit date:2022-10-11
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:HTLV-1 capsid protein N-terminal domain hexagonal crystal form
To Be Published
7PBR
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BU of 7pbr by Molmil
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0-A [t2 dataset]
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvB, MAGNESIUM ION, ...
Authors:Goessweiner-Mohr, N, Fahrenkamp, D, Wald, J, Marlovits, T.C.
Deposit date:2021-08-02
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration.
Nature, 609, 2022
8ERI
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BU of 8eri by Molmil
HTLV-1 capsid protein full-length
Descriptor: capsid protein p24
Authors:Yu, R.J, Li, N, Jacques, D.A.
Deposit date:2022-10-11
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:HTLV-1 capsid protein full-length
To Be Published
8ERF
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BU of 8erf by Molmil
HTLV-1 capsid protein N-terminal domain orthorhombic crystal form
Descriptor: SULFATE ION, capsid protein p24
Authors:Yu, R.J, Li, N, Jacques, D.A.
Deposit date:2022-10-11
Release date:2023-10-18
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:HTLV-1 capsid protein N-terminal domain orthorhombic crystal form
To Be Published
1R4G
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BU of 1r4g by Molmil
Solution structure of the Sendai virus protein X C-subdomain
Descriptor: RNA polymerase alpha subunit
Authors:Blanchard, L, Tarbouriech, N, Blackledge, M, Timmins, P, Burmeister, W.P, Ruigrok, R.W, Marion, D.
Deposit date:2003-10-06
Release date:2004-03-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and dynamics of the nucleocapsid-binding domain of the Sendai virus phosphoprotein in solution
Virology, 319, 2004
7Q10
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BU of 7q10 by Molmil
Acetyltrasferase(3) type IIIa in complex with 3-N-methyl-nemycin B
Descriptor: 3N methyl nemycin B, ACETATE ION, Aminoglycoside N(3)-acetyltransferase III, ...
Authors:Pontillo, N, Guskov, A.
Deposit date:2021-10-17
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:3-N-alkylation in aminoglycoside antibiotic neomycin B overcomes bacterial resistance mediated by acetyltransferase (3) IIIa
To Be Published
7PRL
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BU of 7prl by Molmil
MUC2 D1 with Cu(II)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, GLYCEROL, ...
Authors:Reznik, N, Fass, D.
Deposit date:2021-09-22
Release date:2022-10-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Intestinal mucin is a chaperone of multivalent copper.
Cell, 185, 2022
6W5S
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BU of 6w5s by Molmil
NPC1 structure in GDN micelles at pH 8.0
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, N, Qian, H.W, Wu, X.L.
Deposit date:2020-03-13
Release date:2020-06-17
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural Basis of Low-pH-Dependent Lysosomal Cholesterol Egress by NPC1 and NPC2.
Cell, 182, 2020
6VTU
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BU of 6vtu by Molmil
DH717.1 Fab monomer in complex with man9 glycan
Descriptor: DH717.1 heavy chain, DH717.1 light chain, GLYCEROL, ...
Authors:Fera, D, Bronkema, N.
Deposit date:2020-02-13
Release date:2020-12-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Fab-dimerized glycan-reactive antibodies are a structural category of natural antibodies.
Cell, 184, 2021
6VX7
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BU of 6vx7 by Molmil
bestrophin-2 Ca2+-bound state (5 mM Ca2+)
Descriptor: Bestrophin, CALCIUM ION, CHLORIDE ION
Authors:Owji, A.P, Zhao, Q, Ji, C, Kittredge, A, Hopiavuori, A, Fu, Z, Ward, N, Clarke, O, Shen, Y, Zhang, Y, Hendrickson, W.A, Yang, T.
Deposit date:2020-02-21
Release date:2020-04-08
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.36 Å)
Cite:Structural and functional characterization of the bestrophin-2 anion channel.
Nat.Struct.Mol.Biol., 27, 2020
6VYP
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BU of 6vyp by Molmil
Crystal structure of the LSD1/CoREST histone demethylase bound to its nucleosome substrate
Descriptor: DNA (191-MER), FLAVIN-ADENINE DINUCLEOTIDE, Histone H2A type 1, ...
Authors:Kim, S, Zhu, J, Eek, P, Yennawar, N, Song, T.
Deposit date:2020-02-27
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.99 Å)
Cite:Crystal Structure of the LSD1/CoREST Histone Demethylase Bound to Its Nucleosome Substrate.
Mol.Cell, 78, 2020
7PP1
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BU of 7pp1 by Molmil
Crystal structure of the P2Y12 receptor in complex with the inverse agonist selatogrel.
Descriptor: CHOLESTEROL, P2Y purinoceptor 12,Soluble cytochrome b562,P2Y purinoceptor 12, Selatogrel
Authors:Mac Sweeney, A, Tidten-Luksch, N.
Deposit date:2021-09-13
Release date:2022-11-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Inverse agonist efficacy of selatogrel blunts constitutive P2Y12 receptor signaling by inducing the inactive receptor conformation.
Biochem Pharmacol, 206, 2022
7Q1D
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BU of 7q1d by Molmil
Acetyltrasferase(3) type IIIa in complex with 3-N-methyl-nemycin B
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Aminoglycoside N(3)-acetyltransferase III, CHLORIDE ION, ...
Authors:Pontillo, N, Guskov, A.
Deposit date:2021-10-18
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:3-N-alkylation in aminoglycoside antibiotic neomycin B overcomes bacterial resistance mediated by acetyltransferase (3) IIIa
To Be Published
8ED5
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BU of 8ed5 by Molmil
Crystal structure of loop deletion AioX mutant from Pseudorhizobium sp. str. NT-26
Descriptor: GLYCEROL, Putative periplasmic phosphite-binding-like protein (Pbl) PtxB-like protein designated AioX
Authors:Maher, M.J, Poddar, N.
Deposit date:2022-09-03
Release date:2023-11-08
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Investigating the interaction of the periplasmic arsenite-binding protein, AioX with the sensor histidine kinase, AioS from Pseudorhizobium banfieldii sp. str. NT-26
To Be Published
6VP0
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BU of 6vp0 by Molmil
Human Diacylglycerol Acyltransferase 1 in complex with oleoyl-CoA
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Diacylglycerol O-acyltransferase 1, Lauryl Maltose Neopentyl Glycol, ...
Authors:Wang, L, Qian, H, Han, Y, Nian, Y, Ren, Z, Zhang, H, Hu, L, Prasad, B.V.V, Yan, N, Zhou, M.
Deposit date:2020-02-01
Release date:2020-05-13
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure and mechanism of human diacylglycerol O-acyltransferase 1.
Nature, 581, 2020
7Q0Q
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BU of 7q0q by Molmil
Acetyltrasferase(3) type IIIa in complex with 3-N-methyl-nemycin B
Descriptor: 3N methyl nemycin B, ACETATE ION, Aminoglycoside N(3)-acetyltransferase III, ...
Authors:Pontillo, N, Guskov, A.
Deposit date:2021-10-16
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:The 3-N-alkylation of the neomycin B outmaneuvers the aminoglycoside resistant enzyme acetyltransferase(3)IIIa via an unexpected mechanism
To Be Published
8F5X
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BU of 8f5x by Molmil
Crystal structure of human eosinophil-derived neurotoxin (EDN, ribonuclease 2) in complex with 5'-adenosine monophosphate (AMP)
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, Non-secretory ribonuclease, ...
Authors:Tran, T.T.Q, Pham, N.T.H, Calmettes, C, Doucet, N.
Deposit date:2022-11-15
Release date:2023-11-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Ancestral sequence reconstruction dissects structural and functional differences among eosinophil ribonucleases.
J.Biol.Chem., 300, 2024
6VO3
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BU of 6vo3 by Molmil
AMC009 SOSIP.v4.2 in complex with PGV04 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AMC009 SOSIP.v4.2 envelope glycoprotein gp120, ...
Authors:Cottrell, C.A, de Val, N, Ward, A.B.
Deposit date:2020-01-29
Release date:2020-09-23
Last modified:2020-12-09
Method:ELECTRON MICROSCOPY (4.25 Å)
Cite:Neutralizing Antibody Responses Induced by HIV-1 Envelope Glycoprotein SOSIP Trimers Derived from Elite Neutralizers.
J.Virol., 94, 2020
8ESU
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BU of 8esu by Molmil
Myoglobin variant Mb-imi complex
Descriptor: IMIDAZOLE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Bacik, J.P, Fasan, R, Ando, N.
Deposit date:2022-10-14
Release date:2023-12-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Mechanistic manifold in a hemoprotein-catalyzed cyclopropanation reaction with diazoketone.
Nat Commun, 14, 2023
7Q1X
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BU of 7q1x by Molmil
Acetyltrasferase(3) type IIIa in complex with neomycin B
Descriptor: Aminoglycoside N(3)-acetyltransferase III, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Pontillo, N, Guskov, A.
Deposit date:2021-10-21
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The 3-N-alkylation of the neomycin B outmaneuvers the aminoglycoside resistant enzyme acetyltransferase(3)IIIa via an unexpected mechanism
To Be Published
6VRB
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BU of 6vrb by Molmil
Cryo-EM structure of AcrVIA1-Cas13(crRNA) complex
Descriptor: AcrVIA1, CRISPR-associated endoribonuclease Cas13a, RNA (52-MER)
Authors:Jia, N, Meeske, A.J, Marraffini, L.A, Patel, D.J.
Deposit date:2020-02-07
Release date:2020-06-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A phage-encoded anti-CRISPR enables complete evasion of type VI-A CRISPR-Cas immunity.
Science, 369, 2020

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