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PDB: 17122 results

6ODA
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BU of 6oda by Molmil
Crystal structure of HDAC8 in complex with compound 2
Descriptor: Histone deacetylase 8, N-{2-[3-(hydroxyamino)-3-oxopropyl]phenyl}-3-(trifluoromethyl)benzamide, POTASSIUM ION, ...
Authors:Zheng, X, Conti, C, Caravella, J, Zablocki, M.-M, Bair, K, Barczak, N, Han, B, Lancia Jr, D, Liu, C, Martin, M, Ng, P.Y, Rudnitskaya, A, Thomason, J.J, Garcia-Dancey, R, Hardy, C, Lahdenranta, J, Leng, C, Li, P, Pardo, E, Saldahna, A, Tan, T, Toms, A.V, Yao, L, Zhang, C.
Deposit date:2019-03-26
Release date:2020-04-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Structure-based Discovery of Novel N-(E)-N-Hydroxy-3-(2-(2-oxoimidazolidin-1-yl)phenyl)acrylamides as Potent and Selective HDAC8 inhibitors
To Be Published
1JF4
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BU of 1jf4 by Molmil
Crystal Structure Of Component IV Glycera Dibranchiata Monomeric Hemoglobin
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, monomer hemoglobin component IV
Authors:Park, H.J, Yang, C, Treff, N, Satterlee, J.D, Kang, C.H.
Deposit date:2001-06-20
Release date:2002-06-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structures of Unligated and CN-Ligated Glycera dibranchiata Monomer Ferric Hemoglobin Components III and IV
Proteins, 49, 2002
6NKG
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BU of 6nkg by Molmil
Crystal Structure of the Lipase Lip_vut5 from Goat Rumen metagenome.
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, Lip_vut5, ...
Authors:Kim, Y, Welk, L, Mukendi, G, Nkhi, G, Motloi, T, Jedrzejczak, R, Feto, N, Joachimiak, A.
Deposit date:2019-01-07
Release date:2020-01-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure of the Lipase Lip_vut5 from Goat Rumen metagenome.
To Be Published
1JG3
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BU of 1jg3 by Molmil
Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with adenosine & VYP(ISP)HA substrate
Descriptor: ADENOSINE, CHLORIDE ION, SODIUM ION, ...
Authors:Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O.
Deposit date:2001-06-22
Release date:2001-11-16
Last modified:2011-07-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate.
J.Mol.Biol., 313, 2001
6O7I
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BU of 6o7i by Molmil
Cryo-EM structure of Csm-crRNA-target RNA ternary bigger complex in complex with cA4 in type III-A CRISPR-Cas system
Descriptor: CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), Csm2, Csm3, ...
Authors:Jia, N, Patel, D.J.
Deposit date:2019-03-07
Release date:2019-07-31
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Second Messenger cA4Formation within the Composite Csm1 Palm Pocket of Type III-A CRISPR-Cas Csm Complex and Its Release Path.
Mol.Cell, 75, 2019
1JH5
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BU of 1jh5 by Molmil
Crystal Structure of sTALL-1 of TNF family ligand
Descriptor: TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 13B
Authors:Liu, Y, Xu, L, Opalka, N, Shu, H.-B, Zhang, G.
Deposit date:2001-06-27
Release date:2002-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of sTALL-1 reveals a virus-like assembly of TNF family ligands.
Cell(Cambridge,Mass.), 108, 2002
1K09
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BU of 1k09 by Molmil
Solution structure of BetaCore, A Designed Water Soluble Four-Stranded Antiparallel b-sheet Protein
Descriptor: (7E)-4,9-dioxo-6-oxa-3,7,10-triazadodec-7-ene-1,12-dioic acid, Core Module I, Core Module II
Authors:Carulla, N, Woodward, C, Barany, G.
Deposit date:2001-09-18
Release date:2002-07-10
Last modified:2024-02-21
Method:SOLUTION NMR
Cite:BetaCore, a designed water soluble four-stranded antiparallel beta-sheet protein.
Protein Sci., 11, 2002
5HFN
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BU of 5hfn by Molmil
Crystal structure of a loop truncation variant of Thermotoga maritima Acetyl Esterase TM0077 (apo structure) at 2.75 Angstrom resolution
Descriptor: Cephalosporin-C deacetylase
Authors:Manoj, N, Singh, M.K.
Deposit date:2016-01-07
Release date:2016-05-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:An extended loop in CE7 carbohydrate esterase family is dispensable for oligomerization but required for activity and thermostability
J.Struct.Biol., 194, 2016
6N89
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BU of 6n89 by Molmil
Cryo-EM structure of the Importin beta:Histone H1.0 complex
Descriptor: Histone H1.0, Importin subunit beta-1
Authors:Bilokapic, S, Ivic, N, Halic, M.
Deposit date:2018-11-28
Release date:2019-02-27
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Fuzzy Interactions Form and Shape the Histone Transport Complex.
Mol. Cell, 73, 2019
7D5A
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BU of 7d5a by Molmil
Crystal Structure of BACE1 in complex with N-{3-[(9S)-7-amino-2,2-difluoro-9-(prop-1-yn-1-yl)-6-oxa-8-azaspiro[3.5]non-7-en-9-yl]-4-fluorophenyl}-5-cyanopyridine-2-carboxamide
Descriptor: Beta-secretase 1, GLYCEROL, IODIDE ION, ...
Authors:Fujimoto, K, Yoshida, S, Tadano, G, Asada, N, Fuchino, K, Suzuki, S, Matsuoka, E, Yamamoto, T, Yamamoto, S, Ando, S, Kanegawa, N, Tonomura, Y, Ito, H, Moechars, D, Rombouts, F.J.R, Gijsen, H.J.M, Kusakabe, K.I.
Deposit date:2020-09-25
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-Based Approaches to Improving Selectivity through Utilizing Explicit Water Molecules: Discovery of Selective beta-Secretase (BACE1) Inhibitors over BACE2.
J.Med.Chem., 64, 2021
7D2X
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BU of 7d2x by Molmil
Crystal Structure of BACE1 in complex with N-{3-[(4R)-2-amino-4-(prop-1-yn-1-yl)-5,6-dihydro-4H-1,3-oxazin-4-yl]-4-fluorophenyl}-5-cyanopyridine-2-carboxamide
Descriptor: Beta-secretase 1, GLYCEROL, IODIDE ION, ...
Authors:Fujimoto, K, Yoshida, S, Tadano, G, Asada, N, Fuchino, K, Suzuki, S, Matsuoka, E, Yamamoto, T, Yamamoto, S, Ando, S, Kanegawa, N, Tonomura, Y, Ito, H, Moechars, D, Rombouts, F.J.R, Gijsen, H.J.M, Kusakabe, K.I.
Deposit date:2020-09-17
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure-Based Approaches to Improving Selectivity through Utilizing Explicit Water Molecules: Discovery of Selective beta-Secretase (BACE1) Inhibitors over BACE2.
J.Med.Chem., 64, 2021
1XAB
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BU of 1xab by Molmil
3-ISOPROPYLMALATE DEHYDROGENASE, LOW TEMPERATURE (150K) STRUCTURE
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE
Authors:Nagata, C, Moriyama, H, Tanaka, N.
Deposit date:1995-11-09
Release date:1996-04-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Cryocrystallography of 3-Isopropylmalate dehydrogenase from Thermus thermophilus and its chimeric enzyme.
Acta Crystallogr.,Sect.D, 52, 1996
1XAA
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BU of 1xaa by Molmil
3-ISOPROPYLMALATE DEHYDROGENASE, LOW TEMPERATURE (100K) STRUCTURE
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE
Authors:Nagata, C, Moriyama, H, Tanaka, N.
Deposit date:1995-11-09
Release date:1996-04-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Cryocrystallography of 3-Isopropylmalate dehydrogenase from Thermus thermophilus and its chimeric enzyme.
Acta Crystallogr.,Sect.D, 52, 1996
5HPH
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BU of 5hph by Molmil
Structure of TRAP1 fragment
Descriptor: GLYCEROL, Heat shock protein 75 kDa, mitochondrial, ...
Authors:Sung, N, Chang, C, Lee, S, Tsai, F.T.F.
Deposit date:2016-01-20
Release date:2016-08-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.429 Å)
Cite:2.4 angstrom resolution crystal structure of human TRAP1NM, the Hsp90 paralog in the mitochondrial matrix.
Acta Crystallogr D Struct Biol, 72, 2016
6N5V
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BU of 6n5v by Molmil
Crystal Structure of Strictosidine in complex with 1H-indole-4-ethanamine
Descriptor: 2-(1H-indol-4-yl)ethan-1-amine, Strictosidine synthase
Authors:Cai, Y, Shao, N, Xie, H, Futamura, Y, Panjikar, S, Liu, H, Zhu, H, Osada, H, Zou, H.
Deposit date:2018-11-22
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.549 Å)
Cite:Crystal Structure of Strictosidine in complex with 1H-indole-4-ethanamine
to be published
1GR2
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BU of 1gr2 by Molmil
STRUCTURE OF A GLUTAMATE RECEPTOR LIGAND BINDING CORE (GLUR2) COMPLEXED WITH KAINATE
Descriptor: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, PROTEIN (GLUTAMATE RECEPTOR 2)
Authors:Armstrong, N, Sun, Y, Chen, G.Q, Gouaux, E.
Deposit date:1998-09-17
Release date:1998-12-09
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a glutamate-receptor ligand-binding core in complex with kainate.
Nature, 395, 1998
1GW0
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BU of 1gw0 by Molmil
Crystal Structure of Laccase from Melanocarpus albomyces in Four Copper Form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Hakulinen, N, Kiiskinen, L.-L, Kruus, K, Saloheimo, M, Koivula, A, Rouvinen, J.
Deposit date:2002-03-01
Release date:2002-07-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of a Laccase from Melanocarpus Albomyces with an Intact Trinuclear Copper Site
Nat.Struct.Biol., 9, 2002
5HFU
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BU of 5hfu by Molmil
Crystal Structure of Human Hexokinase 2 with cmpd 27, a 2-amido-6-benzenesulfonamide glucosamine
Descriptor: Hexokinase-2, ~{N}-[(2~{S},3~{R},4~{R},5~{S},6~{R})-6-[[(4-cyanophenyl)sulfonylamino]methyl]-2,4,5-tris(oxidanyl)oxan-3-yl]-3-phenyl-benzamide
Authors:Campobasso, N, Zhao, B, Smallwood, A.
Deposit date:2016-01-07
Release date:2016-03-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.923 Å)
Cite:Discovery of a Novel 2,6-Disubstituted Glucosamine Series of Potent and Selective Hexokinase 2 Inhibitors.
Acs Med.Chem.Lett., 7, 2016
6ODI
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BU of 6odi by Molmil
Structure of CagY from a cryo-EM reconstruction of a T4SS
Descriptor: Type IV secretion system apparatus protein CagY
Authors:Chung, J.M, Sheedlo, M.J, Campbell, A, Sawhney, N, Frick-Cheng, A.E, Lacy, D.B, Cover, T.L, Ohi, M.D.
Deposit date:2019-03-26
Release date:2019-07-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of the Helicobacter pylori Cag type IV secretion system.
Elife, 8, 2019
1H99
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BU of 1h99 by Molmil
PRD of LicT antiterminator from Bacillus subtilis
Descriptor: TRANSCRIPTION ANTITERMINATOR LICT
Authors:Van Tilbeurgh, H, Declerck, N.
Deposit date:2001-03-06
Release date:2001-08-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of an Activated Form of the Pts Regulation Domain from the Lict Transcriptional Antitrminator
Embo J., 20, 2001
6N87
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Plasmodium falciparum FVO apical membrane antigen 1 (AMA1) bound to MTSL spin-labelled cyclised RON2 peptide
Descriptor: Apical membrane antigen-1, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, backbone-cyclised peptide bcRON2hp
Authors:McGowan, S, Drinkwater, N.
Deposit date:2018-11-28
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.588 Å)
Cite:Identification of the Binding Site of Apical Membrane Antigen 1 (AMA1) Inhibitors Using a Paramagnetic Probe.
ChemMedChem, 14, 2019
5HWJ
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Crystal structure of keto-deoxy-D-galactarate dehydratase
Descriptor: FORMIC ACID, GLYCEROL, Probable 5-dehydro-4-deoxyglucarate dehydratase
Authors:Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
Deposit date:2016-01-29
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.648 Å)
Cite:Structure and function of a decarboxylating Agrobacterium tumefaciens keto-deoxy-d-galactarate dehydratase.
Biochemistry, 53, 2014
6N8T
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BU of 6n8t by Molmil
Hsp104DWB closed conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein 104
Authors:Lee, S, Rho, S.H, Lee, J, Sung, N, Liu, J, Tsai, F.T.F.
Deposit date:2018-11-30
Release date:2019-01-02
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Cryo-EM Structures of the Hsp104 Protein Disaggregase Captured in the ATP Conformation.
Cell Rep, 26, 2019
6NE3
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Cryo-EM structure of singly-bound SNF2h-nucleosome complex with SNF2h bound at SHL-2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (156-MER), Histone H2A type 1, ...
Authors:Armache, J.-P, Gamarra, N, Johnson, S.L, Leonard, J.D, Wu, S, Narlikar, G.N, Cheng, Y.
Deposit date:2018-12-16
Release date:2019-07-17
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures of remodeler-nucleosome intermediates suggest allosteric control through the nucleosome.
Elife, 8, 2019
6O9A
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Crystal structure of MqnA complexed with 3-hydroxybenzoic acid
Descriptor: 3-HYDROXYBENZOIC ACID, ACETATE ION, Chorismate dehydratase
Authors:Hicks, K.A, Mahanta, N, Naseem, S, Fedoseyenko, D, Begley, T.P, Ealick, S.E.
Deposit date:2019-03-13
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.326 Å)
Cite:Menaquinone Biosynthesis: Biochemical and Structural Studies of Chorismate Dehydratase.
Biochemistry, 58, 2019

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数据于2024-10-02公开中

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