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PDB: 17048 results

7C75
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BU of 7c75 by Molmil
Crystal structure of yak lactoperoxidase with partially coordinated Na ion in the distal heme cavity
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Lactoperoxidase, ...
Authors:Singh, P.K, Viswanathan, V, Rani, C, Ahmad, N, Sharma, P, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2020-05-22
Release date:2020-06-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Potassium-induced partial inhibition of lactoperoxidase: structure of the complex of lactoperoxidase with potassium ion at 2.20 angstrom resolution.
J.Biol.Inorg.Chem., 26, 2021
7CKR
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BU of 7ckr by Molmil
Cryo-EM structure of the human MCT1/Basigin-2 complex in the presence of anti-cancer drug candidate BAY-8002 in the outward-open conformation.
Descriptor: 2-[[2-chloranyl-5-(phenylsulfonyl)phenyl]carbonylamino]benzoic acid, Basigin, Monocarboxylate transporter 1
Authors:Wang, N, Jiang, X, Zhang, S, Zhu, A, Yuan, Y, Lei, J, Yan, C.
Deposit date:2020-07-18
Release date:2020-12-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of human monocarboxylate transporter 1 inhibition by anti-cancer drug candidates.
Cell, 184, 2021
3L07
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BU of 3l07 by Molmil
Methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase, putative bifunctional protein folD from Francisella tularensis.
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Bifunctional protein folD, ...
Authors:Osipiuk, J, Maltseva, N, Mulligan, R, Hasseman, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-12-09
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:X-ray crystal structure of methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase, putative bifunctional protein folD from Francisella tularensis.
To be Published
7C74
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BU of 7c74 by Molmil
Crystal structure of yak lactoperoxidase using data obtained from crystals soaked in CaCl2 at 2.73 A resolution
Descriptor: CALCIUM ION, CHLORIDE ION, Lactoperoxidase, ...
Authors:Singh, P.K, Viswanathan, V, Pandey, S.N, Ahmad, N, Rani, C, Sharma, P, Sharma, P, Singh, T.P.
Deposit date:2020-05-22
Release date:2020-06-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Potassium-induced partial inhibition of lactoperoxidase: structure of the complex of lactoperoxidase with potassium ion at 2.20 angstrom resolution.
J.Biol.Inorg.Chem., 26, 2021
7CD7
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BU of 7cd7 by Molmil
GFP-40/GFPuv complex, Form I
Descriptor: GFP-40, Green fluorescent protein
Authors:Yasui, N, Yamashita, A.
Deposit date:2020-06-18
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.704 Å)
Cite:A sweet protein monellin as a non-antibody scaffold for synthetic binding proteins.
J.Biochem., 169, 2021
3KQM
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BU of 3kqm by Molmil
Crystal Structure of hPNMT in Complex AdoHcy and 4-Bromo-1H-imidazole
Descriptor: 4-bromo-1H-imidazole, Phenylethanolamine N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Drinkwater, N, Martin, J.L.
Deposit date:2009-11-17
Release date:2010-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Fragment-based screening by X-ray crystallography, MS and isothermal titration calorimetry to identify PNMT (phenylethanolamine N-methyltransferase) inhibitors.
Biochem.J., 431, 2010
7CN0
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BU of 7cn0 by Molmil
Cryo-EM structure of K+-bound hERG channel
Descriptor: POTASSIUM ION, potassium channel 1
Authors:Asai, T, Adachi, N, Moriya, T, Kawasaki, M, Suzuki, K, Senda, T, Murata, T.
Deposit date:2020-07-29
Release date:2021-01-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM Structure of K + -Bound hERG Channel Complexed with the Blocker Astemizole.
Structure, 29, 2021
7CKJ
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BU of 7ckj by Molmil
Crystal structure of CMP kinase in complex with CMP from Thermus thermophilus HB8
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, Cytidylate kinase
Authors:Mega, R, Nakagawa, N, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2020-07-17
Release date:2020-07-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structures of Thermus thermophilus CMP kinase complexed with a phosphoryl group acceptor and donor.
PLoS ONE, 15, 2020
7CP0
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BU of 7cp0 by Molmil
Crystal Structure of double mutant Y115E Y117E human Secretory Glutaminyl Cyclase
Descriptor: 1,2-ETHANEDIOL, Glutaminyl-peptide cyclotransferase, SULFATE ION, ...
Authors:Dileep, K.V, Ihara, K, Sakai, N, Shirozu, M, Zhang, K.Y.J.
Deposit date:2020-08-05
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Piperidine-4-carboxamide as a new scaffold for designing secretory glutaminyl cyclase inhibitors.
Int.J.Biol.Macromol., 170, 2020
7CHK
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BU of 7chk by Molmil
Cryo-EM Structure of Apple Latent Spherical Virus (ALSV)
Descriptor: VP20 protein, VP24 protein, VP25 protein
Authors:Naitow, H, Hamaguchi, T, Maki-Yonekura, S, Isogai, M, Yoshikawa, N, Yonekura, K.
Deposit date:2020-07-06
Release date:2020-11-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Apple latent spherical virus structure with stable capsid frame supports quasi-stable protrusions expediting genome release.
Commun Biol, 3, 2020
3KT8
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BU of 3kt8 by Molmil
Crystal structure of S. cerevisiae tryptophanyl-tRNA synthetase in complex with L-tryptophanamide
Descriptor: L-TRYPTOPHANAMIDE, SULFATE ION, Tryptophanyl-tRNA synthetase, ...
Authors:Zhou, M, Dong, X, Zhong, C, Shen, N, Ding, J.
Deposit date:2009-11-24
Release date:2010-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of Saccharomyces cerevisiae tryptophanyl-tRNA synthetase: new insights into the mechanism of tryptophan activation and implications for anti-fungal drug design
Nucleic Acids Res., 38, 2010
7CKO
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BU of 7cko by Molmil
Cryo-EM structure of the human MCT1/Basigin-2 complex in the presence of anti-cancer drug candidate 7ACC2 in the inward-open conformation
Descriptor: 7-[methyl-(phenylmethyl)amino]-2-oxidanylidene-chromene-3-carboxylic acid, Basigin, Monocarboxylate transporter 1
Authors:Wang, N, Jiang, X, Zhang, S, Zhu, A, Yuan, Y, Lei, J, Yan, C.
Deposit date:2020-07-18
Release date:2020-12-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structural basis of human monocarboxylate transporter 1 inhibition by anti-cancer drug candidates.
Cell, 184, 2021
3L45
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BU of 3l45 by Molmil
A Joint Neutron and X-ray structure of Oxidized Amicyanin
Descriptor: Amicyanin, COPPER (II) ION
Authors:Sukumar, N, Mathews, F.S, Langan, P, Davidson, V.L.
Deposit date:2009-12-18
Release date:2010-04-28
Last modified:2023-09-13
Method:NEUTRON DIFFRACTION (1.8 Å), X-RAY DIFFRACTION
Cite:A joint x-ray and neutron study on amicyanin reveals the role of protein dynamics in electron transfer.
Proc.Natl.Acad.Sci.USA, 107, 2010
7C7D
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BU of 7c7d by Molmil
Crystal structure of the catalytic unit of thermostable GH87 alpha-1,3-glucanase from Streptomyces thermodiastaticus strain HF3-3
Descriptor: CALCIUM ION, PENTAETHYLENE GLYCOL, alpha-1,3-glucanase
Authors:Itoh, T, Panti, N, Toyotake, Y, Hayashi, J, Suyotha, W, Yano, S, Wakayama, M, Hibi, T.
Deposit date:2020-05-25
Release date:2020-11-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Crystal structure of the catalytic unit of thermostable GH87 alpha-1,3-glucanase from Streptomyces thermodiastaticus strain HF3-3.
Biochem.Biophys.Res.Commun., 533, 2020
7CD8
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BU of 7cd8 by Molmil
GFP-40/GFPuv complex, Form II
Descriptor: GFP-40, Green fluorescent protein
Authors:Yasui, N, Yamashita, A.
Deposit date:2020-06-18
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:A sweet protein monellin as a non-antibody scaffold for synthetic binding proteins.
J.Biochem., 169, 2021
7CJU
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BU of 7cju by Molmil
Crystal structure of inactive form of chitosanase crystallized by ammonium sulfate
Descriptor: Glucanase
Authors:Guo, Y, Qu, L, Nishida, N, Hoshino, T.
Deposit date:2020-07-14
Release date:2020-07-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Electrostatic Potentials around the Proteins Preferably Crystallized by Ammonium Sulfate
Cryst.Growth Des., 21, 2021
7CPO
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BU of 7cpo by Molmil
Crystal Structure of Anolis carolinensis MHC I complex
Descriptor: HIS-VAL-TYR-GLY-PRO-LEU-LYS-PRO-ILE, MHC CLASS I ANTIGEN, beta2-microglobulin
Authors:Wang, Y, Qu, Z, Ma, L, Wei, X, Zhang, N, Xia, C.
Deposit date:2020-08-07
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Crystal Structure of the MHC Class I (MHC-I) Molecule in the Green Anole Lizard Demonstrates the Unique MHC-I System in Reptiles.
J Immunol., 206, 2021
7CGV
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BU of 7cgv by Molmil
Full consensus L-threonine 3-dehydrogenase, FcTDH-IIYM (NAD+ bound form)
Descriptor: Artificial L-threonine 3-dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Motoyama, T, Hiramatsu, N, Asano, Y, Nakano, S, Ito, S.
Deposit date:2020-07-02
Release date:2020-10-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Protein Sequence Selection Method That Enables Full Consensus Design of Artificial l-Threonine 3-Dehydrogenases with Unique Enzymatic Properties.
Biochemistry, 59, 2020
7CN1
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BU of 7cn1 by Molmil
Cryo-EM structure of K+-bound hERG channel in the presence of astemizole
Descriptor: POTASSIUM ION, potassium channel
Authors:Asai, T, Adachi, N, Moriya, T, Kawasaki, M, Suzuki, K, Senda, T, Murata, T.
Deposit date:2020-07-29
Release date:2021-01-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM Structure of K + -Bound hERG Channel Complexed with the Blocker Astemizole.
Structure, 29, 2021
7CWU
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BU of 7cwu by Molmil
SARS-CoV-2 spike proteins trimer in complex with P17 and FC05 Fabs cocktail
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Wang, X, Wang, N.
Deposit date:2020-08-31
Release date:2020-12-16
Last modified:2021-01-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure-based development of human antibody cocktails against SARS-CoV-2.
Cell Res., 31, 2021
3L93
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BU of 3l93 by Molmil
Phosphopantetheine adenylyltransferase from Yersinia pestis.
Descriptor: FORMIC ACID, Phosphopantetheine adenylyltransferase
Authors:Osipiuk, J, Maltseva, N, Makowska-grzyska, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-01-04
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:X-ray crystal structure of phosphopantetheine adenylyltransferase from Yersinia pestis.
To be Published
5HO5
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BU of 5ho5 by Molmil
MamB
Descriptor: MAGNESIUM ION, Magnetosome protein MamB
Authors:Zeytuni, N, Keren, N, Davidov, G, Zarivach, R.
Deposit date:2016-01-19
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The dual role of MamB in magnetosome membrane assembly and magnetite biomineralization.
Mol. Microbiol., 107, 2018
7C3G
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BU of 7c3g by Molmil
Crystal structure of human ALK2 kinase domain with R206H mutation in complex with a bicyclic pyrazole inhibitor RK-73134
Descriptor: 1,2-ETHANEDIOL, Activin receptor type-1, SULFATE ION, ...
Authors:Sakai, N, Mishima-Tsumagari, C, Matsumoto, T, Shirouzu, M.
Deposit date:2020-05-12
Release date:2021-03-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Novel bicyclic pyrazoles as potent ALK2 (R206H) inhibitors for the treatment of fibrodysplasia ossificans progressiva.
Bioorg.Med.Chem.Lett., 38, 2021
3L6Y
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BU of 3l6y by Molmil
Crystal structure of p120 catenin in complex with E-cadherin
Descriptor: Catenin delta-1, E-cadherin
Authors:Ishiyama, N, Lee, S.-H, Liu, S, Li, G.-Y, Smith, M.J, Reichardt, L.F, Ikura, M.
Deposit date:2009-12-27
Release date:2010-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Dynamic and static interactions between p120 catenin and E-cadherin regulate the stability of cell-cell adhesion.
Cell(Cambridge,Mass.), 141, 2010
7COY
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BU of 7coy by Molmil
Structure of the far-red light utilizing photosystem I of Acaryochloris marina
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, CHLOROPHYLL D, ...
Authors:Kawakami, K, Yonekura, K, Hamaguchi, T, Kashino, Y, Shinzawa-Itoh, K, Inoue-Kashino, N, Itoh, S, Ifuku, K, Yamashita, E.
Deposit date:2020-08-05
Release date:2021-03-31
Last modified:2021-05-05
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structure of the far-red light utilizing photosystem I of Acaryochloris marina.
Nat Commun, 12, 2021

224004

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