Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17204 results

1OXX
DownloadVisualize
BU of 1oxx by Molmil
Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
Descriptor: ABC transporter, ATP binding protein, IODIDE ION
Authors:Verdon, G, Albers, S.-V, van Oosterwijk, N, Dijkstra, B.W, Driessen, A.J.M, Thunnissen, A.M.W.H.
Deposit date:2003-04-03
Release date:2003-09-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Formation of the productive ATP-Mg2+-bound dimer of GlcV, an ABC-ATPase from Sulfolobus solfataricus
J.Mol.Biol., 334, 2003
6P6W
DownloadVisualize
BU of 6p6w by Molmil
Cryo-EM structure of voltage-gated sodium channel NavAb N49K/L109A/M116V/G94C/Q150C disulfide crosslinked mutant in the resting state
Descriptor: Fusion of Maltose-binding protein and voltage-gated sodium channel NavAb
Authors:Wisedchaisri, G, Tonggu, L, McCord, E, Gamal El-Din, T.M, Wang, L, Zheng, N, Catterall, W.A.
Deposit date:2019-06-04
Release date:2019-08-14
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Resting-State Structure and Gating Mechanism of a Voltage-Gated Sodium Channel.
Cell, 178, 2019
5CBM
DownloadVisualize
BU of 5cbm by Molmil
Crystal structure of PfA-M17 with virtual ligand inhibitor
Descriptor: (2S)-2-{[(R)-[(R)-amino(phenyl)methyl](hydroxy)phosphoryl]methyl}-4-methylpentanoic acid, CARBONATE ION, GLYCEROL, ...
Authors:Ruggeri, C, Drinkwater, N, McGowan, S.
Deposit date:2015-07-01
Release date:2015-10-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification and Validation of a Potent Dual Inhibitor of the P. falciparum M1 and M17 Aminopeptidases Using Virtual Screening.
Plos One, 10, 2015
6UE7
DownloadVisualize
BU of 6ue7 by Molmil
Structure of dimeric sIgA complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin J chain, ...
Authors:Kumar, N, Arthur, C.P, Ciferri, C, Matsumoto, M.L.
Deposit date:2019-09-20
Release date:2020-02-19
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure of the secretory immunoglobulin A core.
Science, 367, 2020
6U0Y
DownloadVisualize
BU of 6u0y by Molmil
Crystal Structure of the metallo-beta-lactamase L1 from Stenotrophomonas maltophilia
Descriptor: 1,2-ETHANEDIOL, Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase), ZINC ION
Authors:Kim, Y, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-08-15
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the metallo-beta-lactamase L1 from Stenotrophomonas maltophilia
To Be Published
1OIB
DownloadVisualize
BU of 1oib by Molmil
PHOSPHATE-BINDING PROTEIN MUTANT T141D
Descriptor: PHOSPHATE-BINDING PROTEIN
Authors:Yao, N, Choudhary, A, Ledvina, P.S, Quiocho, F.A.
Deposit date:1995-11-25
Release date:1997-04-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Modulation of a salt link does not affect binding of phosphate to its specific active transport receptor.
Biochemistry, 35, 1996
6U2D
DownloadVisualize
BU of 6u2d by Molmil
PmtCD peptide exporter basket domain
Descriptor: ABC transporter ATP-binding protein, IODIDE ION, SULFATE ION
Authors:Zeytuni, N, Strynadka, N.C.J.
Deposit date:2019-08-19
Release date:2020-10-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural insight into the Staphylococcus aureus ATP-driven exporter of virulent peptide toxins
Sci Adv, 6, 2020
6P2J
DownloadVisualize
BU of 6p2j by Molmil
Dimeric structure of ACAT1
Descriptor: S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (9Z)-octadec-9-enethioate (non-preferred name), Sterol O-acyltransferase 1
Authors:Yan, N, Qian, H.W.
Deposit date:2019-05-21
Release date:2020-05-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for catalysis and substrate specificity of human ACAT1.
Nature, 581, 2020
6UEA
DownloadVisualize
BU of 6uea by Molmil
Structure of pentameric sIgA complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin J chain, ...
Authors:Kumar, N, Arthur, C.P, Ciferri, C, Matsumoto, M.L.
Deposit date:2019-09-20
Release date:2020-02-19
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of the secretory immunoglobulin A core.
Science, 367, 2020
1OGP
DownloadVisualize
BU of 1ogp by Molmil
The crystal structure of plant sulfite oxidase provides insight into sulfite oxidation in plants and animals
Descriptor: (MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI), CESIUM ION, GLYCEROL, ...
Authors:Schrader, N, Fischer, K, Theis, K, Mendel, R.R, Schwarz, G, Kisker, C.
Deposit date:2003-05-08
Release date:2003-10-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Crystal Structure of Plant Sulfite Oxidase Provides Insights Into Sulfite Oxidation in Plants and Animals
Structure, 11, 2003
5CNN
DownloadVisualize
BU of 5cnn by Molmil
Crystal structure of the EGFR kinase domain mutant I682Q
Descriptor: Epidermal growth factor receptor, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Kovacs, E, Das, R, Mirza, A, Jura, N, Barros, T, Kuriyan, J.
Deposit date:2015-07-17
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Analysis of the Role of the C-Terminal Tail in the Regulation of the Epidermal Growth Factor Receptor.
Mol.Cell.Biol., 35, 2015
6FBR
DownloadVisualize
BU of 6fbr by Molmil
Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to the Human MEp DR1 Response Element, pH 4.2
Descriptor: DI(HYDROXYETHYL)ETHER, DNA (5'-D(*CP*TP*GP*GP*GP*TP*CP*AP*AP*AP*GP*TP*TP*CP*AP*TP*C)-3'), DNA (5'-D(*GP*AP*TP*GP*AP*AP*CP*TP*TP*TP*GP*AP*CP*CP*CP*AP*G)-3'), ...
Authors:McEwen, A.G, Poussin-Courmontagne, P, Osz, J, Rochel, N.
Deposit date:2017-12-19
Release date:2018-12-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Modulation of RXR-DNA complex assembly by DNA context.
Mol. Cell. Endocrinol., 481, 2019
6TVE
DownloadVisualize
BU of 6tve by Molmil
Unliganded human CD73 (5'-nucleotidase) in the open state
Descriptor: 5'-nucleotidase, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Scaletti, E, Strater, N.
Deposit date:2020-01-09
Release date:2020-02-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:2-Substituted alpha , beta-Methylene-ADP Derivatives: Potent Competitive Ecto-5'-nucleotidase (CD73) Inhibitors with Variable Binding Modes.
J.Med.Chem., 63, 2020
5CD9
DownloadVisualize
BU of 5cd9 by Molmil
Crystal structure of the CTD of Drosophila Oskar protein
Descriptor: Maternal effect protein oskar, SULFATE ION
Authors:Yang, N, Hu, M, Yu, Z, Wang, M, Lehmann, R, Xu, R.M.
Deposit date:2015-07-03
Release date:2015-09-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Structure of Drosophila Oskar reveals a novel RNA binding protein
Proc.Natl.Acad.Sci.USA, 112, 2015
6CMO
DownloadVisualize
BU of 6cmo by Molmil
Rhodopsin-Gi complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab light chain, ...
Authors:Kang, Y, Kuybeda, O, de Waal, P.W, Mukherjee, S, Van Eps, N, Dutka, P, Zhou, X.E, Bartesaghi, A, Erramilli, S, Morizumi, T, Gu, X, Yin, Y, Liu, P, Jiang, Y, Meng, X, Zhao, G, Melcher, K, Earnst, O.P, Kossiakoff, A.A, Subramaniam, S, Xu, H.E.
Deposit date:2018-03-05
Release date:2018-06-20
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-EM structure of human rhodopsin bound to an inhibitory G protein.
Nature, 558, 2018
6TZL
DownloadVisualize
BU of 6tzl by Molmil
The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
Descriptor: SULFATE ION, Surface protein adhesin
Authors:Schormann, N, Deivanayagam, C.
Deposit date:2019-08-12
Release date:2020-08-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
To Be Published
6CO9
DownloadVisualize
BU of 6co9 by Molmil
Crystal structure of Rhodococcus jostii RHA1 IpdAB COCHEA-COA complex
Descriptor: Probable CoA-transferase alpha subunit, Probable CoA-transferase beta subunit, S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (5R,10R)-7-hydroxy-10-methyl-2-oxo-1-oxaspiro[4.5]dec-6-ene-6-carbothioate (non-preferred name), ...
Authors:Crowe, A.M, Workman, S.D, Watanabe, N, Worrall, L.J, Strynadka, N.C.J, Eltis, L.D.
Deposit date:2018-03-12
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:IpdAB, a virulence factor inMycobacterium tuberculosis, is a cholesterol ring-cleaving hydrolase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5CEE
DownloadVisualize
BU of 5cee by Molmil
Malic enzyme from Candidatus Phytoplasma AYWB in complex with NAD and Mg2+
Descriptor: MAGNESIUM ION, NAD-dependent malic enzyme, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Alvarez, C.E, Trajtenberg, F, Larrieux, N, Saigo, M, Mussi, M.A, Andreo, C.S, Drincovich, M.F, Buschiazzo, A.
Deposit date:2015-07-06
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:The crystal structure of the malic enzyme from Candidatus Phytoplasma reveals the minimal structural determinants for a malic enzyme.
Acta Crystallogr D Struct Biol, 74, 2018
1QG0
DownloadVisualize
BU of 1qg0 by Molmil
WILD-TYPE PEA FNR
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PROTEIN (FERREDOXIN:NADP+ REDUCTASE)
Authors:Deng, Z, Aliverti, A, Zanetti, G, Arakaki, A.K, Ottado, J, Orellano, E.G, Calcaterra, N.B, Ceccarelli, E.A, Carrillo, N, Karplus, P.A.
Deposit date:1999-04-18
Release date:1999-04-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A productive NADP+ binding mode of ferredoxin-NADP+ reductase revealed by protein engineering and crystallographic studies.
Nat.Struct.Biol., 6, 1999
1QGA
DownloadVisualize
BU of 1qga by Molmil
PEA FNR Y308W MUTANT IN COMPLEX WITH NADP+
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTEIN (FERREDOXIN:NADP+ REDUCTASE), ...
Authors:Deng, Z, Aliverti, A, Zanetti, G, Arakaki, A.K, Ottado, J, Orellano, E.G, Calcaterra, N.B, Ceccarelli, E.A, Carrillo, N, Karplus, P.A.
Deposit date:1999-04-18
Release date:1999-04-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:A productive NADP+ binding mode of ferredoxin-NADP+ reductase revealed by protein engineering and crystallographic studies.
Nat.Struct.Biol., 6, 1999
6FIR
DownloadVisualize
BU of 6fir by Molmil
Human cytosolic 5'-nucleotidase II soaked with 5mM3-Phenyl-N-(9H-purin-6-yl)benzamide
Descriptor: Cytosolic purine 5'-nucleotidase, GLYCEROL, MAGNESIUM ION, ...
Authors:Aghajari, N, Preeti, P.
Deposit date:2018-01-19
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Lead optimization and biological evaluation of fragment-based cN-II inhibitors.
Eur J Med Chem, 168, 2019
6P1I
DownloadVisualize
BU of 6p1i by Molmil
Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and dCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA Primer 20-mer, DNA template 27-mer, ...
Authors:Bertoletti, N, Anderson, K.S.
Deposit date:2019-05-19
Release date:2019-07-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Structural insights into the recognition of nucleoside reverse transcriptase inhibitors by HIV-1 reverse transcriptase: First crystal structures with reverse transcriptase and the active triphosphate forms of lamivudine and emtricitabine.
Protein Sci., 28, 2019
7ZEM
DownloadVisualize
BU of 7zem by Molmil
Structure of a parallel G-quadruplex with a snapback loop
Descriptor: DNA (5'-D(*(DT5)P*GP*GP*CP*TP*AP*GP*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3')
Authors:Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K.
Deposit date:2022-03-31
Release date:2022-06-15
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Guiding the folding of G-quadruplexes through loop residue interactions.
Nucleic Acids Res., 50, 2022
7ZEO
DownloadVisualize
BU of 7zeo by Molmil
Structure of a hybrid-type G-quadruplex with a snapback loop and an all-syn G-column (hybrid-1R)
Descriptor: DNA (5'-D(*(DG5)P*(BGM)P*CP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3')
Authors:Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K.
Deposit date:2022-03-31
Release date:2022-06-15
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Guiding the folding of G-quadruplexes through loop residue interactions.
Nucleic Acids Res., 50, 2022
7C94
DownloadVisualize
BU of 7c94 by Molmil
Crystal structure of the anti-human podoplanin antibody Fab fragment complex with glycopeptide
Descriptor: GLYCEROL, Heavy chain of Fab fragment, Light chain of Fab fragment, ...
Authors:Suzuki, K, Nakamura, S, Ogasawara, S, Naruchi, K, Shimabukuro, J, Tukahara, N, Kaneko, M.K, Kato, Y, Murata, T.
Deposit date:2020-06-04
Release date:2020-09-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Crystal structure of an anti-podoplanin antibody bound to a disialylated O-linked glycopeptide.
Biochem.Biophys.Res.Commun., 533, 2020

227111

건을2024-11-06부터공개중

PDB statisticsPDBj update infoContact PDBjnumon