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PDB: 17048 件
1II1
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Structural Basis for Poor Uracil Excision from Hairpin DNA: NMR Study
分子名称: 5'-D(*AP*GP*GP*AP*TP*CP*CP*UP*TP*TP*TP*GP*GP*AP*TP*CP*CP*T)-3'
著者Ghosh, M, Rumpal, N, Varshney, U, Chary, K.V.
登録日2001-04-20
公開日2002-05-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural basis for poor uracil excision from hairpin DNA. An NMR study.
Eur.J.Biochem., 269, 2002
1WK1
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Solution structure of Lectin C-type domain derived from a hypothetical protein from C. elegans
分子名称: Hypothetical protein yk1067a12
著者Kobayashi, N, Koshiba, S, Inoue, M, Tochio, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-29
公開日2004-11-29
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of Lectin C-type domain derived from a hypothetical protein from C. elegans
To be Published
1IK8
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BU of 1ik8 by Molmil
NMR structure of Alpha-Bungarotoxin
分子名称: LONG NEUROTOXIN 1
著者Niccolai, N, Ciutti, A, Spiga, O.
登録日2001-05-03
公開日2001-05-16
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献NMR structure of alpha-bungarotoxin free and bound to a mimotope of the nicotinic acetylcholine receptor.
Biochemistry, 41, 2002
7PH1
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Trypsin in complex with BPTI mutant (2S)-2-amino-4-monofluorobutanoic acid
分子名称: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
著者Dimos, N, Leppkes, J, Koksch, B, Loll, B.
登録日2021-08-16
公開日2022-03-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Water Network in the Binding Pocket of Fluorinated BPTI-Trypsin Complexes─Insights from Simulation and Experiment.
J.Phys.Chem.B, 126, 2022
6OPU
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HIV-1 Protease NL4-3 K45I, M46I, V82F, I84V Mutant in complex with darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease NL4-3
著者Lockbaum, G.J, Henes, M, Kosovrasti, K, Leidner, F, Nachum, G.S, Nalivaika, E.A, Bolon, D.N.A, KurtYilmaz, N, Schiffer, C.A.
登録日2019-04-25
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Picomolar to Micromolar: Elucidating the Role of Distal Mutations in HIV-1 Protease in Conferring Drug Resistance.
Acs Chem.Biol., 14, 2019
1WJZ
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BU of 1wjz by Molmil
Soluiotn structure of J-domain of mouse DnaJ like protein
分子名称: 1700030A21Rik protein
著者Kobayashi, N, Koshiba, S, Inoue, M, Tochio, N, Tomizawa, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-29
公開日2004-11-29
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Soluiotn structure of J-domain of mouse DnaJ like protein
To be Published
6OPY
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BU of 6opy by Molmil
HIV-1 Protease NL4-3 I13V, G16E, V32I, L33F, K45I, M46I, A71V, L76V, V82F, I84V Mutant in complex with darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease NL4-3
著者Lockbaum, G.J, Henes, M, Kosovrasti, K, Leidner, F, Nachum, G.S, Nalivaika, E.A, Bolon, D.N.A, KurtYilmaz, N, Schiffer, C.A.
登録日2019-04-25
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Picomolar to Micromolar: Elucidating the Role of Distal Mutations in HIV-1 Protease in Conferring Drug Resistance.
Acs Chem.Biol., 14, 2019
1WYB
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BU of 1wyb by Molmil
Structure of 6-aminohexanoate-dimer hydrolase
分子名称: 6-aminohexanoate-dimer hydrolase
著者Negoro, S, Ohki, T, Shibata, N, Mizuno, N, Wakitani, Y, Tsurukame, J, Matsumoto, K, Kawamoto, I, Takeo, M, Higuchi, Y.
登録日2005-02-09
公開日2005-09-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of 6-aminohexanoate-dimer hydrolase
To be Published
1IF0
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BU of 1if0 by Molmil
PSEUDO-ATOMIC MODEL OF BACTERIOPHAGE HK97 PROCAPSID (PROHEAD II)
分子名称: PROTEIN (MAJOR CAPSID PROTEIN GP5)
著者Conway, J.F, Wikoff, W.R, Cheng, N, Duda, R.L, Hendrix, R.W, Johnson, J.E, Steven, A.C.
登録日2001-04-11
公開日2001-05-02
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Virus maturation involving large subunit rotations and local refolding.
Science, 292, 2001
5HX0
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Crystal structure of unknown function protein Dfer_1899 fromDyadobacter fermentans DSM 18053
分子名称: ACETATE ION, GLYCEROL, TETRAETHYLENE GLYCOL, ...
著者Chang, C, Duke, N, Clancy, S, Chhor, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2016-01-29
公開日2016-02-17
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.851 Å)
主引用文献Crystal structure of unknown function protein Dfer_1899 fromDyadobacter fermentans DSM 18053
To Be Published
1WFR
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Solution structure of the conserved hypothetical protein TT1886, possibly sterol carrier protein, from Thermus Thermophilus HB8
分子名称: Hypothetical Protein TT1886
著者Goroncy, A, Kigawa, T, Koshiba, S, Tomizawa, T, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-26
公開日2004-11-26
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution structure of the conserved hypothetical protein TT1886, possibly sterol carrier protein, from Thermus Thermophilus HB8
To be Published
5I2H
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BU of 5i2h by Molmil
Crystal structure of O-methyltransferase family 2 protein Plim_1147 from Planctomyces limnophilus DSM 3776 complex with Apigenin
分子名称: 1,2-ETHANEDIOL, 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one, FORMIC ACID, ...
著者Chang, C, Duke, N, Bigelow, L, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2016-02-08
公開日2016-03-02
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.551 Å)
主引用文献Crystal structure of O-methyltransferase family 2 protein Plim_1147 from Planctomyces limnophilus DSM 3776 complex with Apigenin.
To Be Published
1ITW
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Crystal structure of the monomeric isocitrate dehydrogenase in complex with isocitrate and Mn
分子名称: ISOCITRIC ACID, Isocitrate dehydrogenase, MANGANESE (II) ION
著者Yasutake, Y, Watanabe, S, Yao, M, Takada, Y, Fukunaga, N, Tanaka, I.
登録日2002-02-12
公開日2002-12-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of the Monomeric Isocitrate Dehydrogenase: Evidence of a Protein Monomerization by a Domain Duplication
Structure, 10, 2002
5I08
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Prefusion structure of a human coronavirus spike protein
分子名称: Spike glycoprotein,Foldon chimera
著者Kirchdoerfer, R.N, Cottrell, C.A, Wang, N, Pallesen, J, Yassine, H.M, Turner, H.L, Corbett, K.S, Graham, B.S, McLellan, J.S, Ward, A.B.
登録日2016-02-03
公開日2016-03-02
最終更新日2020-04-22
実験手法ELECTRON MICROSCOPY (4.04 Å)
主引用文献Pre-fusion structure of a human coronavirus spike protein.
Nature, 531, 2016
1WQZ
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Complicated water orientations in the minor groove of B-DNA decamer D(CCATTAATGG)2 observed by neutron diffraction measurements
分子名称: 5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3'
著者Arai, S, Chatake, T, Ohhara, T, Kurihara, K, Tanaka, I, Suzuki, N, Fujimoto, Z, Mizuno, H, Niimura, N.
登録日2004-10-07
公開日2005-06-21
最終更新日2023-10-25
実験手法NEUTRON DIFFRACTION (3 Å)
主引用文献Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)2 observed by neutron diffraction measurements
Nucleic Acids Res., 33, 2005
1WR6
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Crystal structure of GGA3 GAT domain in complex with ubiquitin
分子名称: ADP-ribosylation factor binding protein GGA3, ubiquitin
著者Kawasaki, M, Shiba, T, Shiba, Y, Yamaguchi, Y, Matsugaki, N, Igarashi, N, Suzuki, M, Kato, R, Kato, K, Nakayama, K, Wakatsuki, S.
登録日2004-10-12
公開日2005-06-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Molecular mechanism of ubiquitin recognition by GGA3 GAT domain.
Genes Cells, 10, 2005
5I3A
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Crystal Structure of tyrosinase from Bacillus megaterium with configuration A of hydroquinone inhibitor in the active site
分子名称: Tyrosinase, ZINC ION, benzene-1,4-diol
著者Kanteev, M, Deri, B, Adir, N, Fishman, A.
登録日2016-02-10
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The unravelling of the complex pattern of tyrosinase inhibition.
Sci Rep, 6, 2016
5I47
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Crystal structure of RimK domain protein ATP-grasp from Sphaerobacter thermophilus DSM 20745
分子名称: GLYCEROL, RimK domain protein ATP-grasp
著者Chang, C, Duke, N, Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2016-02-11
公開日2016-03-16
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of RimK domain protein ATP-grasp from Sphaerobacter thermophilus DSM 20745
To Be Published
5ICS
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BU of 5ics by Molmil
Crystal structure of 17beta-hydroxysteroid dehydrogenase type 14 apoenzyme.
分子名称: 17-beta-hydroxysteroid dehydrogenase 14
著者Bertoletti, N, Marchais-Oberwinkler, S, Heine, A, Klebe, G.
登録日2016-02-23
公開日2016-07-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献New Insights into Human 17 beta-Hydroxysteroid Dehydrogenase Type 14: First Crystal Structures in Complex with a Steroidal Ligand and with a Potent Nonsteroidal Inhibitor.
J.Med.Chem., 59, 2016
6OPT
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HIV-1 Protease NL4-3 V82F, I84V Mutant in complex with darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease NL4-3, SULFATE ION
著者Lockbaum, G.J, Henes, M, Kosovrasti, K, Leidner, F, Nachum, G.S, Nalivaika, E.A, Bolon, D.N.A, KurtYilmaz, N, Schiffer, C.A.
登録日2019-04-25
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Picomolar to Micromolar: Elucidating the Role of Distal Mutations in HIV-1 Protease in Conferring Drug Resistance.
Acs Chem.Biol., 14, 2019
6OPX
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HIV-1 Protease NL4-3 I13V, G16E, V32I, L33F, K45I, M46I, L76V, V82F, I84V Mutant in complex with darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease NL4-3
著者Lockbaum, G.J, Henes, M, Kosovrasti, K, Leidner, F, Nachum, G.S, Nalivaika, E.A, Bolon, D.N.A, KurtYilmaz, N, Schiffer, C.A.
登録日2019-04-25
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Picomolar to Micromolar: Elucidating the Role of Distal Mutations in HIV-1 Protease in Conferring Drug Resistance.
Acs Chem.Biol., 14, 2019
1WWX
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BU of 1wwx by Molmil
Solution structure of the ETS-domain of the Ets domain transcription factor
分子名称: E74-like factor 5 ESE-2b
著者Goroncy, A, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-01-18
公開日2005-07-18
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the ETS-domain of the Ets domain transcription factor
To be Published
7PKW
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BU of 7pkw by Molmil
Crystal structure of VIRB8-like OrfG central and C-terminal domains of Streptococcus thermophilus ICESt3 (Gram positive conjugative type IV secretion system).
分子名称: GLYCEROL, Putative transfer protein, SULFATE ION
著者Favier, F, Didierjean, C, Cappele, J, Douzi, B, Leblond-Bourget, N.
登録日2021-08-27
公開日2022-09-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.835 Å)
主引用文献Crystal structure of VIRB8-like OrfG central and C-terminal domains of Streptococcus thermophilus ICESt3 (Gram positive conjugative type IV secretion system).
To Be Published
5ISK
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Endothiapepsin in complex with fluorinated primary amine fragment
分子名称: 2-amino-1-(4-fluorophenyl)ethan-1-one, ACETATE ION, DIMETHYL SULFOXIDE, ...
著者Radeva, N, Heine, A, Klebe, G.
登録日2016-03-15
公開日2017-03-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Crystallographic Fragment Screening of an Entire Library
to be published
5I38
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Crystal Structure of tyrosinase from Bacillus megaterium with inhibitor kojic acid in the active site
分子名称: 5-HYDROXY-2-(HYDROXYMETHYL)-4H-PYRAN-4-ONE, COPPER (II) ION, Tyrosinase
著者Kanteev, M, Goldfeder, M, Deri, B, Adir, N, Fishman, A.
登録日2016-02-10
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The unravelling of the complex pattern of tyrosinase inhibition.
Sci Rep, 6, 2016

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件を2024-08-21に公開中

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