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PDB: 17170 results

8VCZ
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Crystal Structure of KAI2 from Oryza sativa
Descriptor: Probable esterase D14L
Authors:Gilio, A.K, Shabek, N, Guercio, A.M, Pawlak, J.
Deposit date:2023-12-14
Release date:2024-07-31
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural insights into rice KAI2 receptor provide functional implications for perception and signal transduction.
J.Biol.Chem., 300, 2024
4PIS
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BU of 4pis by Molmil
Crystal structure of human adenovirus 8 protease in complex with a nitrile inhibitor
Descriptor: N~2~-[(2R)-2-(3,5-dichlorophenyl)-2-(dimethylamino)acetyl]-N-({2-[(Z)-iminomethyl]pyrimidin-4-yl}methyl)-L-isoleucinamide, PVI, Protease
Authors:Mac Sweeney, A, Grosche, P, Ellis, D, Combrink, K, Erbel, P, Hughes, N, Sirockin, F, Melkko, S, Bernardi, A, Ramage, P, Jarousse, N, Altmann, E.
Deposit date:2014-05-09
Release date:2014-09-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery and structure-based optimization of adenain inhibitors.
Acs Med.Chem.Lett., 5, 2014
8VD3
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BU of 8vd3 by Molmil
Crystal Structure of D14 from Arabidopsis thaliana
Descriptor: Strigolactone esterase D14
Authors:Gilio, A.K, Shabek, N, Guercio, A.M, Pawlak, J.
Deposit date:2023-12-14
Release date:2024-07-31
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into rice KAI2 receptor provide functional implications for perception and signal transduction.
J.Biol.Chem., 300, 2024
8VMG
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BU of 8vmg by Molmil
Crystal structure of GSK-3 26-383 bound to Axin 383-435
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Enos, M.D, Gavagan, M, Jameson, N, Zalatan, J.G, Weis, W.I.
Deposit date:2024-01-13
Release date:2024-08-28
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural and functional effects of phosphopriming and scaffolding in the kinase GSK-3 beta.
Sci.Signal., 17, 2024
8VCD
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BU of 8vcd by Molmil
Crystal Structure of plant Carboxylesterase 15 bound to SL intermediate
Descriptor: (5S)-5-hydroxy-3-methylfuran-2(5H)-one, Carboxylesterase 15, GLYCEROL
Authors:Palayam, M, Shabek, N.
Deposit date:2023-12-14
Release date:2024-08-07
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural insights into strigolactone catabolism by carboxylesterases reveal a conserved conformational regulation.
Nat Commun, 15, 2024
6BKD
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BU of 6bkd by Molmil
Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody AR3D
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab AR3D heavy chain, Fab AR3D light chain, ...
Authors:Tzarum, N, Wilson, I.A, Law, M.
Deposit date:2017-11-08
Release date:2018-12-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Genetic and structural insights into broad neutralization of hepatitis C virus by human VH1-69 antibodies.
Sci Adv, 5, 2019
8VME
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BU of 8vme by Molmil
Crystal structure of the GSK-3/Axin complex bound to a phosphorylated beta-catenin T41A peptide
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Axin-1, Catenin beta-1, ...
Authors:Enos, M.D, Gavagan, M, Jameson, N, Zalatan, J.G, Weis, W.I.
Deposit date:2024-01-13
Release date:2024-08-28
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional effects of phosphopriming and scaffolding in the kinase GSK-3 beta.
Sci.Signal., 17, 2024
8VMF
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BU of 8vmf by Molmil
Crystal structure of a transition-state mimic of the GSK-3/Axin complex bound to a beta-catenin S45D peptide
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Axin-1, ...
Authors:Enos, M.D, Gavagan, M, Jameson, N, Zalatan, J.G, Weis, W.I.
Deposit date:2024-01-13
Release date:2024-08-28
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional effects of phosphopriming and scaffolding in the kinase GSK-3 beta.
Sci.Signal., 17, 2024
6CHR
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BU of 6chr by Molmil
Crystal structure of a group II intron lariat with an intact 3' splice site (pre-2s state)
Descriptor: MAGNESIUM ION, RNA (5'-R(P*UP*GP*UP*UP*UP*AP*UP*UP*AP*AP*AP*AP*A)-3'), RNA (621-MER), ...
Authors:Chan, R.T, Peters, J.K, Robart, A.R, Wiryaman, T, Rajashankar, K.R, Toor, N.
Deposit date:2018-02-22
Release date:2018-11-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural basis for the second step of group II intron splicing.
Nat Commun, 9, 2018
8VTU
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BU of 8vtu by Molmil
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution
Descriptor: 1-cyclopropyl-7-[(4-{[3-({(3aR,4R,7R,8S,9S,10R,11R,13R,14E,15S,15aR)-10-{[(2S,3R,4S,6R)-4-(dimethylamino)-3-hydroxy-6-methyloxan-2-yl]oxy}-4-ethyl-11-methoxy-3a,7,9,11,13,15-hexamethyl-14-[({3-[5-(methylcarbamoyl)pyridin-3-yl]prop-2-yn-1-yl}oxy)imino]-2,6-dioxododecahydro-2H,4H-[1,3]dioxolo[4,5-c]oxacyclotetradecin-8-yl}oxy)-3-oxopropyl]amino}butyl)amino]-6-fluoro-4-oxo-1,4-dihydroquinoline-3-carboxylic acid (non-preferred name), 16S Ribosomal RNA, 23S Ribosomal RNA, ...
Authors:Aleksandrova, E.V, Ma, C.-X, Klepacki, D, Alizadeh, F, Vazquez-Laslop, N, Liang, J.-H, Polikanov, Y.S, Mankin, A.S.
Deposit date:2024-01-27
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Macrolones target bacterial ribosomes and DNA gyrase and can evade resistance mechanisms.
Nat.Chem.Biol., 2024
1VIE
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BU of 1vie by Molmil
STRUCTURE OF DIHYDROFOLATE REDUCTASE
Descriptor: DIHYDROFOLATE REDUCTASE
Authors:Narayana, N, Matthews, D.A, Howell, E.E, Xuong, N.-H.
Deposit date:1996-10-03
Release date:1997-10-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A plasmid-encoded dihydrofolate reductase from trimethoprim-resistant bacteria has a novel D2-symmetric active site.
Nat.Struct.Biol., 2, 1995
4PIE
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BU of 4pie by Molmil
Crystal structure of human adenovirus 2 protease a substrate based nitrile inhibitor
Descriptor: ACETATE ION, N-{(2S)-2-(3-chlorophenyl)-2-[(methylsulfonyl)amino]acetyl}-L-phenylalanyl-N-[(2Z)-2-iminoethyl]glycinamide, Pre-protein VI, ...
Authors:Mac Sweeney, A, Grosche, P, Ellis, D, Combrink, C, Erbel, C, Hughes, N, Sirockin, F, Melkko, S, Bernardi, A, Ramage, P, Jarousse, N, Altmann, E.
Deposit date:2014-05-08
Release date:2014-09-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Discovery and structure-based optimization of adenain inhibitors.
Acs Med.Chem.Lett., 5, 2014
6DFP
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BU of 6dfp by Molmil
Crystal Structure of a Tripartite Toxin Component VCA0883 from Vibrio cholerae
Descriptor: VCA0883
Authors:Kim, Y, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-05-15
Release date:2018-05-23
Last modified:2022-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Genomic Island of Vibrio cholerae Encodes a Three-Component Cytotoxin with Monomer and Protomer Forms Structurally Similar to Alpha-Pore-Forming Toxins.
J.Bacteriol., 204, 2022
8WFM
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BU of 8wfm by Molmil
Crystal structure of Omicron BA.1 in complex with a neutralizing antibody scFv T11
Descriptor: Spike protein S1, T11 scFv
Authors:Zhang, M, Zhang, N, Gabibov, A, Guo, Y.
Deposit date:2023-09-19
Release date:2024-09-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Crystal structure of Omicron BA.1 in complex with a neutralizing antibody scFv T11
To Be Published
8WG4
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BU of 8wg4 by Molmil
mouse TMEM63b in DDM-CHS micelle with YN9303-24 Fab
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, CHOLESTEROL HEMISUCCINATE, CSC1-like protein 2,Green fluorescent protein
Authors:Miyata, Y, Takahashi, K, Lee, Y, Sultan, C.S, Kuribayashi, R, Takahashi, M, Hata, K, Bamba, T, Izumi, Y, Liu, K, Uemura, T, Nomura, N, Iwata, S, Nagata, S, Nishizawa, T, Segawa, K.
Deposit date:2023-09-20
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mechanosensitive channel TMEM63B functions as a plasma membrane lipid scramblase
To Be Published
6DBY
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BU of 6dby by Molmil
Crystal structure of Nudix 1 from Arabidopsis thaliana
Descriptor: MAGNESIUM ION, Nudix hydrolase 1
Authors:Noel, J.P, Thomas, S.T, Dudareva, N, Henry, L.K.
Deposit date:2018-05-03
Release date:2018-09-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Contribution of isopentenyl phosphate to plant terpenoid metabolism.
Nat Plants, 4, 2018
1VIF
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BU of 1vif by Molmil
STRUCTURE OF DIHYDROFOLATE REDUCTASE
Descriptor: DIHYDROFOLATE REDUCTASE, FOLIC ACID
Authors:Narayana, N, Matthews, D.A, Howell, E.E, Xuong, N.-H.
Deposit date:1996-10-03
Release date:1997-10-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A plasmid-encoded dihydrofolate reductase from trimethoprim-resistant bacteria has a novel D2-symmetric active site.
Nat.Struct.Biol., 2, 1995
8WFH
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BU of 8wfh by Molmil
Crystal structure of Omicron BA.4/5 in complex with a neutralizing antibody scFv D1
Descriptor: D1 scFv, Spike protein S1
Authors:Zhang, M, Zhang, N, Gabibov, A, Guo, Y.
Deposit date:2023-09-19
Release date:2024-09-25
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Crystal structure of Omicron BA.4/5 in complex with a neutralizing antibody scFv D1
To Be Published
6DCS
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BU of 6dcs by Molmil
Stage III sporulation protein AF (SpoIIIAF)
Descriptor: SULFATE ION, Stage III sporulation protein AF
Authors:Strynadka, N.C.J, Zeytuni, N, Camp, A.H, Flanagan, K.A.
Deposit date:2018-05-08
Release date:2018-07-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and biochemical characterization of SpoIIIAF, a component of a sporulation-essential channel in Bacillus subtilis.
J. Struct. Biol., 204, 2018
6DRA
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BU of 6dra by Molmil
Low IP3 Ca2+ human type 3 1,4,5-inositol trisphosphate receptor
Descriptor: CALCIUM ION, Inositol 1,4,5-trisphosphate receptor type 3, ZINC ION
Authors:Hite, R.K, Paknejad, N.
Deposit date:2018-06-11
Release date:2018-08-01
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Structural basis for the regulation of inositol trisphosphate receptors by Ca2+and IP3.
Nat. Struct. Mol. Biol., 25, 2018
8WG3
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BU of 8wg3 by Molmil
mouse TMEM63b in LMNG-CHS micelle
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, CHOLESTEROL HEMISUCCINATE, CSC1-like protein 2,Green fluorescent protein
Authors:Miyata, Y, Takahashi, K, Lee, Y, Sultan, C.S, Kuribayashi, R, Takahashi, M, Hata, K, Bamba, T, Izumi, Y, Liu, K, Uemura, T, Nomura, N, Iwata, S, Nagata, S, Nishizawa, T, Segawa, K.
Deposit date:2023-09-20
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Mechanosensitive channel TMEM63B functions as a plasma membrane lipid scramblase
To Be Published
6D58
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BU of 6d58 by Molmil
Crystal structure of a Fc fragment of Human IgG3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin heavy constant gamma 3
Authors:Gohain, N, Tolbert, W.D, Pazgier, M.
Deposit date:2018-04-19
Release date:2019-05-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal structure of a Fc fragment of Human IgG3.
To Be Published
6DMQ
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BU of 6dmq by Molmil
Crystal structure of the T27A mutant of human alpha defensin HNP4.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Neutrophil defensin 4
Authors:Gohain, N, Tolbert, W.D, Pazgier, M.
Deposit date:2018-06-05
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Systematic mutational analysis of human neutrophil alpha-defensin HNP4.
Biochim Biophys Acta Biomembr, 1861, 2019
6DO4
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BU of 6do4 by Molmil
KLHDC2 ubiquitin ligase in complex with SelS C-end degron
Descriptor: Kelch domain-containing protein 2, SELS C-END DEGRON
Authors:Rusnac, D.V, Lin, H.C, Yen, H.C.S, Zheng, N.
Deposit date:2018-06-08
Release date:2018-12-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Recognition of the Diglycine C-End Degron by CRL2KLHDC2Ubiquitin Ligase.
Mol. Cell, 72, 2018
6BV9
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BU of 6bv9 by Molmil
Structure of proteinaceous RNase P 1 (PRORP1) from A. thaliana after overnight soak with juglone
Descriptor: 5-hydroxynaphthalene-1,4-dione, CHLORIDE ION, Proteinaceous RNase P 1, ...
Authors:Karasik, A, Wu, N, Fierke, C.A, Koutmos, M.
Deposit date:2017-12-12
Release date:2019-06-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inhibition of protein-only RNase P with Gambogic acid and Juglone
To Be Published

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PDB entries from 2024-10-30

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