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PDB: 17170 results

8W04
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Crystal structure of DUF1735-domain containing protein (GH18-like) from Bacteroides faecium at 2.9 A resolution (Space group P21)
Descriptor: DUF1735 domain-containing protein
Authors:Sastre, D.E, Navarro, M.V.A.S, Sultana, N, Sundberg, E.J.
Deposit date:2024-02-13
Release date:2024-05-29
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate.
Nat Commun, 15, 2024
6CRW
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BU of 6crw by Molmil
SARS Spike Glycoprotein, Stabilized variant, single upwards S1 CTD conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin, ...
Authors:Kirchdoerfer, R.N, Wang, N, Pallesen, J, Turner, H.L, Cottrell, C.A, McLellan, J.S, Ward, A.B.
Deposit date:2018-03-19
Release date:2018-04-11
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis.
Sci Rep, 8, 2018
8VE3
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BU of 8ve3 by Molmil
Unliganded human transthyretin in the compressed conformation
Descriptor: Transthyretin
Authors:Basanta, B, Nugroho, K, Yan, N, Kline, G.M, Tsai, F.J, Wu, M, Kelly, J.W, Lander, G.C.
Deposit date:2023-12-18
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The conformational landscape of human transthyretin revealed by cryo-EM
To Be Published
8VE1
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BU of 8ve1 by Molmil
Human transthyretin covalently modified with A2-derived stilbene in the canonical conformation
Descriptor: 3-(dimethylamino)-5-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]benzoic acid, Transthyretin
Authors:Basanta, B, Nugroho, K, Yan, N, Kline, G.M, Tsai, F.J, Wu, M, Kelly, J.W, Lander, G.C.
Deposit date:2023-12-18
Release date:2024-06-05
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:The conformational landscape of human transthyretin revealed by cryo-EM
To Be Published
8VE4
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BU of 8ve4 by Molmil
Unliganded human transthyretin in the frayed conformation
Descriptor: Transthyretin
Authors:Basanta, B, Nugroho, K, Yan, N, Kline, G.M, Tsai, F.J, Wu, M, Kelly, J.W, Lander, G.C.
Deposit date:2023-12-18
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The conformational landscape of human transthyretin revealed by cryo-EM
To Be Published
8VE5
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BU of 8ve5 by Molmil
(Biarylamine-FT2-WT)1(C10A)3-human transthyretin in the compressed conformation
Descriptor: 2-[(3,5-DICHLORO-4-TRIOXIDANYLPHENYL)AMINO]BENZOIC ACID, Transthyretin
Authors:Basanta, B, Nugroho, K, Yan, N, Kline, G.M, Tsai, F.J, Wu, M, Kelly, J.W, Lander, G.C.
Deposit date:2023-12-18
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The conformational landscape of human transthyretin revealed by cryo-EM
To Be Published
8VE2
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BU of 8ve2 by Molmil
Unliganded human transthyretin in the canonical conformation
Descriptor: Transthyretin
Authors:Basanta, B, Nugroho, K, Yan, N, Kline, G.M, Tsai, F.J, Wu, M, Kelly, J.W, Lander, G.C.
Deposit date:2023-12-18
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The conformational landscape of human transthyretin revealed by cryo-EM
To Be Published
8VE6
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BU of 8ve6 by Molmil
(Biarylamine-FT2-WT)1(C10A)3-human transthyretin in the frayed conformation
Descriptor: 2-[(3,5-DICHLORO-4-TRIOXIDANYLPHENYL)AMINO]BENZOIC ACID, Transthyretin
Authors:Basanta, B, Nugroho, K, Yan, N, Kline, G.M, Tsai, F.J, Wu, M, Kelly, J.W, Lander, G.C.
Deposit date:2023-12-18
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:The conformational landscape of human transthyretin revealed by cryo-EM
To Be Published
6D2W
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BU of 6d2w by Molmil
Crystal structure of Prevotella bryantii endo-beta-mannanase/endo-beta-glucanase PbGH26A-GH5A
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Aryl-phospho-beta-D-glucosidase BglC, GH1 family, ...
Authors:Stogios, P.J, Skarina, T, McGregor, N, Nocek, B, Di Leo, R, Brumer, H, Savchenko, A.
Deposit date:2018-04-14
Release date:2019-10-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Prevotella bryantii endo-beta-mannanase/endo-beta-glucanase PbGH26A-GH5A
To Be Published
8VAE
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BU of 8vae by Molmil
Cryogenic electron microscopy structure of human serum albumin in complex with salicylic acid
Descriptor: 2-HYDROXYBENZOIC ACID, Serum albumin
Authors:Catalano, C, Lucier, K.W, To, D, Senko, S, Tran, N.L, Farwell, A.C, Silva, S.M, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2023-12-11
Release date:2024-06-26
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The CryoEM structure of human serum albumin in complex with ligands.
J.Struct.Biol., 216, 2024
8VAF
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BU of 8vaf by Molmil
Cryogenic electron microscopy structure of apo human serum albumin
Descriptor: Serum albumin
Authors:Catalano, C, Lucier, K.W, To, D, Senko, S, Tran, N.L, Farwell, A.C, Silva, S.M, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2023-12-11
Release date:2024-06-26
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The CryoEM structure of human serum albumin in complex with ligands.
J.Struct.Biol., 216, 2024
6CMY
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BU of 6cmy by Molmil
Solution NMR Structure Determination of Mouse Melanoregulin
Descriptor: Melanoregulin
Authors:Rout, A.K, Wu, X, Strub, M.P, Starich, M.R, Hammer III, J.A, Tjandra, N.
Deposit date:2018-03-06
Release date:2018-09-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Structure of Melanoregulin Reveals a Role for Cholesterol Recognition in the Protein's Ability to Promote Dynein Function.
Structure, 26, 2018
8VAC
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BU of 8vac by Molmil
Cryogenic electron microscopy structure of human serum albumin in complex with teniposide
Descriptor: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-(thiophen-2-ylmethylidene)-beta-D-glucopyranoside, Serum albumin
Authors:Catalano, C, Lucier, K.W, To, D, Senko, S, Tran, N.L, Farwell, A.C, Silva, S.M, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2023-12-11
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The CryoEM structure of human serum albumin in complex with ligands.
J.Struct.Biol., 216, 2024
1YKG
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BU of 1ykg by Molmil
Solution structure of the flavodoxin-like domain from the Escherichia coli sulfite reductase
Descriptor: FLAVIN MONONUCLEOTIDE, Sulfite reductase [NADPH] flavoprotein alpha-component
Authors:Sibille, N, Blackledge, M, Brutscher, B, Coves, J, Bersch, B.
Deposit date:2005-01-18
Release date:2005-07-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the Sulfite Reductase Flavodoxin-like Domain from Escherichia coli
Biochemistry, 44, 2005
8VVA
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BU of 8vva by Molmil
Structure of DUF1480 domain-containing protein from Klebsiella pneumoniae subsp. pneumoniae SA1
Descriptor: DUF1480 domain-containing protein, YebV family
Authors:Semper, C, Savchenko, A, Watanabe, N, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-01-30
Release date:2024-06-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of DUF1480 domain-containing protein from Klebsiella pneumoniae subsp. pneumoniae SA1
To Be Published
7ZEM
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BU of 7zem by Molmil
Structure of a parallel G-quadruplex with a snapback loop
Descriptor: DNA (5'-D(*(DT5)P*GP*GP*CP*TP*AP*GP*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3')
Authors:Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K.
Deposit date:2022-03-31
Release date:2022-06-15
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Guiding the folding of G-quadruplexes through loop residue interactions.
Nucleic Acids Res., 50, 2022
7ZEO
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BU of 7zeo by Molmil
Structure of a hybrid-type G-quadruplex with a snapback loop and an all-syn G-column (hybrid-1R)
Descriptor: DNA (5'-D(*(DG5)P*(BGM)P*CP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3')
Authors:Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K.
Deposit date:2022-03-31
Release date:2022-06-15
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Guiding the folding of G-quadruplexes through loop residue interactions.
Nucleic Acids Res., 50, 2022
7ZEK
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BU of 7zek by Molmil
Structure of a hybrid-type G-quadruplex with a snapback loop (hybrid 1R')
Descriptor: DNA (5'-D(*(DG5)P*GP*CP*TP*AP*(BG)P*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3')
Authors:Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K.
Deposit date:2022-03-31
Release date:2022-06-22
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Guiding the folding of G-quadruplexes through loop residue interactions.
Nucleic Acids Res., 50, 2022
6D4M
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BU of 6d4m by Molmil
Crystal Structure of a Fc Fragment of Rhesus macaque (Macaca mulatta) IgG3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Fc fragment of IgG3
Authors:Gohain, N, Tolbert, W.D, Pazgier, M.
Deposit date:2018-04-18
Release date:2019-05-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.47 Å)
Cite:From Rhesus macaque to human: structural evolutionary pathways for immunoglobulin G subclasses.
Mabs, 11, 2019
8VS5
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BU of 8vs5 by Molmil
Structure of catalytic domain of telomere resolvase, ResT, from Borrelia garinii
Descriptor: Telomere resolvase ResT
Authors:Semper, C, Savchenko, A, Watanabe, N, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-01-23
Release date:2024-07-17
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (2.796 Å)
Cite:Structure analysis of the telomere resolvase from the Lyme disease spirochete Borrelia garinii reveals functional divergence of its C-terminal domain.
Nucleic Acids Res., 52, 2024
8VJ1
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BU of 8vj1 by Molmil
Structure of C-terminal domain of telomere resolvase, ResT, from Borrelia garinii
Descriptor: Telomere resolvase ResT
Authors:Semper, C, Savchenko, A, Watanabe, N, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-01-05
Release date:2024-07-17
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structure analysis of the telomere resolvase from the Lyme disease spirochete Borrelia garinii reveals functional divergence of its C-terminal domain.
Nucleic Acids Res., 52, 2024
6DEI
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BU of 6dei by Molmil
Structure of Dse3-Csm1 complex
Descriptor: ACETATE ION, Monopolin complex subunit CSM1, Protein DSE3, ...
Authors:Singh, N, Corbett, K.D.
Deposit date:2018-05-12
Release date:2018-10-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:The budding-yeast RWD protein Csm1 scaffolds diverse protein complexes through a conserved structural mechanism.
Protein Sci., 27, 2018
1YNN
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BU of 1ynn by Molmil
Taq RNA polymerase-rifampicin complex
Descriptor: DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
Authors:Campbell, E.A, Pavlova, O, Zenkin, N, Leon, F, Irschik, H, Jansen, R, Severinov, K, Darst, S.A.
Deposit date:2005-01-24
Release date:2005-03-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural, functional, and genetic analysis of sorangicin inhibition of bacterial RNA polymerase
Embo J., 24, 2005
6BZV
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BU of 6bzv by Molmil
Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the GL precursor of the broadly neutralizing antibody 19B3
Descriptor: 19B3 GL Heavy Chain, 19B3 GL Light Chain, E2 AS412 peptide
Authors:Tzarum, N, Aleman, F, Wilson, I.A, Law, M.
Deposit date:2017-12-26
Release date:2018-06-20
Last modified:2022-02-02
Method:X-RAY DIFFRACTION (2.654 Å)
Cite:Immunogenetic and structural analysis of a class of HCV broadly neutralizing antibodies and their precursors.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7ZOS
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BU of 7zos by Molmil
Class 1 Phytoglobin from Sugar beet (BvPgb1.2)
Descriptor: CYANIDE ION, HEXACYANOFERRATE(3-), Non-symbiotic hemoglobin class 1, ...
Authors:Nyblom, M, Christensen, S, Eriksson, N, Bulow, L.
Deposit date:2022-04-26
Release date:2022-09-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Oxidative Implications of Substituting a Conserved Cysteine Residue in Sugar Beet Phytoglobin BvPgb 1.2.
Antioxidants, 11, 2022

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PDB entries from 2024-10-30

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