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PDB: 87 results

4ZQ9
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BU of 4zq9 by Molmil
X-ray structure of AAV-2 OBD bound to AAVS1 site 3:1
Descriptor: DNA (5'-D(*CP*GP*CP*CP*CP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*GP*GP*GP*C)-3'), MANGANESE (II) ION, ...
Authors:Musayev, F.N, Zarate-Perez, F, Escalante, C.R.
Deposit date:2015-05-08
Release date:2015-09-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Insights into the Assembly of the Adeno-associated Virus Type 2 Rep68 Protein on the Integration Site AAVS1.
J.Biol.Chem., 290, 2015
6NP6
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BU of 6np6 by Molmil
Crystal structure of the sensor domain of the transcriptional regulator HcpR from Porphyromonas Gingivalis
Descriptor: Crp/Fnr family transcriptional regulator, GLYCEROL
Authors:Musayev, F.N, Belvin, B.R, Escalante, C.R, Turner, J, Scarsdale, J.N, Lewis, J.P.
Deposit date:2019-01-17
Release date:2019-06-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Nitrosative Stress Sensing in Porphyromonas gingivalis: Structure and Mechanisms of the Heme Binding Transcriptional Regulator HcpR.
Acta Crystallogr D Struct Biol, 75, 2019
4ZO0
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BU of 4zo0 by Molmil
X-ray Structure of AAV-2 Origin Binding Domain
Descriptor: ISOPROPYL ALCOHOL, MAGNESIUM ION, Protein Rep68
Authors:Musayev, F.N, Zarate-Perez, F, Escalante, C.R.
Deposit date:2015-05-05
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Studies of AAV2 Rep68 Reveal a Partially Structured Linker and Compact Domain Conformation.
Biochemistry, 54, 2015
5BYG
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BU of 5byg by Molmil
X-ray structure of AAV2 OBD-AAVS1 complex 2:1
Descriptor: CITRIC ACID, DNA (5'-D(*CP*TP*CP*GP*GP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*T)-3'), DNA (5'-D(*GP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*GP*CP*CP*GP*A)-3'), ...
Authors:Musayev, F.N, Escalante, C.R.
Deposit date:2015-06-10
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights into the Assembly of the Adeno-associated Virus Type 2 Rep68 Protein on the Integration Site AAVS1.
J.Biol.Chem., 290, 2015
5DCX
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BU of 5dcx by Molmil
Structural studies of AAV2 Rep68 reveal a partially structured linker and compact domain conformation
Descriptor: MAGNESIUM ION, Protein Rep68
Authors:Musayev, F.N, Zarate-Perez, F.
Deposit date:2015-08-24
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Studies of AAV2 Rep68 Reveal a Partially Structured Linker and Compact Domain Conformation.
Biochemistry, 54, 2015
6BWU
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BU of 6bwu by Molmil
Crystal structure of carboxyhemoglobin in complex with beta Cys93 modifying agent, TD3
Descriptor: 1H-1,2,3-triazole-5-thiol, CARBON MONOXIDE, Hemoglobin subunit alpha, ...
Authors:Musayev, F.N, Safo, R.M, Safo, M.K.
Deposit date:2017-12-15
Release date:2018-01-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Triazole Disulfide Compound Increases the Affinity of Hemoglobin for Oxygen and Reduces the Sickling of Human Sickle Cells.
Mol. Pharm., 15, 2018
1NRG
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BU of 1nrg by Molmil
Structure and Properties of Recombinant Human Pyridoxine-5'-Phosphate Oxidase
Descriptor: BETA-MERCAPTOETHANOL, FLAVIN MONONUCLEOTIDE, PHOSPHATE ION, ...
Authors:Musayev, F.N, di Salvo, M.L, Ko, T.P, Schirch, V, Safo, M.K.
Deposit date:2003-01-24
Release date:2003-02-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and properties of recombinant human pyridoxine 5'-phosphate oxidase.
Protein Sci., 12, 2003
6BWP
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BU of 6bwp by Molmil
Crystal structure of Deoxy Hemoglobin in complex with beta Cys93 modifying agent, TD3
Descriptor: 1H-1,2,3-triazole-5-thiol, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Musayev, F.N, Safo, R.M, Safo, M.K.
Deposit date:2017-12-15
Release date:2018-01-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Triazole Disulfide Compound Increases the Affinity of Hemoglobin for Oxygen and Reduces the Sickling of Human Sickle Cells.
Mol. Pharm., 15, 2018
7K4M
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BU of 7k4m by Molmil
Crystal structure of MetAP2 Modified Hemoglobin S
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Musayev, F.N, Safo, M.K, Light, D.R.
Deposit date:2020-09-15
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:MetAP2 inhibition modifies hemoglobin S to delay polymerization and improves blood flow in sickle cell disease.
Blood Adv, 5, 2021
7JLY
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BU of 7jly by Molmil
Crystal Structure of RNA Binding Protein PG1
Descriptor: ACETATE ION, CALCIUM ION, RNA-binding protein
Authors:Musayev, F.N, Scarsdale, J.N, Belvin, B.R, Lewis, J.P.
Deposit date:2020-07-30
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:High Resolution Structure of RNA Binding Protein PG1
To be published
5V30
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BU of 5v30 by Molmil
Crystal structure of the sensor domain of the transcriptional regulator HcpR from Porphyromonas Gingivalis
Descriptor: GLYCEROL, SULFATE ION, Transcriptional regulator
Authors:Musayev, F.N, Belvin, B.R, Escalante, C.R, Turner, J, Lewis, J.P.
Deposit date:2017-03-06
Release date:2018-06-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Nitrosative stress sensing in Porphyromonas gingivalis: structure of and heme binding by the transcriptional regulator HcpR.
Acta Crystallogr D Struct Biol, 75, 2019
5V6G
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BU of 5v6g by Molmil
Crystal structure of Influenza A virus Matrix Protein M1(NLS-88R)
Descriptor: Matrix protein 1
Authors:Musayev, F.N, Safo, M.K, Desai, U.R, Xie, H, Mosier, P.D, Chiang, M.-J.
Deposit date:2017-03-16
Release date:2017-04-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Maintaining pH-dependent conformational flexibility of M1 is critical for efficient influenza A virus replication.
Emerg Microbes Infect, 6, 2017
5V7S
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BU of 5v7s by Molmil
Crystal structure of Influenza A virus matrix protein M1 (NLS-88E, pH 6.2)
Descriptor: Matrix protein 1, PHOSPHATE ION
Authors:Musayev, F.N, Safo, M.K, Althufairi, B, Desai, U.R, Xie, H, Mosier, P.D, Chiang, M.-J, Zhou, Q.
Deposit date:2017-03-20
Release date:2017-04-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Maintaining pH-dependent conformational flexibility of M1 is critical for efficient influenza A virus replication.
Emerg Microbes Infect, 6, 2017
5V8A
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BU of 5v8a by Molmil
Crystal structure of Influenza A virus matrix protein M1 (NLS-88R, pH 7.3)
Descriptor: Matrix protein 1
Authors:Musayev, F.N, Safo, M.K, Desai, U.R, Xie, H, Mosier, P.D, Zhou, Q, Chiang, M.-J, Kosikova, M.
Deposit date:2017-03-21
Release date:2017-04-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Maintaining pH-dependent conformational flexibility of M1 is critical for efficient influenza A virus replication.
Emerg Microbes Infect, 6, 2017
5V7B
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BU of 5v7b by Molmil
Crystal structure of Influenza A virus matrix protein M1 (NLS-88E)
Descriptor: Matrix protein 1
Authors:Musayev, F.N, Safo, M.K, Desai, U.R, Xie, H, Mosier, P.D, Chiang, M.-J.
Deposit date:2017-03-20
Release date:2017-04-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Maintaining pH-dependent conformational flexibility of M1 is critical for efficient influenza A virus replication.
Emerg Microbes Infect, 6, 2017
4PUS
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BU of 4pus by Molmil
Crystal Structure of Influenza A Virus Matrix Protein M1
Descriptor: Matrix protein 1
Authors:Safo, M.K, Musayev, F.N, Mosier, P.D, Xie, H, Desai, U.R.
Deposit date:2014-03-13
Release date:2014-10-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of influenza a virus matrix protein m1: variations on a theme.
Plos One, 9, 2014
8EGI
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BU of 8egi by Molmil
X-ray structure of carbonmonoxy hemoglobin in complex with VZHE039-NO
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Donkor, A.K, Musayev, F.N, Safo, M.K.
Deposit date:2022-09-12
Release date:2022-11-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design, Synthesis, and Investigation of Novel Nitric Oxide (NO)-Releasing Aromatic Aldehydes as Drug Candidates for the Treatment of Sickle Cell Disease.
Molecules, 27, 2022
1DNL
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BU of 1dnl by Molmil
X-RAY STRUCTURE OF ESCHERICHIA COLI PYRIDOXINE 5'-PHOSPHATE OXIDASE COMPLEXED WITH FMN AT 1.8 ANGSTROM RESOLUTION
Descriptor: FLAVIN MONONUCLEOTIDE, PHOSPHATE ION, PYRIDOXINE 5'-PHOSPHATE OXIDASE
Authors:Safo, M.K, Mathews, I, Musayev, F.N, di Salvo, M.L, Thiel, D.J, Abraham, D.J, Schirch, V.
Deposit date:1999-12-16
Release date:2000-01-05
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray structure of Escherichia coli pyridoxine 5'-phosphate oxidase complexed with FMN at 1.8 A resolution.
Structure Fold.Des., 8, 2000
3TPZ
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BU of 3tpz by Molmil
2.1 Angstrom crystal structure of the L114P mutant of E. Coli KsgA
Descriptor: CHLORIDE ION, PHOSPHATE ION, Ribosomal RNA small subunit methyltransferase A
Authors:Scarsdale, J.N, Musayev, F.N, Rife, J.P.
Deposit date:2011-09-08
Release date:2012-02-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Control of Substrate Specificity by a Single Active Site Residue of the KsgA Methyltransferase.
Biochemistry, 51, 2012
6XB8
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BU of 6xb8 by Molmil
Adeno-Associated Virus Origin Binding Domain in complex with ssDNA
Descriptor: DNA (5'-D(*GP*CP*TP*CP*TP*T)-3'), Protein Rep68, ZINC ION
Authors:Escalante, C.R, Musayev, F.N.
Deposit date:2020-06-05
Release date:2020-12-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.
Nucleic Acids Res., 48, 2020
6XE7
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BU of 6xe7 by Molmil
Carbonmonoxy hemoglobin in complex with the antisickling agent methyl 2-((2-formyl-3-hydroxyphenoxy)methyl)nicotinate
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Pagare, P.P, Safo, M.K, Musayev, F.N.
Deposit date:2020-06-12
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Exploration of Structure-Activity Relationship of Aromatic Aldehydes Bearing Pyridinylmethoxy-Methyl Esters as Novel Antisickling Agents.
J.Med.Chem., 63, 2020
3ONZ
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BU of 3onz by Molmil
Human tetrameric hemoglobin: proximal nitrite ligand at beta
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, NITRITE ION, ...
Authors:Yi, J, Thormas, L.M, Safo, M.K, Musayev, F.N, Richter-Addo, G.B.
Deposit date:2010-08-30
Release date:2011-09-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.087 Å)
Cite:Crystallographic Trapping of Heme Loss Intermediates during the Nitrite-Induced Degradation of Human Hemoglobin.
Biochemistry, 50, 2011
6XD9
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BU of 6xd9 by Molmil
Carbonmonoxy hemoglobin in complex with the antisickling agent 2-hydroxy-6-((6-(hydroxymethyl)pyridin-2-yl)methoxy)benzaldehyde (VZHE039)
Descriptor: 3-{[6-(hydroxymethyl)pyridin-2-yl]methoxy}-2-methylphenol, CARBON MONOXIDE, Hemoglobin subunit alpha, ...
Authors:Pagare, P.P, Safo, M.K, Musayev, F.N.
Deposit date:2020-06-10
Release date:2020-12-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:VZHE-039, a novel antisickling agent that prevents erythrocyte sickling under both hypoxic and anoxic conditions.
Sci Rep, 10, 2020
6XDT
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BU of 6xdt by Molmil
Carbonmonoxy hemoglobin in complex with the antisickling agent methyl 5-((2-formyl-4-methoxyphenoxy)methyl)picolinate
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Pagare, P.P, Safo, M.K, Musayev, F.N.
Deposit date:2020-06-11
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Exploration of Structure-Activity Relationship of Aromatic Aldehydes Bearing Pyridinylmethoxy-Methyl Esters as Novel Antisickling Agents.
J.Med.Chem., 63, 2020
3R5I
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BU of 3r5i by Molmil
Crystal structure of liganded Hemoglobin complexed with a potent Antisickling agent, INN-312
Descriptor: 5-methoxy-2-(pyridin-3-ylmethoxy)benzaldehyde, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Safo, M.K, Musayev, F.N, Safo, R.P, Daniels, D, Eseonu, D.N, Parra, J.
Deposit date:2011-03-18
Release date:2011-04-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and in Vitro Chracterization of Pyridyl Derivatives of Benzaldehydes : Highly Potent Antisickling Agents
To be Published

 

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PDB entries from 2024-07-17

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