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PDB: 209 results

3QZL
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BU of 3qzl by Molmil
Staphylococcus aureus IsdA NEAT domain K75A variant in complex with heme
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE
Authors:Grigg, J.C, Mao, C.X, Murphy, M.E.P.
Deposit date:2011-03-06
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011
4HOV
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BU of 4hov by Molmil
DypB N246A in complex with manganese
Descriptor: CHLORIDE ION, DypB, FORMIC ACID, ...
Authors:Grigg, J.C, Singh, R, Eltis, L.D, Murphy, M.E.P.
Deposit date:2012-10-22
Release date:2013-01-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Improved Manganese-Oxidizing Activity of DypB, a Peroxidase from a Lignolytic Bacterium.
Acs Chem.Biol., 8, 2013
1SNR
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BU of 1snr by Molmil
Nitric oxide bound to Cu nitrite reductase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Rosell, F.I, Mauk, A.G, Murphy, M.E.
Deposit date:2004-03-11
Release date:2004-06-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Side-on copper-nitrosyl coordination by nitrite reductase.
Science, 304, 2004
3NRP
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BU of 3nrp by Molmil
Crystal structure of 'as isolated' uropathogenic E. coli strain F11 FetP recombinantly expressed in the periplasm of E. coli BL21(DE3)
Descriptor: Periplasmic protein-probably involved in high-affinity Fe2+ transport
Authors:Chan, A.C.K, Murphy, M.E.P.
Deposit date:2010-06-30
Release date:2011-05-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Characterization of a Dipartite Iron Uptake System from Uropathogenic Escherichia coli Strain F11.
J.Biol.Chem., 286, 2011
3NRQ
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BU of 3nrq by Molmil
Crystal structure of copper-reconstituted FetP from uropathogenic Escherichia coli strain F11
Descriptor: COPPER (II) ION, Periplasmic protein-probably involved in high-affinity Fe2+ transport
Authors:Chan, A.C.K, Murphy, M.E.P.
Deposit date:2010-06-30
Release date:2011-05-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Characterization of a Dipartite Iron Uptake System from Uropathogenic Escherichia coli Strain F11.
J.Biol.Chem., 286, 2011
3LGM
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BU of 3lgm by Molmil
Crystal structure of reduced IsdI in complex with heme
Descriptor: Heme-degrading monooxygenase isdI, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ukpabi, G.N, Murphy, M.E.P.
Deposit date:2010-01-20
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The IsdG-family of haem oxygenases degrades haem to a novel chromophore
Mol.Microbiol., 75, 2010
3LGN
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BU of 3lgn by Molmil
Crystal structure of IsdI in complex with heme
Descriptor: Heme-degrading monooxygenase isdI, MAGNESIUM ION, OXYGEN MOLECULE, ...
Authors:Ukpabi, G.N, Murphy, M.E.P.
Deposit date:2010-01-20
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The IsdG-family of haem oxygenases degrades haem to a novel chromophore
Mol.Microbiol., 75, 2010
1D4N
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BU of 1d4n by Molmil
HUMAN SERUM TRANSFERRIN
Descriptor: CARBONATE ION, FE (III) ION, TRANSFERRIN
Authors:Yang, H.-W, MacGillivray, R.T.A, Chen, J, Luo, Y, Wang, Y, Brayer, G.D, Mason, A, Woodworth, R.C, Murphy, M.E.P.
Deposit date:1999-10-04
Release date:2000-03-01
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of two mutants (K206Q, H207E) of the N-lobe of human transferrin with increased affinity for iron.
Protein Sci., 9, 2000
1D3K
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BU of 1d3k by Molmil
HUMAN SERUM TRANSFERRIN
Descriptor: CARBONATE ION, FE (III) ION, SERUM TRANSFERRIN
Authors:Yang, H.-W, MacGillivray, R.T.A, Chen, J, Luo, Y, Wang, Y, Brayer, G.D, Mason, A, Woodworth, R.C, Murphy, M.E.P.
Deposit date:1999-09-29
Release date:2000-03-01
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of two mutants (K206Q, H207E) of the N-lobe of human transferrin with increased affinity for iron.
Protein Sci., 9, 2000
4FNI
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BU of 4fni by Molmil
Crystal structure of IsdI-W66Y in complex with heme and cyanide
Descriptor: CYANIDE ION, Heme-degrading monooxygenase isdI, MAGNESIUM ION, ...
Authors:Ukpabi, G.N, Murphy, M.E.P.
Deposit date:2012-06-19
Release date:2012-08-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Inactivation of the heme degrading enzyme IsdI by an active site substitution that diminishes heme ruffling.
J.Biol.Chem., 287, 2012
4FNH
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BU of 4fnh by Molmil
Crystal structure of IsdI-W66Y in complex with heme
Descriptor: Heme-degrading monooxygenase isdI, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ukpabi, G.N, Murphy, M.E.P.
Deposit date:2012-06-19
Release date:2012-08-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Inactivation of the heme degrading enzyme IsdI by an active site substitution that diminishes heme ruffling.
J.Biol.Chem., 287, 2012
5TWB
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BU of 5twb by Molmil
Oxidoreductase IruO in the reduced form
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, GLYCEROL
Authors:Kobylarz, M.J, Heieis, G.A, Loutet, S.A, Murphy, M.E.P.
Deposit date:2016-11-12
Release date:2017-10-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:Iron Uptake Oxidoreductase (IruO) Uses a Flavin Adenine Dinucleotide Semiquinone Intermediate for Iron-Siderophore Reduction.
ACS Chem. Biol., 12, 2017
5TWC
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BU of 5twc by Molmil
Oxidoreductase IruO in the oxidized form
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase
Authors:Kobylarz, M.J, Heieis, G.A, Loutet, S.A, Murphy, M.E.P.
Deposit date:2016-11-12
Release date:2017-10-04
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Iron Uptake Oxidoreductase (IruO) Uses a Flavin Adenine Dinucleotide Semiquinone Intermediate for Iron-Siderophore Reduction.
ACS Chem. Biol., 12, 2017
3QGP
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BU of 3qgp by Molmil
Crystal structure of IsdI in complex with heme and cyanide
Descriptor: CYANIDE ION, Heme-degrading monooxygenase isdI, MAGNESIUM ION, ...
Authors:Ukpabi, G.N, Murphy, M.E.P.
Deposit date:2011-01-24
Release date:2011-07-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Heme Ruffling Enables the Catalytic Activity of the Heme Degrading Enzyme IsdI
To be Published
4OND
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BU of 4ond by Molmil
Ancestral Steroid Receptor 2 DBD helix mutant - ERE DNA complex
Descriptor: 5'-D(*CP*CP*AP*GP*GP*TP*CP*AP*GP*AP*GP*TP*GP*AP*CP*CP*TP*G)-3', 5'-D(*TP*CP*AP*GP*GP*TP*CP*AP*CP*TP*CP*TP*GP*AP*CP*CP*TP*G)-3', Ancestral SR2 Helix Mutant, ...
Authors:Ortlund, E.O, Murphy, M.N.
Deposit date:2014-01-28
Release date:2014-10-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.253 Å)
Cite:Evolution of DNA specificity in a transcription factor family produced a new gene regulatory module.
Cell(Cambridge,Mass.), 159, 2014
2Q8P
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BU of 2q8p by Molmil
Crystal Structure of selenomethionine labelled S. aureus IsdE complexed with heme
Descriptor: Iron-regulated surface determinant E, PROTOPORPHYRIN IX CONTAINING FE
Authors:Grigg, J.C, Murphy, M.E.
Deposit date:2007-06-11
Release date:2007-07-31
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Heme Coordination by Staphylococcus aureus IsdE.
J.Biol.Chem., 282, 2007
4OOR
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BU of 4oor by Molmil
Ancestral Steroid Receptor 2 DNA binding domain in complex with a steroid response element
Descriptor: 5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*GP*AP*GP*TP*GP*TP*TP*CP*TP*G)-3', 5'-D(*TP*CP*AP*GP*AP*AP*CP*AP*CP*TP*CP*TP*GP*TP*TP*CP*TP*G)-3', Ancestral Steroid Receptor 2 DNA binding domain, ...
Authors:Ortlund, E.O, Murphy, M.N.
Deposit date:2014-02-03
Release date:2014-10-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Evolution of DNA specificity in a transcription factor family produced a new gene regulatory module.
Cell(Cambridge,Mass.), 159, 2014
4OLN
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BU of 4oln by Molmil
Ancestral Steroid Receptor 1 in complex with estrogen response element DNA
Descriptor: 5'-D(*CP*CP*AP*GP*GP*TP*CP*AP*GP*AP*GP*TP*GP*AP*CP*CP*TP*GP*A)-3', 5'-D(*TP*CP*AP*GP*GP*TP*CP*AP*CP*TP*CP*TP*GP*AP*CP*CP*TP*GP*G)-3', AncSR1, ...
Authors:Ortlund, E.O, Murphy, M.N.
Deposit date:2014-01-24
Release date:2014-10-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Evolution of DNA specificity in a transcription factor family produced a new gene regulatory module.
Cell(Cambridge,Mass.), 159, 2014
2OWS
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BU of 2ows by Molmil
Crystal structure of Bordetella pertussis holo ferric binding protein bound with two synergistic oxalate anions
Descriptor: FE (III) ION, OXALATE ION, Putative iron binding protein
Authors:Tom-Yew, S.A.L, Murphy, M.E.P.
Deposit date:2007-02-16
Release date:2008-02-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Anion-dependent hinge motion in ferric binding proteins
To be Published
2Q8Q
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BU of 2q8q by Molmil
Crystal Structure of S. aureus IsdE complexed with heme
Descriptor: Iron-regulated surface determinant E, PROTOPORPHYRIN IX CONTAINING FE
Authors:Grigg, J.C, Murphy, M.E.
Deposit date:2007-06-11
Release date:2007-07-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Heme Coordination by Staphylococcus aureus IsdE.
J.Biol.Chem., 282, 2007
5TO3
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BU of 5to3 by Molmil
Crystal structure of thrombin mutant W215A/E217A fused to EGF456 of thrombomodulin via a 31-residue linker and bound to PPACK
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, ...
Authors:Barranco-Medina, S, Murphy, M, Pelc, L, Chen, Z, Di Cera, E, Pozzi, N.
Deposit date:2016-10-16
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Rational Design of Protein C Activators.
Sci Rep, 7, 2017
2OWT
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BU of 2owt by Molmil
Crystal structure of Bordetella pertussis holo ferric binding protein with bound synergistic carbonate anion
Descriptor: CARBONATE ION, FE (III) ION, Putative iron binding protein
Authors:Tom-Yew, S.A.L, Murphy, M.E.P.
Deposit date:2007-02-16
Release date:2008-02-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Anion-dependent hinge motion in ferric binding proteins
To be Published
4R5K
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BU of 4r5k by Molmil
Crystal structure of the DnaK C-terminus (Dnak-SBD-B)
Descriptor: CALCIUM ION, Chaperone protein DnaK, SULFATE ION
Authors:Leu, J.I, Zhang, P, Murphy, M.E, Marmorstein, R, George, D.L.
Deposit date:2014-08-21
Release date:2014-09-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7469 Å)
Cite:Structural Basis for the Inhibition of HSP70 and DnaK Chaperones by Small-Molecule Targeting of a C-Terminal Allosteric Pocket.
Acs Chem.Biol., 9, 2014
4PO2
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BU of 4po2 by Molmil
Crystal Structure of the Stress-Inducible Human Heat Shock Protein HSP70 Substrate-Binding Domain in Complex with Peptide Substrate
Descriptor: HSP70 substrate peptide, Heat shock 70 kDa protein 1A/1B, PHOSPHATE ION, ...
Authors:Zhang, P, Leu, J.I, Murphy, M.E, George, D.L, Marmorstein, R.
Deposit date:2014-02-24
Release date:2014-08-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the stress-inducible human heat shock protein 70 substrate-binding domain in complex with Peptide substrate.
Plos One, 9, 2014
4M54
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BU of 4m54 by Molmil
The structure of the staphyloferrin B precursor biosynthetic enzyme SbnB bound to N-(1-amino-1-carboxyl-2-ethyl)-glutamic acid and NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CHLORIDE ION, N-[(2S)-2-amino-2-carboxyethyl]-L-glutamic acid, ...
Authors:Kobylarz, M.J, Murphy, M.E.P.
Deposit date:2013-08-07
Release date:2014-07-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Synthesis of L-2,3-diaminopropionic acid, a siderophore and antibiotic precursor.
Chem.Biol., 21, 2014

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