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PDB: 5 results

5TO3
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BU of 5to3 by Molmil
Crystal structure of thrombin mutant W215A/E217A fused to EGF456 of thrombomodulin via a 31-residue linker and bound to PPACK
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, ...
Authors:Barranco-Medina, S, Murphy, M, Pelc, L, Chen, Z, Di Cera, E, Pozzi, N.
Deposit date:2016-10-16
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Rational Design of Protein C Activators.
Sci Rep, 7, 2017
4RN6
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BU of 4rn6 by Molmil
Structure of prethrombin-2 mutant s195a bound to the active site inhibitor argatroban
Descriptor: (2R,4R)-4-methyl-1-(N~2~-{[(3S)-3-methyl-1,2,3,4-tetrahydroquinolin-8-yl]sulfonyl}-L-arginyl)piperidine-2-carboxylic acid, Thrombin heavy chain
Authors:Pozzi, N, Chen, Z, Zapata, F, Niu, W, Barranco-Medina, S, Pelc, L.A, Di Cera, E.
Deposit date:2014-10-23
Release date:2014-11-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Autoactivation of thrombin precursors.
J.Biol.Chem., 288, 2013
4DT7
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BU of 4dt7 by Molmil
Crystal structure of thrombin bound to the activation domain QEDQVDPRLIDGKMTRRGDS of protein C
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, SODIUM ION, ...
Authors:Pozzi, N, Barranco-Medina, S, Chen, Z, Di Cera, E.
Deposit date:2012-02-20
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Exposure of R169 controls protein C activation and autoactivation.
Blood, 120, 2012
2PWJ
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BU of 2pwj by Molmil
Structure of a mitochondrial type II peroxiredoxin from Pisum sativum
Descriptor: Mitochondrial peroxiredoxin
Authors:Lopez-Jaramillo, F.J, Barranco-Medina, S, Lazaro, J.J, Santoyo-Gonzalez, F.
Deposit date:2007-05-11
Release date:2008-05-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a mitochondrial type II peroxiredoxin from Pisum sativum
To be Published
4HFP
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BU of 4hfp by Molmil
Structure of thrombin mutant S195a bound to the active site inhibitor argatroban
Descriptor: (2R,4R)-4-methyl-1-(N~2~-{[(3S)-3-methyl-1,2,3,4-tetrahydroquinolin-8-yl]sulfonyl}-L-arginyl)piperidine-2-carboxylic acid, Prothrombin, SODIUM ION
Authors:Pozzi, N, Chen, Z, Zapata, F, Lin, W, Barranco-Medina, S, Pelc, L.A, Di Cera, E.
Deposit date:2012-10-05
Release date:2013-03-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Autoactivation of thrombin precursors.
J.Biol.Chem., 288, 2013

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