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PDB: 33 results

8CA0
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BU of 8ca0 by Molmil
Macrophage inhibitory factor (MIF) in complex with small molecule PAV174
Descriptor: 1-ethyl-9-methyl-3,7-dipyrrolidin-1-yl-phenothiazine, Macrophage migration inhibitory factor
Authors:Mueller, A, Torres, F, Roland, R, Korth, C.
Deposit date:2023-01-24
Release date:2024-02-07
Method:SOLUTION NMR
Cite:Oxidized MIF is a drug target at the molecular intersection between immune activation and tau cellular pathology
To Be Published
8F1I
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SigN RNA polymerase early-melted intermediate bound to mismatch fragment dhsU36mm1 (-12T)
Descriptor: DNA (36-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Mueller, A.U, Chen, J, Darst, S.A.
Deposit date:2022-11-05
Release date:2023-04-05
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A general mechanism for transcription bubble nucleation in bacteria.
Proc.Natl.Acad.Sci.USA, 120, 2023
8F1J
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SigN RNA polymerase early-melted intermediate bound to mismatch DNA fragment dhsU36mm2 (-12A)
Descriptor: DNA (36-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Mueller, A.U, Chen, J, Darst, S.A.
Deposit date:2022-11-05
Release date:2023-04-05
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:A general mechanism for transcription bubble nucleation in bacteria.
Proc.Natl.Acad.Sci.USA, 120, 2023
8F1K
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BU of 8f1k by Molmil
SigN RNA polymerase early-melted intermediate bound to full duplex DNA fragment dhsU36 (-12T)
Descriptor: DNA (36-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Mueller, A.U, Chen, J, Darst, S.A.
Deposit date:2022-11-05
Release date:2023-04-05
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:A general mechanism for transcription bubble nucleation in bacteria.
Proc.Natl.Acad.Sci.USA, 120, 2023
1AYF
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BU of 1ayf by Molmil
BOVINE ADRENODOXIN (OXIDIZED)
Descriptor: ADRENODOXIN, FE2/S2 (INORGANIC) CLUSTER, GLYCEROL
Authors:Mueller, A, Mueller, J.J, Heinemann, U.
Deposit date:1997-11-03
Release date:1998-12-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:New aspects of electron transfer revealed by the crystal structure of a truncated bovine adrenodoxin, Adx(4-108).
Structure, 6, 1998
6SJ9
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Proteasome accessory factor B/C (PafBC) of Arthrobacter aurescens
Descriptor: DI(HYDROXYETHYL)ETHER, POTASSIUM ION, Proteasome accessory factor B/C (PafBC), ...
Authors:Mueller, A.U, Leibundgut, M, Ban, N, Weber-Ban, E.
Deposit date:2019-08-13
Release date:2019-10-16
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and functional implications of WYL domain-containing bacterial DNA damage response regulator PafBC.
Nat Commun, 10, 2019
1PTK
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BU of 1ptk by Molmil
STUDIES ON THE INHIBITORY ACTION OF MERCURY UPON PROTEINASE K
Descriptor: CALCIUM ION, MERCURY (II) ION, PROTEINASE K
Authors:Mueller, A, Saenger, W.
Deposit date:1993-04-07
Release date:1994-01-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Studies on the inhibitory action of mercury upon proteinase K.
J.Biol.Chem., 268, 1993
2PKC
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BU of 2pkc by Molmil
CRYSTAL STRUCTURE OF CALCIUM-FREE PROTEINASE K AT 1.5 ANGSTROMS RESOLUTION
Descriptor: PROTEINASE K, SODIUM ION
Authors:Mueller, A, Hinrichs, W, Wolf, W.M, Saenger, W.
Deposit date:1993-06-04
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of calcium-free proteinase K at 1.5-A resolution.
J.Biol.Chem., 269, 1994
7P5X
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Mycobacterial RNAP with transcriptional activator PafBC
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Mueller, A.U, Kummer, E, Schilling, C.M, Ban, N, Weber-Ban, E.
Deposit date:2021-07-15
Release date:2021-12-22
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Transcriptional control of mycobacterial DNA damage response by sigma adaptation.
Sci Adv, 7, 2021
4WWS
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Structure of Chlorite dismutase-like Protein from Listeria monocytogenes
Descriptor: POTASSIUM ION, Putative heme-dependent peroxidase lmo2113
Authors:Hagmueller, A, Mlynek, G, Djinovic-Carugo, K.
Deposit date:2014-11-12
Release date:2015-02-04
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and heme-binding properties of HemQ (chlorite dismutase-like protein) from Listeria monocytogenes.
Arch.Biochem.Biophys., 574, 2015
4M07
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Crystal Structure of Mutant Chlorite Dismutase from Candidatus Nitrospira defluvii W145F
Descriptor: 1,2-ETHANEDIOL, Chlorite dismutase, GLYCEROL, ...
Authors:Hagmueller, A, Gysel, K, Djinovic-Carugo, K.
Deposit date:2013-08-01
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Manipulating conserved heme cavity residues of chlorite dismutase: effect on structure, redox chemistry, and reactivity.
Biochemistry, 53, 2014
4M06
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Crystal Structure of Mutant Chlorite Dismutase from Candidatus Nitrospira defluvii W145F in Complex with Cyanide
Descriptor: 1,2-ETHANEDIOL, CYANIDE ION, Chlorite dismutase, ...
Authors:Hagmueller, A, Gysel, K, Djinovic-Carugo, K.
Deposit date:2013-08-01
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Manipulating conserved heme cavity residues of chlorite dismutase: effect on structure, redox chemistry, and reactivity.
Biochemistry, 53, 2014
8TO1
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Escherichia coli RNA polymerase unwinding intermediate (I1a) at the lambda PR promoter
Descriptor: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Darst, S.A, Saecker, R.M, Mueller, A.U.
Deposit date:2023-08-02
Release date:2024-07-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy.
Nat.Struct.Mol.Biol., 2024
8TO6
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BU of 8to6 by Molmil
Escherichia coli RNA polymerase unwinding intermediate (I1d) at the lambda PR promoter
Descriptor: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Darst, S.A, Saecker, R.M, Mueller, A.U.
Deposit date:2023-08-02
Release date:2024-07-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy.
Nat.Struct.Mol.Biol., 2024
8TO8
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BU of 8to8 by Molmil
Escherichia coli RNA polymerase unwinding intermediate (I1b) at the lambda PR promoter
Descriptor: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Darst, S.A, Saecker, R.M, Mueller, A.U.
Deposit date:2023-08-03
Release date:2024-07-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy.
Nat.Struct.Mol.Biol., 2024
8TOE
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BU of 8toe by Molmil
Escherichia coli RNA polymerase unwinding intermediate (I1c) at the lambda PR promoter
Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Darst, S.A, Saecker, R.M, Mueller, A.U.
Deposit date:2023-08-03
Release date:2024-07-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy.
Nat.Struct.Mol.Biol., 2024
8TOM
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BU of 8tom by Molmil
Escherichia coli RNA polymerase closed complex intermediate at the lambda PR promoter
Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Darst, S.A, Saecker, R.M, Mueller, A.U.
Deposit date:2023-08-03
Release date:2024-07-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy.
Nat.Struct.Mol.Biol., 2024
3C7A
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BU of 3c7a by Molmil
A structural basis for substrate and stereo selectivity in octopine dehydrogenase (ODH-NADH)
Descriptor: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Octopine dehydrogenase
Authors:Smits, S.H.J, Mueller, A, Schmitt, L, Grieshaber, M.K.
Deposit date:2008-02-07
Release date:2008-07-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A structural basis for substrate selectivity and stereoselectivity in octopine dehydrogenase from Pecten maximus.
J.Mol.Biol., 381, 2008
3IQD
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BU of 3iqd by Molmil
Structure of Octopine-dehydrogenase in complex with NADH and Agmatine
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, AGMATINE, Octopine dehydrogenase
Authors:Smits, S.H.J, Meyer, T, Mueller, A, Willbold, D, Grieshaber, M.K, Schmitt, L.
Deposit date:2009-08-20
Release date:2010-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Insights into the mechanism of ligand binding to octopine dehydrogenase from Pecten maximus by NMR and crystallography
Plos One, 5, 2010
3C7D
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A structural basis for substrate and stereo selectivity in octopine dehydrogenase (ODH-NADH-Pyruvate)
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Octopine dehydrogenase, PYRUVIC ACID
Authors:Smits, S.H.J, Mueller, A, Schmitt, L, Grieshaber, M.K.
Deposit date:2008-02-07
Release date:2008-07-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A structural basis for substrate selectivity and stereoselectivity in octopine dehydrogenase from Pecten maximus.
J.Mol.Biol., 381, 2008
3C7C
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A structural basis for substrate and stereo selectivity in octopine dehydrogenase (ODH-NADH-L-Arginine)
Descriptor: ARGININE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Octopine dehydrogenase
Authors:Smits, S.H.J, Mueller, A, Schmitt, L, Grieshaber, M.K.
Deposit date:2008-02-07
Release date:2008-07-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A structural basis for substrate selectivity and stereoselectivity in octopine dehydrogenase from Pecten maximus.
J.Mol.Biol., 381, 2008
3C65
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Crystal Structure of Bacillus stearothermophilus UvrC 5' endonuclease domain
Descriptor: UvrABC system protein C
Authors:Pakotiprapha, D, Bowman, B.R, Mueller, A.A, Inuzuka, Y, Verdine, G.L.
Deposit date:2008-02-02
Release date:2008-08-05
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Bacillus stearothermophilus UvrC 5' endonuclease domain
To be Published
2MAI
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BU of 2mai by Molmil
NMR structure of lassomycin
Descriptor: Lassomycin
Authors:Gavrish, E, Sit, C.S, Kandror, O, Spoering, A, Peoples, A, Ling, L, Fetterman, A, Hughes, D, Cao, S, Bissell, A, Torrey, H, Akopian, T, Mueller, A, Epstein, S, Goldberg, A, Clardy, J, Lewis, K.
Deposit date:2013-07-09
Release date:2014-05-07
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Lassomycin, a Ribosomally Synthesized Cyclic Peptide, Kills Mycobacterium tuberculosis by Targeting the ATP-Dependent Protease ClpC1P1P2.
Chem.Biol., 21, 2014
3PRK
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BU of 3prk by Molmil
INHIBITION OF PROTEINASE K BY METHOXYSUCCINYL-ALA-ALA-PRO-ALA-CHLOROMETHYL KETONE. AN X-RAY STUDY AT 2.2-ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, METHOXYSUCCINYL-ALA-ALA-PRO-ALA-CHLOROMETHYL KETONE, PROTEINASE K
Authors:Wolf, W.M, Bajorath, J, Mueller, A, Raghunathan, S, Singh, T.P, Hinrichs, W, Saenger, W.
Deposit date:1991-08-07
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Inhibition of proteinase K by methoxysuccinyl-Ala-Ala-Pro-Ala-chloromethyl ketone. An x-ray study at 2.2-A resolution.
J.Biol.Chem., 266, 1991
6HNG
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Peptide-membrane interaction between targeting and lysis
Descriptor: LYS-LEU-LEU-LYS-LEU-LEU-LYS-LYS-LEU-LEU-LYS-LEU-LEU-LYS-NHE
Authors:Schneider, G, Blatter, M, Mueller, A.
Deposit date:2018-09-14
Release date:2018-10-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Peptide-membrane interaction between targeting and lysis
To Be Published

 

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