Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 58 results

1QFL
DownloadVisualize
BU of 1qfl by Molmil
BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA IN COMPLEX WITH A REACTION INTERMEDIATE.
Descriptor: COENZYME A, PROTEIN (ACETOACETYL-COA THIOLASE), SULFATE ION
Authors:Modis, Y, Wierenga, R.K.
Deposit date:1999-04-12
Release date:2000-04-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:A biosynthetic thiolase in complex with a reaction intermediate: the crystal structure provides new insights into the catalytic mechanism.
Structure Fold.Des., 7, 1999
3J0A
DownloadVisualize
BU of 3j0a by Molmil
Homology model of human Toll-like receptor 5 fitted into an electron microscopy single particle reconstruction
Descriptor: Toll-like receptor 5, alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Modis, Y, Zhou, K, Kanai, R, Lee, P, Wang, H.W.
Deposit date:2011-06-02
Release date:2011-12-28
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (26 Å)
Cite:Toll-like receptor 5 forms asymmetric dimers in the absence of flagellin.
J.Struct.Biol., 177, 2012
1I31
DownloadVisualize
BU of 1i31 by Molmil
MU2 ADAPTIN SUBUNIT (AP50) OF AP2 CLATHRIN ADAPTOR, COMPLEXED WITH EGFR INTERNALIZATION PEPTIDE FYRALM AT 2.5 A RESOLUTION
Descriptor: CLATHRIN COAT ASSEMBLY PROTEIN AP50, EPIDERMAL GROWTH FACTOR RECEPTOR
Authors:Modis, Y, Boll, W, Rapoport, I, Kirchhausen, T.
Deposit date:2001-02-12
Release date:2001-02-21
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:MU2 ADAPTIN SUBUNIT (AP50) OF AP2 CLATHRIN ADAPTOR, COMPLEXED WITH EGFR INTERNALIZATION PEPTIDE FYRALM AT 2.5 A RESOLUTION
To be Published
1UZG
DownloadVisualize
BU of 1uzg by Molmil
CRYSTAL STRUCTURE OF THE DENGUE TYPE 3 VIRUS ENVELOPE PROTEIN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAJOR ENVELOPE PROTEIN E, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Modis, Y, Harrison, S.C.
Deposit date:2004-03-11
Release date:2005-03-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Variable Surface Epitopes in the Crystal Structure of Dengue Virus Type 3 Envelope Glycoprotein
J.Virol., 79, 2005
3G7T
DownloadVisualize
BU of 3g7t by Molmil
Crystal structure of dengue virus type 1 envelope protein in the postfusion conformation
Descriptor: CHLORIDE ION, Envelope protein
Authors:Modis, Y.
Deposit date:2009-02-10
Release date:2009-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of dengue virus type 1 envelope protein in the postfusion conformation and its implications for membrane fusion.
J.Virol., 83, 2009
1OK8
DownloadVisualize
BU of 1ok8 by Molmil
Crystal structure of the dengue 2 virus envelope glycoprotein in the postfusion conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, MAJOR ENVELOPE PROTEIN E
Authors:Modis, Y, Harrison, S.C.
Deposit date:2003-07-19
Release date:2004-01-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Dengue Virus Envelope Protein After Membrane Fusion
Nature, 427, 2004
1OAN
DownloadVisualize
BU of 1oan by Molmil
Crystal structure of the dengue 2 virus envelope protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ENVELOPE GLYCOPROTEIN, SODIUM ION, ...
Authors:Modis, Y, Harrison, S.C.
Deposit date:2003-01-16
Release date:2003-05-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A Ligand-Binding Pocket in the Dengue Virus Envelope Glycoprotein
Proc.Natl.Acad.Sci.USA, 100, 2003
1DLV
DownloadVisualize
BU of 1dlv by Molmil
BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA IN COMPLEX WITH COA
Descriptor: BIOSYNTHETIC THIOLASE, COENZYME A, SULFATE ION
Authors:Modis, Y, Wierenga, R.K.
Deposit date:1999-12-12
Release date:2000-04-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystallographic analysis of the reaction pathway of Zoogloea ramigera biosynthetic thiolase.
J.Mol.Biol., 297, 2000
1OKE
DownloadVisualize
BU of 1oke by Molmil
Crystal structure of the dengue 2 virus envelope protein in complex with n-octyl-beta-D-glucoside
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAJOR ENVELOPE PROTEIN E, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Modis, Y, Harrison, S.C.
Deposit date:2003-07-22
Release date:2003-07-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A Ligand-Binding Pocket in the Dengue Virus Envelope Glycoprotein.
Proc.Natl.Acad.Sci.USA, 100, 2003
1DLU
DownloadVisualize
BU of 1dlu by Molmil
UNLIGANDED BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, BIOSYNTHETIC THIOLASE, SULFATE ION
Authors:Modis, Y, Wierenga, R.K.
Deposit date:1999-12-12
Release date:2000-04-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystallographic analysis of the reaction pathway of Zoogloea ramigera biosynthetic thiolase.
J.Mol.Biol., 297, 2000
1DM3
DownloadVisualize
BU of 1dm3 by Molmil
ACETYLATED BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA IN COMPLEX WITH ACETYL-COA
Descriptor: ACETYL COENZYME *A, BIOSYNTHETIC THIOLASE ACETYLATED AT CYS89, SULFATE ION
Authors:Modis, Y, Wierenga, R.K.
Deposit date:1999-12-13
Release date:2001-08-29
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic analysis of the reaction pathway of Zoogloea ramigera biosynthetic thiolase.
J.Mol.Biol., 297, 2000
4ILD
DownloadVisualize
BU of 4ild by Molmil
Crystal structure of truncated Bovine viral diarrhea virus 1 E2 envelope protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Envelope glycoprotein E2, ...
Authors:Modis, Y, Li, Y, Wang, J.
Deposit date:2012-12-30
Release date:2013-04-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Crystal structure of glycoprotein E2 from bovine viral diarrhea virus.
Proc.Natl.Acad.Sci.USA, 110, 2013
1DCI
DownloadVisualize
BU of 1dci by Molmil
DIENOYL-COA ISOMERASE
Descriptor: 1,2-ETHANEDIOL, DIENOYL-COA ISOMERASE, MAGNESIUM ION, ...
Authors:Modis, Y, Filppula, S.A, Novikov, D, Norledge, B, Hiltunen, J.K, Wierenga, R.K.
Deposit date:1998-02-13
Release date:1999-03-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of dienoyl-CoA isomerase at 1.5 A resolution reveals the importance of aspartate and glutamate sidechains for catalysis.
Structure, 6, 1998
5OFA
DownloadVisualize
BU of 5ofa by Molmil
Crystal structure of human MORC2 (residues 1-603) with spinal muscular atrophy mutation T424R
Descriptor: MAGNESIUM ION, MORC family CW-type zinc finger protein 2, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Douse, C.H, Liu, Y, Modis, Y.
Deposit date:2017-07-10
Release date:2018-02-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Neuropathic MORC2 mutations perturb GHKL ATPase dimerization dynamics and epigenetic silencing by multiple structural mechanisms.
Nat Commun, 9, 2018
8QFB
DownloadVisualize
BU of 8qfb by Molmil
Crystal structure of human MPP8 C-terminal region (residues 565-860)
Descriptor: M-phase phosphoprotein 8
Authors:Prigozhin, D.M, Modis, Y.
Deposit date:2023-09-04
Release date:2024-09-11
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Structure and methyl-lysine binding selectivity of the HUSH complex subunit MPP8
to be published
7Z36
DownloadVisualize
BU of 7z36 by Molmil
Crystal structure of the KAP1 tripartite motif in complex with the ZNF93 KRAB domain
Descriptor: Endolysin,Transcription intermediary factor 1-beta,Isoform 2 of Transcription intermediary factor 1-beta, SMARCAD1 CUE1 domain, ZINC ION, ...
Authors:Stoll, G.A, Modis, Y.
Deposit date:2022-03-01
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and functional mapping of the KRAB-KAP1 repressor complex.
Embo J., 41, 2022
5ELX
DownloadVisualize
BU of 5elx by Molmil
S. cerevisiae Dbp5 bound to RNA and mant-ADP BeF3
Descriptor: ATP-dependent RNA helicase DBP5, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Merchant, M.K, Modis, Y.
Deposit date:2015-11-05
Release date:2016-02-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Pi Release Limits the Intrinsic and RNA-Stimulated ATPase Cycles of DEAD-Box Protein 5 (Dbp5).
J.Mol.Biol., 428, 2016
3NSW
DownloadVisualize
BU of 3nsw by Molmil
Crystal Structure of Ancylostoma ceylanicum Excretory-Secretory Protein 2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Excretory-secretory protein 2
Authors:Kucera, K, Modis, Y.
Deposit date:2010-07-02
Release date:2011-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Ancylostoma ceylanicum Excretory-Secretory Protein 2 Adopts a Netrin-Like Fold and Defines a Novel Family of Nematode Proteins.
J.Mol.Biol., 408, 2011
3TS9
DownloadVisualize
BU of 3ts9 by Molmil
Crystal Structure of the MDA5 Helicase Insert Domain
Descriptor: Interferon-induced helicase C domain-containing protein 1, SULFATE ION
Authors:Berke, I.C, Modis, Y.
Deposit date:2011-09-12
Release date:2012-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:MDA5 cooperatively forms dimers and ATP-sensitive filaments upon binding double-stranded RNA.
Embo J., 31, 2012
6QAJ
DownloadVisualize
BU of 6qaj by Molmil
Structure of the tripartite motif of KAP1/TRIM28
Descriptor: Endolysin,Transcription intermediary factor 1-beta, ZINC ION
Authors:Stoll, G.A, Oda, S, Yu, M, Modis, Y.
Deposit date:2018-12-19
Release date:2019-07-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Structure of KAP1 tripartite motif identifies molecular interfaces required for retroelement silencing.
Proc.Natl.Acad.Sci.USA, 116, 2019
5OF9
DownloadVisualize
BU of 5of9 by Molmil
Crystal structure of human MORC2 (residues 1-603)
Descriptor: MAGNESIUM ION, MORC family CW-type zinc finger protein 2, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Douse, C.H, Shamin, M, Modis, Y.
Deposit date:2017-07-10
Release date:2018-02-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.807 Å)
Cite:Neuropathic MORC2 mutations perturb GHKL ATPase dimerization dynamics and epigenetic silencing by multiple structural mechanisms.
Nat Commun, 9, 2018
2I69
DownloadVisualize
BU of 2i69 by Molmil
Crystal structure of the West Nile virus envelope glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Polyprotein
Authors:Kanai, R, Modis, Y.
Deposit date:2006-08-28
Release date:2006-11-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Crystal structure of west nile virus envelope glycoprotein reveals viral surface epitopes.
J.Virol., 80, 2006
5OFB
DownloadVisualize
BU of 5ofb by Molmil
Crystal structure of human MORC2 (residues 1-603) with spinal muscular atrophy mutation S87L
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MORC family CW-type zinc finger protein 2, ...
Authors:Douse, C.H, Liu, Y, Modis, Y.
Deposit date:2017-07-10
Release date:2018-02-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Neuropathic MORC2 mutations perturb GHKL ATPase dimerization dynamics and epigenetic silencing by multiple structural mechanisms.
Nat Commun, 9, 2018
3NEC
DownloadVisualize
BU of 3nec by Molmil
Crystal Structure of Toxoplasma gondii Profilin
Descriptor: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Inflammatory profilin, SULFATE ION
Authors:Kucera, K, Modis, Y.
Deposit date:2010-06-08
Release date:2010-09-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-based analysis of Toxoplasma gondii profilin: a parasite-specific motif is required for recognition by Toll-like receptor 11.
J.Mol.Biol., 403, 2010
7NIQ
DownloadVisualize
BU of 7niq by Molmil
CryoEM structure of disease related M854K MDA5-dsRNA filament in complex with ADP-AlF4(Major class)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*AP*UP*CP*UP*CP*CP*UP*CP*GP*GP*CP*UP*UP*G)-3'), ...
Authors:Yu, Q, Modis, Y.
Deposit date:2021-02-13
Release date:2021-11-17
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:MDA5 disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA.
Nat Commun, 12, 2021

 

123>

226707

건을2024-10-30부터공개중

PDB statisticsPDBj update infoContact PDBjnumon